6,450 research outputs found
Hybrid modeling, HMM/NN architectures, and protein applications
We describe a hybrid modeling approach where the parameters of a model are calculated and modulated by another model, typically a neural network (NN), to avoid both overfitting and underfitting. We develop the approach for the case of Hidden Markov Models (HMMs), by deriving a class of hybrid HMM/NN architectures. These architectures can be trained with unified algorithms that blend HMM dynamic programming with NN backpropagation. In the case of complex data, mixtures of HMMs or modulated HMMs must be used. NNs can then be applied both to the parameters of each single HMM, and to the switching or modulation of the models, as a function of input or context. Hybrid HMM/NN architectures provide a flexible NN parameterization for the control of model structure and complexity. At the same time, they can capture distributions that, in practice, are inaccessible to single HMMs. The HMM/NN hybrid approach is tested, in its simplest form, by constructing a model of the immunoglobulin protein family. A hybrid model is trained, and a multiple alignment derived, with less than a fourth of the number of parameters used with previous single HMMs
Learning to Attend, Copy, and Generate for Session-Based Query Suggestion
Users try to articulate their complex information needs during search
sessions by reformulating their queries. To make this process more effective,
search engines provide related queries to help users in specifying the
information need in their search process. In this paper, we propose a
customized sequence-to-sequence model for session-based query suggestion. In
our model, we employ a query-aware attention mechanism to capture the structure
of the session context. is enables us to control the scope of the session from
which we infer the suggested next query, which helps not only handle the noisy
data but also automatically detect session boundaries. Furthermore, we observe
that, based on the user query reformulation behavior, within a single session a
large portion of query terms is retained from the previously submitted queries
and consists of mostly infrequent or unseen terms that are usually not included
in the vocabulary. We therefore empower the decoder of our model to access the
source words from the session context during decoding by incorporating a copy
mechanism. Moreover, we propose evaluation metrics to assess the quality of the
generative models for query suggestion. We conduct an extensive set of
experiments and analysis. e results suggest that our model outperforms the
baselines both in terms of the generating queries and scoring candidate queries
for the task of query suggestion.Comment: Accepted to be published at The 26th ACM International Conference on
Information and Knowledge Management (CIKM2017
Deep learning in remote sensing: a review
Standing at the paradigm shift towards data-intensive science, machine
learning techniques are becoming increasingly important. In particular, as a
major breakthrough in the field, deep learning has proven as an extremely
powerful tool in many fields. Shall we embrace deep learning as the key to all?
Or, should we resist a 'black-box' solution? There are controversial opinions
in the remote sensing community. In this article, we analyze the challenges of
using deep learning for remote sensing data analysis, review the recent
advances, and provide resources to make deep learning in remote sensing
ridiculously simple to start with. More importantly, we advocate remote sensing
scientists to bring their expertise into deep learning, and use it as an
implicit general model to tackle unprecedented large-scale influential
challenges, such as climate change and urbanization.Comment: Accepted for publication IEEE Geoscience and Remote Sensing Magazin
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