Wavelet-based denoising for 3D OCT images

Optical coherence tomography produces high resolution medical images based on spatial and temporal coherence of the optical waves backscattered from the scanned tissue. However, the same coherence introduces speckle noise as well; this degrades the quality of acquired images. In this paper we propose a technique for noise reduction of 3D OCT images, where the 3D volume is considered as a sequence of 2D images, i.e., 2D slices in depth-lateral projection plane. In the proposed method we first perform recursive temporal filtering through the estimated motion trajectory between the 2D slices using noise-robust motion estimation/compensation scheme previously proposed for video denoising. The temporal filtering scheme reduces the noise level and adapts the motion compensation on it. Subsequently, we apply a spatial filter for speckle reduction in order to remove the remainder of noise in the 2D slices. In this scheme the spatial (2D) speckle-nature of noise in OCT is modeled and used for spatially adaptive denoising. Both the temporal and the spatial filter are wavelet-based techniques, where for the temporal filter two resolution scales are used and for the spatial one four resolution scales. The evaluation of the proposed denoising approach is done on demodulated 3D OCT images on different sources and of different resolution. For optimizing the parameters for best denoising performance fantom OCT images were used. The denoising performance of the proposed method was measured in terms of SNR, edge sharpness preservation and contrast-to-noise ratio. A comparison was made to the state-of-the-art methods for noise reduction in 2D OCT images, where the proposed approach showed to be advantageous in terms of both objective and subjective quality measures

Electrocardiogram Baseline Wander Suppression Based on the Combination of Morphological and Wavelet Transformation Based Filtering

One of the major noise components in electrocardiogram (ECG) is the baseline wander (BW). Effective methods for suppressing BW include the wavelet-based (WT) and the mathematical morphological filtering-based (MMF)algorithms. However, the T waveform distortions introduced by the WTand the rectangular/trapezoidal distortions introduced by MMF degrade the quality of the output signal. Hence, in this study, we introduce a method by combining the MMF and WTto overcome the shortcomings of both existing methods. To demonstrate the effectiveness of the proposed method, artificial ECG signals containing a clinicalBW are used for numerical simulation, and we also create a realistic model of baseline wander to compare the proposed method with other state-of-the-art methods commonly used in the literature. /e results show that the BW suppression effect of the proposed method is better than that of the others. Also, the new method is capable of preserving the outline of the BW and avoiding waveform distortions caused by the morphology filter, thereby obtaining an enhanced quality of ECG

Rehaussement du signal de parole par EMD et opérateur de Teager-Kaiser

The authors would like to thank Professor Mohamed Bahoura from Universite de Quebec a Rimouski for fruitful discussions on time adaptive thresholdingIn this paper a speech denoising strategy based on time adaptive thresholding of intrinsic modes functions (IMFs) of the signal, extracted by empirical mode decomposition (EMD), is introduced. The denoised signal is reconstructed by the superposition of its adaptive thresholded IMFs. Adaptive thresholds are estimated using the Teager–Kaiser energy operator (TKEO) of signal IMFs. More precisely, TKEO identifies the type of frame by expanding differences between speech and non-speech frames in each IMF. Based on the EMD, the proposed speech denoising scheme is a fully data-driven approach. The method is tested on speech signals with different noise levels and the results are compared to EMD-shrinkage and wavelet transform (WT) coupled with TKEO. Speech enhancement performance is evaluated using output signal to noise ratio (SNR) and perceptual evaluation of speech quality (PESQ) measure. Based on the analyzed speech signals, the proposed enhancement scheme performs better than WT-TKEO and EMD-shrinkage approaches in terms of output SNR and PESQ. The noise is greatly reduced using time-adaptive thresholding than universal thresholding. The study is limited to signals corrupted by additive white Gaussian noise

Studies in Signal Processing Techniques for Speech Enhancement: A comparative study

Speech enhancement is very essential to suppress the background noise and to increase speech intelligibility and reduce fatigue in hearing. There exist many simple speech enhancement algorithms like spectral subtraction to complex algorithms like Bayesian Magnitude estimators based on Minimum Mean Square Error (MMSE) and its variants. A continuous research is going and new algorithms are emerging to enhance speech signal recorded in the background of environment such as industries, vehicles and aircraft cockpit. In aviation industries speech enhancement plays a vital role to bring crucial information from pilot’s conversation in case of an incident or accident by suppressing engine and other cockpit instrument noises. In this work proposed is a new approach to speech enhancement making use harmonic wavelet transform and Bayesian estimators. The performance indicators, SNR and listening confirms to the fact that newly modified algorithms using harmonic wavelet transform indeed show better results than currently existing methods. Further, the Harmonic Wavelet Transform is computationally efficient and simple to implement due to its inbuilt decimation-interpolation operations compared to those of filter-bank approach to realize sub-bands

Perceptually Motivated Wavelet Packet Transform for Bioacoustic Signal Enhancement

A significant and often unavoidable problem in bioacoustic signal processing is the presence of background noise due to an adverse recording environment. This paper proposes a new bioacoustic signal enhancement technique which can be used on a wide range of species. The technique is based on a perceptually scaled wavelet packet decomposition using a species-specific Greenwood scale function. Spectral estimation techniques, similar to those used for human speech enhancement, are used for estimation of clean signal wavelet coefficients under an additive noise model. The new approach is compared to several other techniques, including basic bandpass filtering as well as classical speech enhancement methods such as spectral subtraction, Wiener filtering, and Ephraim–Malah filtering. Vocalizations recorded from several species are used for evaluation, including the ortolan bunting (Emberiza hortulana), rhesus monkey (Macaca mulatta), and humpback whale (Megaptera novaeanglia), with both additive white Gaussian noise and environment recording noise added across a range of signal-to-noise ratios (SNRs). Results, measured by both SNR and segmental SNR of the enhanced wave forms, indicate that the proposed method outperforms other approaches for a wide range of noise conditions

Multiscale sub-octave wavelet transform for de-noising and enhancement

This paper describes an approach for accomplishing sub- octave wavelet analysis and its discrete implementation for noise reduction and feature enhancement. Sub-octave wavelet transforms allow us to more closely characterize features within distinct frequency bands. By dividing each octave into sub-octave components, we demonstrate a superior ability to capture transient activities in a signal or image more reliably. De-noising and enhancement are accomplished through techniques of minimizing noise energy and nonlinear processing of transform coefficient energy by gain

A proximal iteration for deconvolving Poisson noisy images using sparse representations

We propose an image deconvolution algorithm when the data is contaminated by Poisson noise. The image to restore is assumed to be sparsely represented in a dictionary of waveforms such as the wavelet or curvelet transforms. Our key contributions are: First, we handle the Poisson noise properly by using the Anscombe variance stabilizing transform leading to a {\it non-linear} degradation equation with additive Gaussian noise. Second, the deconvolution problem is formulated as the minimization of a convex functional with a data-fidelity term reflecting the noise properties, and a non-smooth sparsity-promoting penalties over the image representation coefficients (e.g. $\ell_1$-norm). Third, a fast iterative backward-forward splitting algorithm is proposed to solve the minimization problem. We derive existence and uniqueness conditions of the solution, and establish convergence of the iterative algorithm. Finally, a GCV-based model selection procedure is proposed to objectively select the regularization parameter. Experimental results are carried out to show the striking benefits gained from taking into account the Poisson statistics of the noise. These results also suggest that using sparse-domain regularization may be tractable in many deconvolution applications with Poisson noise such as astronomy and microscopy