1,216 research outputs found

    Text Mining Infrastructure in R

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    During the last decade text mining has become a widely used discipline utilizing statistical and machine learning methods. We present the tm package which provides a framework for text mining applications within R. We give a survey on text mining facilities in R and explain how typical application tasks can be carried out using our framework. We present techniques for count-based analysis methods, text clustering, text classification and string kernels.

    Computer-aided Semantic Signature Identification and Document Classification via Semantic Signatures

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    In this era of textual data explosion on the World Wide Web, it may be very hard to find documents that are similar to the documents that are of interest to us. To overcome this problem we have developed a type of semantic signature that captures the semantics of target content (text). Semantic signatures from a text/document of interest are derived using the software package semantic signature mining tool (SSMinT). This software package has been developed as a part of this thesis work in collaboration with Sri Ramya Peddada. These semantic signatures are used to search and retrieve documents with similar semantic patterns. Effects of different representations of semantic signatures on the document classification outcomes are illustrated. Retrieved document classification accuracies of Euclidean and Spherical K-means clustering algorithms are compared. A Chi-square test is presented to prove that the observed and expected numbers of documents retrieved (from a corpus) are not significantly different. From this Chi-square test it is proved that the semantic signature concept is capable of retrieving documents of interest with high probability. Our findings indicate that this concept has potential for use in commercial text/document searching applications

    Exploiting Latent Features of Text and Graphs

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    As the size and scope of online data continues to grow, new machine learning techniques become necessary to best capitalize on the wealth of available information. However, the models that help convert data into knowledge require nontrivial processes to make sense of large collections of text and massive online graphs. In both scenarios, modern machine learning pipelines produce embeddings --- semantically rich vectors of latent features --- to convert human constructs for machine understanding. In this dissertation we focus on information available within biomedical science, including human-written abstracts of scientific papers, as well as machine-generated graphs of biomedical entity relationships. We present the Moliere system, and our method for identifying new discoveries through the use of natural language processing and graph mining algorithms. We propose heuristically-based ranking criteria to augment Moliere, and leverage this ranking to identify a new gene-treatment target for HIV-associated Neurodegenerative Disorders. We additionally focus on the latent features of graphs, and propose a new bipartite graph embedding technique. Using our graph embedding, we advance the state-of-the-art in hypergraph partitioning quality. Having newfound intuition of graph embeddings, we present Agatha, a deep-learning approach to hypothesis generation. This system learns a data-driven ranking criteria derived from the embeddings of our large proposed biomedical semantic graph. To produce human-readable results, we additionally propose CBAG, a technique for conditional biomedical abstract generation

    Learning Ontology Relations by Combining Corpus-Based Techniques and Reasoning on Data from Semantic Web Sources

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    The manual construction of formal domain conceptualizations (ontologies) is labor-intensive. Ontology learning, by contrast, provides (semi-)automatic ontology generation from input data such as domain text. This thesis proposes a novel approach for learning labels of non-taxonomic ontology relations. It combines corpus-based techniques with reasoning on Semantic Web data. Corpus-based methods apply vector space similarity of verbs co-occurring with labeled and unlabeled relations to calculate relation label suggestions from a set of candidates. A meta ontology in combination with Semantic Web sources such as DBpedia and OpenCyc allows reasoning to improve the suggested labels. An extensive formal evaluation demonstrates the superior accuracy of the presented hybrid approach

    HiER 2015. Proceedings des 9. Hildesheimer Evaluierungs- und Retrievalworkshop

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    Die Digitalisierung formt unsere Informationsumwelten. Disruptive Technologien dringen verstärkt und immer schneller in unseren Alltag ein und verändern unser Informations- und Kommunikationsverhalten. Informationsmärkte wandeln sich. Der 9. Hildesheimer Evaluierungs- und Retrievalworkshop HIER 2015 thematisiert die Gestaltung und Evaluierung von Informationssystemen vor dem Hintergrund der sich beschleunigenden Digitalisierung. Im Fokus stehen die folgenden Themen: Digital Humanities, Internetsuche und Online Marketing, Information Seeking und nutzerzentrierte Entwicklung, E-Learning

    DARIAH and the Benelux

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    From Frequency to Meaning: Vector Space Models of Semantics

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    Computers understand very little of the meaning of human language. This profoundly limits our ability to give instructions to computers, the ability of computers to explain their actions to us, and the ability of computers to analyse and process text. Vector space models (VSMs) of semantics are beginning to address these limits. This paper surveys the use of VSMs for semantic processing of text. We organize the literature on VSMs according to the structure of the matrix in a VSM. There are currently three broad classes of VSMs, based on term-document, word-context, and pair-pattern matrices, yielding three classes of applications. We survey a broad range of applications in these three categories and we take a detailed look at a specific open source project in each category. Our goal in this survey is to show the breadth of applications of VSMs for semantics, to provide a new perspective on VSMs for those who are already familiar with the area, and to provide pointers into the literature for those who are less familiar with the field
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