6,681 research outputs found
Fractals in the Nervous System: conceptual Implications for Theoretical Neuroscience
This essay is presented with two principal objectives in mind: first, to
document the prevalence of fractals at all levels of the nervous system, giving
credence to the notion of their functional relevance; and second, to draw
attention to the as yet still unresolved issues of the detailed relationships
among power law scaling, self-similarity, and self-organized criticality. As
regards criticality, I will document that it has become a pivotal reference
point in Neurodynamics. Furthermore, I will emphasize the not yet fully
appreciated significance of allometric control processes. For dynamic fractals,
I will assemble reasons for attributing to them the capacity to adapt task
execution to contextual changes across a range of scales. The final Section
consists of general reflections on the implications of the reviewed data, and
identifies what appear to be issues of fundamental importance for future
research in the rapidly evolving topic of this review
A Comprehensive Workflow for General-Purpose Neural Modeling with Highly Configurable Neuromorphic Hardware Systems
In this paper we present a methodological framework that meets novel
requirements emerging from upcoming types of accelerated and highly
configurable neuromorphic hardware systems. We describe in detail a device with
45 million programmable and dynamic synapses that is currently under
development, and we sketch the conceptual challenges that arise from taking
this platform into operation. More specifically, we aim at the establishment of
this neuromorphic system as a flexible and neuroscientifically valuable
modeling tool that can be used by non-hardware-experts. We consider various
functional aspects to be crucial for this purpose, and we introduce a
consistent workflow with detailed descriptions of all involved modules that
implement the suggested steps: The integration of the hardware interface into
the simulator-independent model description language PyNN; a fully automated
translation between the PyNN domain and appropriate hardware configurations; an
executable specification of the future neuromorphic system that can be
seamlessly integrated into this biology-to-hardware mapping process as a test
bench for all software layers and possible hardware design modifications; an
evaluation scheme that deploys models from a dedicated benchmark library,
compares the results generated by virtual or prototype hardware devices with
reference software simulations and analyzes the differences. The integration of
these components into one hardware-software workflow provides an ecosystem for
ongoing preparative studies that support the hardware design process and
represents the basis for the maturity of the model-to-hardware mapping
software. The functionality and flexibility of the latter is proven with a
variety of experimental results
A hierarchical anti-Hebbian network model for the formation of spatial cells in three-dimensional space.
Three-dimensional (3D) spatial cells in the mammalian hippocampal formation are believed to support the existence of 3D cognitive maps. Modeling studies are crucial to comprehend the neural principles governing the formation of these maps, yet to date very few have addressed this topic in 3D space. Here we present a hierarchical network model for the formation of 3D spatial cells using anti-Hebbian network. Built on empirical data, the model accounts for the natural emergence of 3D place, border, and grid cells, as well as a new type of previously undescribed spatial cell type which we call plane cells. It further explains the plausible reason behind the place and grid-cell anisotropic coding that has been observed in rodents and the potential discrepancy with the predicted periodic coding during 3D volumetric navigation. Lastly, it provides evidence for the importance of unsupervised learning rules in guiding the formation of higher-dimensional cognitive maps
Characterization and Compensation of Network-Level Anomalies in Mixed-Signal Neuromorphic Modeling Platforms
Advancing the size and complexity of neural network models leads to an ever
increasing demand for computational resources for their simulation.
