CNN AND LSTM FOR THE CLASSIFICATION OF PARKINSON'S DISEASE BASED ON THE GTCC AND MFCC

Parkinson's disease is a recognizable clinical syndrome with a variety of causes and clinical presentations; it represents a rapidly growing neurodegenerative disorder. Since about 90 percent of Parkinson's disease sufferers have some form of early speech impairment, recent studies on tele diagnosis of Parkinson's disease have focused on the recognition of voice impairments from vowel phonations or the subjects' discourse. In this paper, we present a new approach for Parkinson's disease detection from speech sounds that are based on CNN and LSTM and uses two categories of characteristics Mel Frequency Cepstral Coefficients (MFCC) and Gammatone Cepstral Coefficients (GTCC) obtained from noise-removed speech signals with comparative EMD-DWT and DWT-EMD analysis. The proposed model is divided into three stages. In the first step, noise is removed from the signals using the EMD-DWT and DWT-EMD methods. In the second step, the GTCC and MFCC are extracted from the enhanced audio signals. The classification process is carried out in the third step by feeding these features into the LSTM and CNN models, which are designed to define sequential information from the extracted features. The experiments are performed using PC-GITA and Sakar datasets and 10-fold cross validation method, the highest classification accuracy for the Sakar dataset reached 100% for both EMD-DWT-GTCC-CNN and DWT-EMD-GTCC-CNN, and for the PC-GITA dataset, the accuracy is reached 100% for EMD-DWT-GTCC-CNN and 96.55% for DWT-EMD-GTCC-CNN. The results of this study indicate that the characteristics of GTCC are more appropriate and accurate for the assessment of PD than MFCC

Automatic Assessment Of Parkinson’s Disease Using Spontaneous Speech

Parkinson's disease is a neurodegenerative disease with a range of symptoms, including speech impairments. These can be detected with digital signal processing, since speech signals carry paralinguistic information, which means information beyond linguistic information. In this work, Parkinson's disease is being recognized from speech signals using machine learning methods while following the steps of a typical research of paralinguistic speech processing. The main goal of this work is to evaluate how different feature extractions and machine learning models are capable of recognizing Parkinson's disease from spontaneous speech. The literature research part of this work presents the stages of a typical paralinguistic speech processing pipeline and evaluates related studies and research. Based on the related studies, people with Parkinson's disease have recognizable features in their speech signals which can be used to assess the disease. Additionally, multitude of feature sets and classification models have been applied in the studies. In the research of this work, for feature extraction MFCCs and eGeMAPS features are used to extract useful information from audio signals. The features work as an input to three different machine learning models used in this study: support vector machine, random forest, and convolutional neural network. These machine learning models are used to identify Parkinson's disease from the monologues of PC-GITA corpus. The data from PC-GITA used in this study consists of around a minute long spontaneous speeches from a hundred people of healthy speaker and people with diagnosed Parkinson’s disease. The results of this work were evaluated with a speaker-independent cross-validation method, in which each speaker acts as test data for the machine learning model and the remaining speakers as the training data. The final accuracy of the model was obtained by calculating the average accuracy of all folds of one hundred speakers. The results of this work indicate that Parkinson's disease can be recognized from speech using machine learning methods. Convolutional neural network produced the best accuracy for MFCCs features with 67.40% classification accuracy (Parkinson’s patient versus healthy talker), while random forest produced 75.00% accuracy for eGeMAPS features. The low accuracies are explained by the complexity of spontaneous speech and the chosen machine learning methods

An algorithm for Parkinson's disease speech classification based on isolated words analysis

Introduction Automatic assessment of speech impairment is a cutting edge topic in Parkinson's disease (PD). Language disorders are known to occur several years earlier than typical motor symptoms, thus speech analysis may contribute to the early diagnosis of the disease. Moreover, the remote monitoring of dysphonia could allow achieving an effective follow-up of PD clinical condition, possibly performed in the home environment. Methods In this work, we performed a multi-level analysis, progressively combining features extracted from the entire signal, the voiced segments, and the on-set/off-set regions, leading to a total number of 126 features. Furthermore, we compared the performance of early and late feature fusion schemes, aiming to identify the best model configuration and taking advantage of having 25 isolated words pronounced by each subject. We employed data from the PC-GITA database (50 healthy controls and 50 PD patients) for validation and testing. Results We implemented an optimized k-Nearest Neighbours model for the binary classification of PD patients versus healthy controls. We achieved an accuracy of 99.4% in 10-fold cross-validation and 94.3% in testing on the PC-GITA database (average value of male and female subjects). Conclusion The promising performance yielded by our model confirms the feasibility of automatic assessment of PD using voice recordings. Moreover, a post-hoc analysis of the most relevant features discloses the option of voice processing using a simple smartphone application

Models and Analysis of Vocal Emissions for Biomedical Applications

The MAVEBA Workshop proceedings, held on a biannual basis, collect the scientific papers presented both as oral and poster contributions, during the conference. The main subjects are: development of theoretical and mechanical models as an aid to the study of main phonatory dysfunctions, as well as the biomedical engineering methods for the analysis of voice signals and images, as a support to clinical diagnosis and classification of vocal pathologies

