5D seismic data completion and denoising using a novel class of tensor decompositions

We have developed a novel strategy for simultaneous interpolation and denoising of prestack seismic data. Most seismic surveys fail to cover all possible source-receiver combinations, leading to missing data especially in the midpoint-offset domain. This undersampling can complicate certain data processing steps such as amplitude-variation-with-offset analysis and migration. Data interpolation can mitigate the impact of missing traces. We considered the prestack data as a 5D multidimensional array or otherwise referred to as a 5D tensor. Using synthetic data sets, we first found that prestack data can be well approximated by a low-rank tensor under a recently proposed framework for tensor singular value decomposition (tSVD). Under this low-rank assumption, we proposed a complexity-penalized algorithm for the recovery of missing traces and data denoising. In this algorithm, the complexity regularization was controlled by tuning a single regularization parameter using a statistical test. We tested the performance of the proposed algorithm on synthetic and real data to show that missing data can be reliably recovered under heavy downsampling. In addition, we demonstrated that compressibility, i.e., approximation of the data by a low-rank tensor, of seismic data under tSVD depended on the velocity model complexity and shot and receiver spacing. We further found that compressibility correlated with the recovery of missing data because high compressibility implied good recovery and vice versa.National Science Foundation (U.S.). Graduate Research Fellowship (Grant DGE-0806676)National Science Foundation (U.S.). Division of Computing and Communication Foundations (Grant NSF-1319653

Coherent Imaging through Multicore Fibres with Applications in Endoscopy

Imaging through optical fibres has recently emerged as a promising method of micro-scale optical imaging within a hair-thin form factor. This has significant applications in endoscopy and may enable minimally invasive imaging deep within live tissue for improved diagnosis of disease. Multi-mode fibres (MMF) are the most common choice because of their high resolution but multicore fibres (MCF) offer a number of advantages such as widespread clinical use, ability to form approximate images without correction and an inherently sparse transmission matrix (TM) enabling simple and fast characterisation. We present a novel experimental investigation into properties of MCF important for imaging, specifically: a new method to upsample and downsample measured TMs with minimal information loss, the first experimental measurement of MCF spatial eigenmodes, a novel statistical treatment of behaviour under bending based on a wireless fading model, and an experimental observation of TM drift due to self-heating effects and discussion of how to compensate this. We next present practical techniques for imaging through MCFs, including alignment, how to parallelise TM characterisation measurements to improve speed and how to use non-interferometric phase and polarisation recovery for improved stability. Finally, we present two recent applications of MCF imaging: polarimetric imaging using a robust Bayesian inference approach, and entropic imaging for imaging early-stage tumours

Blind deconvolution of medical ultrasound images: parametric inverse filtering approach

©2007 IEEE. Personal use of this material is permitted. However, permission to reprint/republish this material for advertising or promotional purposes or for creating new collective works for resale or distribution to servers or lists, or to reuse any copyrighted component of this work in other works must be obtained from the IEEE. This material is presented to ensure timely dissemination of scholarly and technical work. Copyright and all rights therein are retained by authors or by other copyright holders. All persons copying this information are expected to adhere to the terms and constraints invoked by each author's copyright. In most cases, these works may not be reposted without the explicit permission of the copyright holder.DOI: 10.1109/TIP.2007.910179The problem of reconstruction of ultrasound images by means of blind deconvolution has long been recognized as one of the central problems in medical ultrasound imaging. In this paper, this problem is addressed via proposing a blind deconvolution method which is innovative in several ways. In particular, the method is based on parametric inverse filtering, whose parameters are optimized using two-stage processing. At the first stage, some partial information on the point spread function is recovered. Subsequently, this information is used to explicitly constrain the spectral shape of the inverse filter. From this perspective, the proposed methodology can be viewed as a ldquohybridizationrdquo of two standard strategies in blind deconvolution, which are based on either concurrent or successive estimation of the point spread function and the image of interest. Moreover, evidence is provided that the ldquohybridrdquo approach can outperform the standard ones in a number of important practical cases. Additionally, the present study introduces a different approach to parameterizing the inverse filter. Specifically, we propose to model the inverse transfer function as a member of a principal shift-invariant subspace. It is shown that such a parameterization results in considerably more stable reconstructions as compared to standard parameterization methods. Finally, it is shown how the inverse filters designed in this way can be used to deconvolve the images in a nonblind manner so as to further improve their quality. The usefulness and practicability of all the introduced innovations are proven in a series of both in silico and in vivo experiments. Finally, it is shown that the proposed deconvolution algorithms are capable of improving the resolution of ultrasound images by factors of 2.24 or 6.52 (as judged by the autocorrelation criterion) depending on the type of regularization method used

Revisiting QRS detection methodologies for portable, wearable, battery-operated, and wireless ECG systems

