2,519 research outputs found
Graph Theory and Networks in Biology
In this paper, we present a survey of the use of graph theoretical techniques
in Biology. In particular, we discuss recent work on identifying and modelling
the structure of bio-molecular networks, as well as the application of
centrality measures to interaction networks and research on the hierarchical
structure of such networks and network motifs. Work on the link between
structural network properties and dynamics is also described, with emphasis on
synchronization and disease propagation.Comment: 52 pages, 5 figures, Survey Pape
Communities in Networks
We survey some of the concepts, methods, and applications of community
detection, which has become an increasingly important area of network science.
To help ease newcomers into the field, we provide a guide to available
methodology and open problems, and discuss why scientists from diverse
backgrounds are interested in these problems. As a running theme, we emphasize
the connections of community detection to problems in statistical physics and
computational optimization.Comment: survey/review article on community structure in networks; published
version is available at
http://people.maths.ox.ac.uk/~porterm/papers/comnotices.pd
A Motif-based Mission Planning Method for UAV Swarms Considering Dynamic Reconfiguration
Influenced by complex terrain conditions of combat environments and constrained by the level of communication technology, communication among unmanned aerial vehicles (UAV) is greatly restricted. In light of this situation, mission planning for UAV swarms under limited communication has become a difficult problem. This paper introduces motifs as the basic unit of configuration and proposes a motif-based mission planning method considering dynamic reconfiguration. This method uses multidimensional dynamic list scheduling algorithm to generate a mission planning scheme based on the motif-based swarm configuration solution. Then it incorporates order preserved operators with NSGA-III algorithm to find Pareto front solutions of all possible mission planning schemes. The feasibility of this mission planning method is validated through a case study
Networks and the epidemiology of infectious disease
The science of networks has revolutionised research into the dynamics of interacting elements. It could be argued that epidemiology in particular has embraced the potential of network theory more than any other discipline. Here we review the growing body of research concerning the spread of infectious diseases on networks, focusing on the interplay between network theory and epidemiology. The review is split into four main sections, which examine: the types of network relevant to epidemiology; the multitude of ways these networks can be characterised; the statistical methods that can be applied to infer the epidemiological parameters on a realised network; and finally simulation and analytical methods to determine epidemic dynamics on a given network. Given the breadth of areas covered and the ever-expanding number of publications, a comprehensive review of all work is impossible. Instead, we provide a personalised overview into the areas of network epidemiology that have seen the greatest progress in recent years or have the greatest potential to provide novel insights. As such, considerable importance is placed on analytical approaches and statistical methods which are both rapidly expanding fields. Throughout this review we restrict our attention to epidemiological issues
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