Improving automatic detection of obstructive sleep apnea through nonlinear analysis of sustained speech

We present a novel approach for the detection of severe obstructive sleep apnea (OSA) based on patients' voices introducing nonlinear measures to describe sustained speech dynamics. Nonlinear features were combined with state-of-the-art speech recognition systems using statistical modeling techniques (Gaussian mixture models, GMMs) over cepstral parameterization (MFCC) for both continuous and sustained speech. Tests were performed on a database including speech records from both severe OSA and control speakers. A 10 % relative reduction in classification error was obtained for sustained speech when combining MFCC-GMM and nonlinear features, and 33 % when fusing nonlinear features with both sustained and continuous MFCC-GMM. Accuracy reached 88.5 % allowing the system to be used in OSA early detection. Tests showed that nonlinear features and MFCCs are lightly correlated on sustained speech, but uncorrelated on continuous speech. Results also suggest the existence of nonlinear effects in OSA patients' voices, which should be found in continuous speech

운율 정보를 이용한 마비말장애 음성 자동 검출 및 평가

학위논문 (석사) -- 서울대학교 대학원 : 인문대학 언어학과, 2020. 8. Minhwa Chung.말장애는 신경계 또는 퇴행성 질환에서 가장 빨리 나타나는 증 상 중 하나이다. 마비말장애는 파킨슨병, 뇌성 마비, 근위축성 측삭 경화증, 다발성 경화증 환자 등 다양한 환자군에서 나타난다. 마비말장애는 조음기관 신경의 손상으로 부정확한 조음을 주요 특징으로 가지고, 운율에도 영향을 미치는 것으로 보고된다. 선행 연구에서는 운율 기반 측정치를 비장애 발화와 마비말장애 발화를 구별하는 것에 사용했다. 임상 현장에서는 마비말장애에 대한 운율 기반 분석이 마비말장애를 진단하거나 장애 양상에 따른 알맞은 치료법을 준비하는 것에 도움이 될 것이다. 따라서 마비말장애가 운율에 영향을 미치는 양상뿐만 아니라 마비말장애의 운율 특징을 긴밀하게 살펴보는 것이 필요하다. 구체 적으로, 운율이 어떤 측면에서 마비말장애에 영향을 받는지, 그리고 운율 애가 장애 정도에 따라 어떻게 다르게 나타나는지에 대한 분석이 필요하다. 본 논문은 음높이, 음질, 말속도, 리듬 등 운율을 다양한 측면에 서 살펴보고, 마비말장애 검출 및 평가에 사용하였다. 추출된 운율 특징들은 몇 가지 특징 선택 알고리즘을 통해 최적화되어 머신러닝 기반 분류기의 입력값으로 사용되었다. 분류기의 성능은 정확도, 정밀도, 재현율, F1-점수로 평가되었다. 또한, 본 논문은 장애 중증도(경도, 중등도, 심도)에 따라 운율 정보 사용의 유용성을 분석하였다. 마지막으로, 장애 발화 수집이 어려운 만큼, 본 연구는 교차 언어 분류기를 사용하였다. 한국어와 영어 장애 발화가 훈련 셋으로 사용되었으며, 테스트셋으로는 각 목표 언어만이 사용되었다. 실험 결과는 다음과 같이 세 가지를 시사한다. 첫째, 운율 정보 를 사용하는 것은 마비말장애 검출 및 평가에 도움이 된다. MFCC 만을 사용했을 때와 비교했을 때, 운율 정보를 함께 사용하는 것이 한국어와 영어 데이터셋 모두에서 도움이 되었다. 둘째, 운율 정보는 평가에 특히 유용하다. 영어의 경우 검출과 평가에서 각각 1.82%와 20.6%의 상대적 정확도 향상을 보였다. 한국어의 경우 검출에서는 향상을 보이지 않았지만, 평가에서는 13.6%의 상대적 향상이 나타났다. 셋째, 교차 언어 분류기는 단일 언어 분류기보다 향상된 결과를 보인다. 실험 결과 교차언어 분류기는 단일 언어 분류기와 비교했을 때 상대적으로 4.12% 높은 정확도를 보였다. 이것은 특정 운율 장애는 범언어적 특징을 가지며, 다른 언어 데이터를 포함시켜 데이터가 부족한 훈련 셋을 보완할 수 있 음을 시사한다.One of the earliest cues for neurological or degenerative disorders are speech impairments. Individuals with Parkinsons Disease, Cerebral Palsy, Amyotrophic lateral Sclerosis, Multiple Sclerosis among others are often diagnosed with dysarthria. Dysarthria is a group of speech disorders mainly affecting the articulatory muscles which eventually leads to severe misarticulation. However, impairments in the suprasegmental domain are also present and previous studies have shown that the prosodic patterns of speakers with dysarthria differ from the prosody of healthy speakers. In a clinical setting, a prosodic-based analysis of dysarthric speech can be helpful for diagnosing the presence of dysarthria. Therefore, there is a need to not only determine how the prosody of speech is affected by dysarthria, but also what aspects of prosody are more affected and how prosodic impairments change by the severity of dysarthria. In the current study, several prosodic features related to pitch, voice quality, rhythm and speech rate are used as features for detecting dysarthria in a given speech signal. A variety of feature selection methods are utilized to determine which set of features are optimal for accurate detection. After selecting an optimal set of prosodic features we use them as input to machine learning-based classifiers and assess the performance using the evaluation metrics: accuracy, precision, recall and F1-score. Furthermore, we examine the usefulness of prosodic measures for assessing different levels of severity (e.g. mild, moderate, severe). Finally, as collecting impaired speech data can be difficult, we also implement cross-language classifiers where both Korean and English data are used for training but only one language used for testing. Results suggest that in comparison to solely using Mel-frequency cepstral coefficients, including prosodic measurements can improve the accuracy of classifiers for both Korean and English datasets. In particular, large improvements were seen when assessing different severity levels. For English a relative accuracy improvement of 1.82% for detection and 20.6% for assessment was seen. The Korean dataset saw no improvements for detection but a relative improvement of 13.6% for assessment. The results from cross-language experiments showed a relative improvement of up to 4.12% in comparison to only using a single language during training. It was found that certain prosodic impairments such as pitch and duration may be language independent. Therefore, when training sets of individual languages are limited, they may be supplemented by including data from other languages.1. Introduction 1 1.1. Dysarthria 1 1.2. Impaired Speech Detection 3 1.3. Research Goals & Outline 6 2. Background Research 8 2.1. Prosodic Impairments 8 2.1.1. English 8 2.1.2. Korean 10 2.2. Machine Learning Approaches 12 3. Database 18 3.1. English-TORGO 20 3.2. Korean-QoLT 21 4. Methods 23 4.1. Prosodic Features 23 4.1.1. Pitch 23 4.1.2. Voice Quality 26 4.1.3. Speech Rate 29 4.1.3. Rhythm 30 4.2. Feature Selection 34 4.3. Classification Models 38 4.3.1. Random Forest 38 4.3.1. Support Vector Machine 40 4.3.1 Feed-Forward Neural Network 42 4.4. Mel-Frequency Cepstral Coefficients 43 5. Experiment 46 5.1. Model Parameters 47 5.2. Training Procedure 48 5.2.1. Dysarthria Detection 48 5.2.2. Severity Assessment 50 5.2.3. Cross-Language 51 6. Results 52 6.1. TORGO 52 6.1.1. Dysarthria Detection 52 6.1.2. Severity Assessment 56 6.2. QoLT 57 6.2.1. Dysarthria Detection 57 6.2.2. Severity Assessment 58 6.1. Cross-Language 59 7. Discussion 62 7.1. Linguistic Implications 62 7.2. Clinical Applications 65 8. Conclusion 67 References 69 Appendix 76 Abstract in Korean 79Maste