Neuromorphic devices offer a number of advantages over conventional computing
architectures, such as high emulation speed or low power consumption, but this
usually comes at the price of reduced configurability and precision. In this
article, we investigate the consequences of several such factors that are
common to neuromorphic devices, more specifically limited hardware resources,
limited parameter configurability and parameter variations. Our final aim is to
provide an array of methods for coping with such inevitable distortion
mechanisms. As a platform for testing our proposed strategies, we use an
executable system specification (ESS) of the BrainScaleS neuromorphic system,
which has been designed as a universal emulation back-end for neuroscientific
modeling. We address the most essential limitations of this device in detail
and study their effects on three prototypical benchmark network models within a
well-defined, systematic workflow. For each network model, we start by defining
quantifiable functionality measures by which we then assess the effects of
typical hardware-specific distortion mechanisms, both in idealized software
simulations and on the ESS. For those effects that cause unacceptable
deviations from the original network dynamics, we suggest generic compensation
mechanisms and demonstrate their effectiveness. Both the suggested workflow and
the investigated compensation mechanisms are largely back-end independent and
do not require additional hardware configurability beyond the one required to
emulate the benchmark networks in the first place. We hereby provide a generic
methodological environment for configurable neuromorphic devices that are
targeted at emulating large-scale, functional neural networks
Stochastic firing rate models
We review a recent approach to the mean-field limits in neural networks that
takes into account the stochastic nature of input current and the uncertainty
in synaptic coupling. This approach was proved to be a rigorous limit of the
network equations in a general setting, and we express here the results in a
more customary and simpler framework. We propose a heuristic argument to derive
these equations providing a more intuitive understanding of their origin. These
equations are characterized by a strong coupling between the different moments
of the solutions. We analyse the equations, present an algorithm to simulate
the solutions of these mean-field equations, and investigate numerically the
equations. In particular, we build a bridge between these equations and
Sompolinsky and collaborators approach (1988, 1990), and show how the coupling
between the mean and the covariance function deviates from customary
approaches
The iso-response method
Throughout the nervous system, neurons integrate high-dimensional input streams and transform them into an output of their own. This integration of incoming signals involves filtering processes and complex non-linear operations. The shapes of these filters and non-linearities determine the computational features of single neurons and their functional roles within larger networks. A detailed characterization of signal integration is thus a central ingredient to understanding information processing in neural circuits. Conventional methods for measuring single-neuron response properties, such as reverse correlation, however, are often limited by the implicit assumption that stimulus integration occurs in a linear fashion. Here, we review a conceptual and experimental alternative that is based on exploring the space of those sensory stimuli that result in the same neural output. As demonstrated by recent results in the auditory and visual system, such iso-response stimuli can be used to identify the non-linearities relevant for stimulus integration, disentangle consecutive neural processing steps, and determine their characteristics with unprecedented precision. Automated closed-loop experiments are crucial for this advance, allowing rapid search strategies for identifying iso-response stimuli during experiments. Prime targets for the method are feed-forward neural signaling chains in sensory systems, but the method has also been successfully applied to feedback systems. Depending on the specific question, “iso-response” may refer to a predefined firing rate, single-spike probability, first-spike latency, or other output measures. Examples from different studies show that substantial progress in understanding neural dynamics and coding can be achieved once rapid online data analysis and stimulus generation, adaptive sampling, and computational modeling are tightly integrated into experiments
Inhibitory synchrony as a mechanism for attentional gain modulation
Recordings from area V4 of monkeys have revealed that when the focus of
attention is on a visual stimulus within the receptive field of a cortical
neuron, two distinct changes can occur: The firing rate of the neuron can
change and there can be an increase in the coherence between spikes and the
local field potential in the gamma-frequency range (30-50 Hz). The hypothesis
explored here is that these observed effects of attention could be a
consequence of changes in the synchrony of local interneuron networks. We
performed computer simulations of a Hodgkin-Huxley type neuron driven by a
constant depolarizing current, I, representing visual stimulation and a
modulatory inhibitory input representing the effects of attention via local
interneuron networks. We observed that the neuron's firing rate and the
coherence of its output spike train with the synaptic inputs was modulated by
the degree of synchrony of the inhibitory inputs. The model suggest that the
observed changes in firing rate and coherence of neurons in the visual cortex
could be controlled by top-down inputs that regulated the coherence in the
activity of a local inhibitory network discharging at gamma frequencies.Comment: J.Physiology (Paris) in press, 11 figure
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