Classification of Radiology Reports Using Neural Attention Models

The electronic health record (EHR) contains a large amount of multi-dimensional and unstructured clinical data of significant operational and research value. Distinguished from previous studies, our approach embraces a double-annotated dataset and strays away from obscure "black-box" models to comprehensive deep learning models. In this paper, we present a novel neural attention mechanism that not only classifies clinically important findings. Specifically, convolutional neural networks (CNN) with attention analysis are used to classify radiology head computed tomography reports based on five categories that radiologists would account for in assessing acute and communicable findings in daily practice. The experiments show that our CNN attention models outperform non-neural models, especially when trained on a larger dataset. Our attention analysis demonstrates the intuition behind the classifier's decision by generating a heatmap that highlights attended terms used by the CNN model; this is valuable when potential downstream medical decisions are to be performed by human experts or the classifier information is to be used in cohort construction such as for epidemiological studies

Automated Detection of Usage Errors in non-native English Writing

In an investigation of the use of a novelty detection algorithm for identifying inappropriate word combinations in a raw English corpus, we employ an unsupervised detection algorithm based on the one- class support vector machines (OC-SVMs) and extract sentences containing word sequences whose frequency of appearance is significantly low in native English writing. Combined with n-gram language models and document categorization techniques, the OC-SVM classifier assigns given sentences into two different groups; the sentences containing errors and those without errors. Accuracies are 79.30 % with bigram model, 86.63 % with trigram model, and 34.34 % with four-gram model

Analysis of classifiers' robustness to adversarial perturbations

The goal of this paper is to analyze an intriguing phenomenon recently discovered in deep networks, namely their instability to adversarial perturbations (Szegedy et. al., 2014). We provide a theoretical framework for analyzing the robustness of classifiers to adversarial perturbations, and show fundamental upper bounds on the robustness of classifiers. Specifically, we establish a general upper bound on the robustness of classifiers to adversarial perturbations, and then illustrate the obtained upper bound on the families of linear and quadratic classifiers. In both cases, our upper bound depends on a distinguishability measure that captures the notion of difficulty of the classification task. Our results for both classes imply that in tasks involving small distinguishability, no classifier in the considered set will be robust to adversarial perturbations, even if a good accuracy is achieved. Our theoretical framework moreover suggests that the phenomenon of adversarial instability is due to the low flexibility of classifiers, compared to the difficulty of the classification task (captured by the distinguishability). Moreover, we show the existence of a clear distinction between the robustness of a classifier to random noise and its robustness to adversarial perturbations. Specifically, the former is shown to be larger than the latter by a factor that is proportional to \sqrt{d} (with d being the signal dimension) for linear classifiers. This result gives a theoretical explanation for the discrepancy between the two robustness properties in high dimensional problems, which was empirically observed in the context of neural networks. To the best of our knowledge, our results provide the first theoretical work that addresses the phenomenon of adversarial instability recently observed for deep networks. Our analysis is complemented by experimental results on controlled and real-world data