MOBEEZE. Natural Interaction Technologies, Virtual Reality and Artificial Intelligence for Gait Disorders Analysis and Rehabilitation in Patients with Parkinson's Disease

Parkinson's Disease (PD) is the most common degenerative disorder after Alzheimer's disease. Generally affecting elderly groups, it has a strong limiting effect on physical functioning and performance of roles, vitality and general perception of health. Since the disease is progressive, the patient knows he's going to get worse. The deterioration is significant not only in mobility but also in pain, social isolation, and emotional reactions. Freezing is a phenomenon associated with this disease and it is characterized by a motor disorder that leaves the patient literally stuck to the ground. Mobeeze is designed with the main objective of providing health personnel with a tool to analyse, evaluate and monitor the progress of patients’ disorders as well as the personalization and adaptation of rehabilitation sessions in patients with Parkinson's disease. Based on the characteristics measured in real time which will allow the strengthening effects of rehabilitation and help to assimilate them in the long term. The creation of Mobeeze allows the constitution of a system of analysis and evaluation of march disorders in real time, through natural interaction, virtual reality and artificial intelligence. In this project, we will analyse if these non-invasive technologies reduce the stress induced to the patient when he is feeling evaluated

Multi-view representation learning via gcca for multimodal analysis of Parkinson's disease

Information from different bio-signals such as speech, handwriting, and gait have been used to monitor the state of Parkinson's disease (PD) patients, however, all the multimodal bio-signals may not always be available. We propose a method based on multi-view representation learning via generalized canonical correlation analysis (GCCA) for learning a representation of features extracted from handwriting and gait that can be used as a complement to speech-based features. Three different problems are addressed: classification of PD patients vs. healthy controls, prediction of the neurological state of PD patients according to the UPDRS score, and the prediction of a modified version of the Frenchay dysarthria assessment (m-FDA). According to the results, the proposed approach is suitable to improve the results in the addressed problems, specially in the prediction of the UPDRS, and m-FDA scores