Cardiovascular diseases are the number one cause of death worldwide. Currently, portable battery-operated systems such as mobile phones with wireless ECG sensors have the potential to be used in continuous cardiac function assessment that can be easily integrated into daily life. These portable point-of-care diagnostic systems can therefore help unveil and treat cardiovascular diseases. The basis for ECG analysis is a robust detection of the prominent QRS complex, as well as other ECG signal characteristics. However, it is not clear from the literature which ECG analysis algorithms are suited for an implementation on a mobile device. We investigate current QRS detection algorithms based on three assessment criteria: 1) robustness to noise, 2) parameter choice, and 3) numerical efficiency, in order to target a universal fast-robust detector. Furthermore, existing QRS detection algorithms may provide an acceptable solution only on small segments of ECG signals, within a certain amplitude range, or amid particular types of arrhythmia and/or noise. These issues are discussed in the context of a comparison with the most conventional algorithms, followed by future recommendations for developing reliable QRS detection schemes suitable for implementation on battery-operated mobile devices.Mohamed Elgendi, Björn Eskofier, Socrates Dokos, Derek Abbot

Development of Speech Command Control Based TinyML System for Post-Stroke Dysarthria Therapy Device

Post-stroke dysarthria (PSD) is a widespread outcome of a stroke. To help in the objective evaluation of dysarthria, the development of pathological voice recognition and technology has a lot of attention. Soft robotics therapy devices have been received as an alternative rehabilitation and hand grasp assistance for improving activity daily living (ADL). Despite the significant progress in this field, most soft robotic therapy devices use a complex, bulky, lack of pathological voice recognition model, large computational power, and stationary controller. This study aims to develop a portable wirelessly multi-controller with a simulated dysarthric vowel speech in Bahasa Indonesia and non-dysarthric micro speech recognition, using tiny machine learning (TinyMl) system for hardware efficiency. The speech interface using INMP441, compute with a lightweight Deep Convolutional Neural network (DCNN) design and embedded into ESP-32. Feature model using Short Time Fourier Transform (STFT) and fed into CNN. This method has proven useful in micro-speech recognition with low computational power in both speech scenarios with a level of accuracy above 90%. Realtime inference performance on ESP-32 using hand prosthetics, with 3-level household noise intensity respectively 24db,42db, and 62db, and has respectively resulted from 95%, 85%, and 50% Accuracy. Wireless connectivity success rate with both controllers is around 0.2 - 0.5 ms

Application of the Variational Mode Decomposition for Power Quality Analysis

Harmonics and interharmonics in power systems distort the grid voltage, deteriorate the quality and stability of the power grid. Therefore, rapid and accurate harmonic separation from the grid voltage is crucial to power system. In this article, a variational mode decomposition-based method is proposed to separate harmonics and interharmonics in the grid voltage. The method decomposes the voltage signal into fundamental, harmonic, interharmonic components through the frequency spectrum. An empirical mode decomposition (EMD) and an ensemble empirical mode decomposition (EEMD) can be combined with the independent component analysis (ICA) to analyze the harmonics and intherharmonics. By comparing EMD-ICA, EEMD-ICA methods, the proposed method has several advantages: (1) a higher correlation coefficient of all the components is found; (2) it requires much less time to accomplish signal separation; (3) amplitude, frequency, and phase angle are all retained by this method. The results obtained from both synthetic and real-life signals demonstrate the good performance of the proposed method

A Novel Deep Learning Technique for Morphology Preserved Fetal ECG Extraction from Mother ECG using 1D-CycleGAN

Monitoring the electrical pulse of fetal heart through a non-invasive fetal electrocardiogram (fECG) can easily detect abnormalities in the developing heart to significantly reduce the infant mortality rate and post-natal complications. Due to the overlapping of maternal and fetal R-peaks, the low amplitude of the fECG, systematic and ambient noises, typical signal extraction methods, such as adaptive filters, independent component analysis, empirical mode decomposition, etc., are unable to produce satisfactory fECG. While some techniques can produce accurate QRS waves, they often ignore other important aspects of the ECG. Our approach, which is based on 1D CycleGAN, can reconstruct the fECG signal from the mECG signal while maintaining the morphology due to extensive preprocessing and appropriate framework. The performance of our solution was evaluated by combining two available datasets from Physionet, "Abdominal and Direct Fetal ECG Database" and "Fetal electrocardiograms, direct and abdominal with reference heartbeat annotations", where it achieved an average PCC and Spectral-Correlation score of 88.4% and 89.4%, respectively. It detects the fQRS of the signal with accuracy, precision, recall and F1 score of 92.6%, 97.6%, 94.8% and 96.4%, respectively. It can also accurately produce the estimation of fetal heart rate and R-R interval with an error of 0.25% and 0.27%, respectively. The main contribution of our work is that, unlike similar studies, it can retain the morphology of the ECG signal with high fidelity. The accuracy of our solution for fetal heart rate and R-R interval length is comparable to existing state-of-the-art techniques. This makes it a highly effective tool for early diagnosis of fetal heart diseases and regular health checkups of the fetus.Comment: 24 pages, 11 figure