A Qualitative Representation of Spatial Scenes in R2 with Regions and Lines

Regions and lines are common geographic abstractions for geographic objects. Collections of regions, lines, and other representations of spatial objects form a spatial scene, along with their relations. For instance, the states of Maine and New Hampshire can be represented by a pair of regions and related based on their topological properties. These two states are adjacent (i.e., they meet along their shared boundary), whereas Maine and Florida are not adjacent (i.e., they are disjoint). A detailed model for qualitatively describing spatial scenes should capture the essential properties of a configuration such that a description of the represented objects and their relations can be generated. Such a description should then be able to reproduce a scene in a way that preserves all topological relationships, but without regards to metric details. Coarse approaches to qualitative spatial reasoning may underspecify certain relations. For example, if two objects meet, it is unclear if they meet along an edge, at a single point, or multiple times along their boundaries. Where the boundaries of spatial objects converge, this is called a spatial intersection. This thesis develops a model for spatial scene descriptions primarily through sequences of detailed spatial intersections and object containment, capturing how complex spatial objects relate. With a theory of complex spatial scenes developed, a tool that will automatically generate a formal description of a spatial scene is prototyped, enabling the described objects to be analyzed. The strengths and weaknesses of the provided model will be discussed relative to other models of spatial scene description, along with further refinements

Exploring GRIA2 Sequence Variations Using Virtual Reality

The effective visualization and presentation of biological data is of critical importance to research scientists. The increasing rate at which experiments generate data has only exacerbated the problem. While bioinformatics datasets continue to increase in size and complexity, the shift to adopt new user interface (UI) paradigms has historically lagged. Consequently, a major bottleneck for analysis of next-generation sequencing data is the continued use of UIs primarily inspired from the 1990’s through the early 2000’s. This paper presents the novel use of virtual reality (VR) as a medium for visualizing genomic, transcriptomic and proteomic data. Using the Gria2 (GluR2 or GluA2) gene and its associated gene products as our main objects of interest, we present Gria2-Viewer, a proof of concept software tool for visualizing any gene variant within the Gria2 locus. For any given genomic or transcriptomic variant of Gria2, we can quickly visualize its position on the protein subunit, rendered as a secondary structure. We also present a design for an experimental case study which compares our software versus a “traditional” workstation for ascertaining the severity of any Gria2 variant and its location within a 3d representation of the protein

Shallow-water benthic habitats of St. John, U.S. Virgin Islands

Coral reef ecosystems of the Virgin Islands Coral Reef National Monument, Virgin Islands National Park and the surrounding waters of St. John, U.S. Virgin Islands are a precious natural resource worthy of special protection and conservation. The mosaic of habitats including coral reefs, seagrasses and mangroves, are home to a diversity of marine organisms. These benthic habitats and their associated inhabitants provide many important ecosystem services to the community of St. John, such as fishing, tourism and shoreline protection. However, coral reef ecosystems throughout the U.S. Caribbean are under increasing pressure from environmental and anthropogenic stressors that threaten to destroy the natural heritage of these marine habitats. Mapping of benthic habitats is an integral component of any effective ecosystem-based management approach. Through the implementation of a multi-year interagency agreement, NOAA’s Center for Coastal Monitoring and Assessment - Biogeography Branch and the U.S. National Park Service (NPS) have completed benthic habitat mapping, field validation and accuracy assessment of maps for the nearshore marine environment of St. John. This work is an expansion of ongoing mapping and monitoring efforts conducted by NOAA and NPS in the U.S. Caribbean and replaces previous NOAA maps generated by Kendall et al. (2001) for the waters around St. John. The use of standardized protocols enables the condition of the coral reef ecosystems around St. John to be evaluated in context to the rest of the Virgin Island Territories and other U.S. coral ecosystems. The products from this effort provide an accurate assessment of the abundance and distribution of marine habitats surrounding St. John to support more effective management and conservation of ocean resources within the National Park system. This report documents the entire process of benthic habitat mapping in St. John. Chapter 1 provides a description of the benthic habitat classification scheme used to categorize the different habitats existing in the nearshore environment. Chapter 2 describes the steps required to create a benthic habitat map from visual interpretation of remotely sensed imagery. Chapter 3 details the process of accuracy assessment and reports on the thematic accuracy of the final maps. Finally, Chapter 4 is a summary of the basic map content and compares the new maps to a previous NOAA effort. Benthic habitat maps of the nearshore marine environment of St. John, U.S. Virgin Islands were created by visual interpretation of remotely sensed imagery. Overhead imagery, including color orthophotography and IKONOS satellite imagery, proved to be an excellent source from which to visually interpret the location, extent and attributes of marine habitats. NOAA scientists were able to accurately and reliably delineate the boundaries of features on digital imagery using a Geographic Information System (GIS) and fi eld investigations. The St. John habitat classification scheme defined benthic communities on the basis of four primary coral reef ecosystem attributes: 1) broad geographic zone, 2) geomorphological structure type, 3) dominant biological cover, and 4) degree of live coral cover. Every feature in the benthic habitat map was assigned a designation at each level of the scheme. The ability to apply any component of this scheme was dependent on being able to identify and delineate a given feature in remotely sensed imagery

