Query Modification in Object-oriented Database Federation

We discuss the modification of queries against an integrated view in a federation of object-oriented databases. We present a generalisation of existing algorithms for simple global query processing that works for arbitrarily defined integration classes. We then extend this algorithm to deal with object-oriented features such as queries involving path expressions and nesting. We show how properties of the OO-style of modelling relationships through object references can be exploited to reduce the number of subqueries necessary to evaluate such querie

Integrity Constraint Checking in Federated Databases

A federated database is comprised of multiple interconnected databases that cooperate in an autonomous fashion. Global integrity constraints are very useful in federated databases, but the lack of global queries, global transaction mechanisms, and global concurrency control renders traditional constraint management techniques inapplicable. The paper presents a threefold contribution to integrity constraint checking in federated databases: (1) the problem of constraint checking in a federated database environment is clearly formulated; (2) a family of cooperative protocols for constraint checking is presented; (3) the differences across protocols in the family are analyzed with respect to system requirements, properties guaranteed, and costs involved. Thus, we provide a suite of options with protocols for various environments with specific system capabilities and integrity requirement

A Data Transformation System for Biological Data Sources

Scientific data of importance to biologists in the Human Genome Project resides not only in conventional databases, but in structured files maintained in a number of different formats (e.g. ASN.1 and ACE) as well a.s sequence analysis packages (e.g. BLAST and FASTA). These formats and packages contain a number of data types not found in conventional databases, such as lists and variants, and may be deeply nested. We present in this paper techniques for querying and transforming such data, and illustrate their use in a prototype system developed in conjunction with the Human Genome Center for Chromosome 22. We also describe optimizations performed by the system, a crucial issue for bulk data

Introducing Dynamic Behavior in Amalgamated Knowledge Bases

The problem of integrating knowledge from multiple and heterogeneous sources is a fundamental issue in current information systems. In order to cope with this problem, the concept of mediator has been introduced as a software component providing intermediate services, linking data resources and application programs, and making transparent the heterogeneity of the underlying systems. In designing a mediator architecture, we believe that an important aspect is the definition of a formal framework by which one is able to model integration according to a declarative style. To this purpose, the use of a logical approach seems very promising. Another important aspect is the ability to model both static integration aspects, concerning query execution, and dynamic ones, concerning data updates and their propagation among the various data sources. Unfortunately, as far as we know, no formal proposals for logically modeling mediator architectures both from a static and dynamic point of view have already been developed. In this paper, we extend the framework for amalgamated knowledge bases, presented by Subrahmanian, to deal with dynamic aspects. The language we propose is based on the Active U-Datalog language, and extends it with annotated logic and amalgamation concepts. We model the sources of information and the mediator (also called supervisor) as Active U-Datalog deductive databases, thus modeling queries, transactions, and active rules, interpreted according to the PARK semantics. By using active rules, the system can efficiently perform update propagation among different databases. The result is a logical environment, integrating active and deductive rules, to perform queries and update propagation in an heterogeneous mediated framework.Comment: Other Keywords: Deductive databases; Heterogeneous databases; Active rules; Update

Using Visualization to Support Data Mining of Large Existing Databases

In this paper. we present ideas how visualization technology can be used to improve the difficult process of querying very large databases. With our VisDB system, we try to provide visual support not only for the query specification process. but also for evaluating query results and. thereafter, refining the query accordingly. The main idea of our system is to represent as many data items as possible by the pixels of the display device. By arranging and coloring the pixels according to the relevance for the query, the user gets a visual impression of the resulting data set and of its relevance for the query. Using an interactive query interface, the user may change the query dynamically and receives immediate feedback by the visual representation of the resulting data set. By using multiple windows for different parts of the query, the user gets visual feedback for each part of the query and, therefore, may easier understand the overall result. To support complex queries, we introduce the notion of approximate joins which allow the user to find data items that only approximately fulfill join conditions. We also present ideas how our technique may be extended to support the interoperation of heterogeneous databases. Finally, we discuss the performance problems that are caused by interfacing to existing database systems and present ideas to solve these problems by using data structures supporting a multidimensional search of the database

Open issues in semantic query optimization in relational DBMS

After two decades of research into Semantic Query Optimization (SQO) there is clear agreement as to the efficacy of SQO. However, although there are some experimental implementations there are still no commercial implementations. We first present a thorough analysis of research into SQO. We identify three problems which inhibit the effective use of SQO in Relational Database Management Systems(RDBMS). We then propose solutions to these problems and describe first steps towards the implementation of an effective semantic query optimizer for relational databases