16,404 research outputs found
Image Segmentation Using Weak Shape Priors
The problem of image segmentation is known to become particularly challenging
in the case of partial occlusion of the object(s) of interest, background
clutter, and the presence of strong noise. To overcome this problem, the
present paper introduces a novel approach segmentation through the use of
"weak" shape priors. Specifically, in the proposed method, an segmenting active
contour is constrained to converge to a configuration at which its geometric
parameters attain their empirical probability densities closely matching the
corresponding model densities that are learned based on training samples. It is
shown through numerical experiments that the proposed shape modeling can be
regarded as "weak" in the sense that it minimally influences the segmentation,
which is allowed to be dominated by data-related forces. On the other hand, the
priors provide sufficient constraints to regularize the convergence of
segmentation, while requiring substantially smaller training sets to yield less
biased results as compared to the case of PCA-based regularization methods. The
main advantages of the proposed technique over some existing alternatives is
demonstrated in a series of experiments.Comment: 27 pages, 8 figure
Active skeleton for bacteria modeling
The investigation of spatio-temporal dynamics of bacterial cells and their
molecular components requires automated image analysis tools to track cell
shape properties and molecular component locations inside the cells. In the
study of bacteria aging, the molecular components of interest are protein
aggregates accumulated near bacteria boundaries. This particular location makes
very ambiguous the correspondence between aggregates and cells, since computing
accurately bacteria boundaries in phase-contrast time-lapse imaging is a
challenging task. This paper proposes an active skeleton formulation for
bacteria modeling which provides several advantages: an easy computation of
shape properties (perimeter, length, thickness, orientation), an improved
boundary accuracy in noisy images, and a natural bacteria-centered coordinate
system that permits the intrinsic location of molecular components inside the
cell. Starting from an initial skeleton estimate, the medial axis of the
bacterium is obtained by minimizing an energy function which incorporates
bacteria shape constraints. Experimental results on biological images and
comparative evaluation of the performances validate the proposed approach for
modeling cigar-shaped bacteria like Escherichia coli. The Image-J plugin of the
proposed method can be found online at http://fluobactracker.inrialpes.fr.Comment: Published in Computer Methods in Biomechanics and Biomedical
Engineering: Imaging and Visualizationto appear i
A Generic Framework for Tracking Using Particle Filter With Dynamic Shape Prior
©2007 IEEE. Personal use of this material is permitted. However, permission to reprint/republish this material for advertising or promotional purposes or for creating new collective works for resale or distribution to servers or lists, or to reuse any copyrighted component of this work in other works must be obtained from the IEEE. This material is presented to ensure timely dissemination of scholarly and technical work. Copyright and all rights therein are retained by authors or by other copyright holders. All persons copying this information are expected to adhere to the terms and constraints invoked by each author's copyright. In most cases, these works may not be reposted without the explicit permission of the copyright holder.DOI: 10.1109/TIP.2007.894244Tracking deforming objects involves estimating the global motion of the object and its local deformations as functions of time. Tracking algorithms using Kalman filters or particle filters (PFs) have been proposed for tracking such objects, but these have limitations due to the lack of dynamic shape information. In this paper, we propose a novel method based on employing a locally linear embedding in order to incorporate dynamic shape information into the particle filtering framework for tracking highly deformable objects in the presence of noise and clutter. The PF also models image statistics such as mean and variance of the given data which can be useful in obtaining proper separation of object and backgroun
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