Quantum Gravity and Taoist Cosmology: Exploring the Ancient Origins of Phenomenological String Theory

In the author’s previous contribution to this journal (Rosen 2015), a phenomenological string theory was proposed based on qualitative topology and hypercomplex numbers. The current paper takes this further by delving into the ancient Chinese origin of phenomenological string theory. First, we discover a connection between the Klein bottle, which is crucial to the theory, and the Ho-t’u, a Chinese number archetype central to Taoist cosmology. The two structures are seen to mirror each other in expressing the psychophysical (phenomenological) action pattern at the heart of microphysics. But tackling the question of quantum gravity requires that a whole family of topological dimensions be brought into play. What we find in engaging with these structures is a closely related family of Taoist forebears that, in concert with their successors, provide a blueprint for cosmic evolution. Whereas conventional string theory accounts for the generation of nature’s fundamental forces via a notion of symmetry breaking that is essentially static and thus unable to explain cosmogony successfully, phenomenological/Taoist string theory entails the dialectical interplay of symmetry and asymmetry inherent in the principle of synsymmetry. This dynamic concept of cosmic change is elaborated on in the three concluding sections of the paper. Here, a detailed analysis of cosmogony is offered, first in terms of the theory of dimensional development and its Taoist (yin-yang) counterpart, then in terms of the evolution of the elemental force particles through cycles of expansion and contraction in a spiraling universe. The paper closes by considering the role of the analyst per se in the further evolution of the cosmos

Object Tracking in Vary Lighting Conditions for Fog based Intelligent Surveillance of Public Spaces

With rapid development of computer vision and artificial intelligence, cities are becoming more and more intelligent. Recently, since intelligent surveillance was applied in all kind of smart city services, object tracking attracted more attention. However, two serious problems blocked development of visual tracking in real applications. The first problem is its lower performance under intense illumination variation while the second issue is its slow speed. This paper addressed these two problems by proposing a correlation filter based tracker. Fog computing platform was deployed to accelerate the proposed tracking approach. The tracker was constructed by multiple positions' detections and alternate templates (MPAT). The detection position was repositioned according to the estimated speed of target by optical flow method, and the alternate template was stored with a template update mechanism, which were all computed at the edge. Experimental results on large-scale public benchmark datasets showed the effectiveness of the proposed method in comparison with state-of-the-art methods

Viral Possibilities: Media, the Body, and the Phenomenon of Infection

This thesis examines how the concept of virality is articulated in popular culture, and the connection that this articulation shares with notions of the virus in philosophical thought. The first chapter traces the emergence of a new wave of virus media following the geopolitical changes following the end of the Cold War, and the further shifts that have occurred in how the virus is culturally considered. The second chapter examines the politics of a phenomenological encounter with media depicting viruses. The third and final chapter discusses how understandings of the virus shape the notion of community as both a material and metaphysical construct