Deep-reef fish communities of the Great Barrier Reef shelf-break: trophic structure and habitat associations

The ecology of habitats along the Great Barrier Reef (GBR) shelf-break has rarely been investigated. Thus, there is little understanding of how associated fishes interact with deeper environments. We examined relationships between deep-reef fish communities and benthic habitat structure. We sampled 48 sites over a large depth gradient (54–260 m) in the central GBR using Baited Remote Underwater Video Stations and multibeam sonar. Fish community composition differed both among multiple shelf-break reefs and habitats within reefs. Epibenthic cover decreased with depth. Deep epibenthic cover included sponges, corals, and macro-algae, with macro-algae present to 194 m. Structural complexity decreased with depth, with more calcified reef, boulders, and bedrock in shallower depths. Deeper sites were flatter and more homogeneous with softer substratum. Habitats were variable within depth strata and were reflected in different fish assemblages among sites and among locations. Overall, fish trophic groups changed with depth and included generalist and benthic carnivores, piscivores, and planktivores while herbivores were rare below 50 m. While depth influenced where trophic groups occurred, site orientation and habitat morphology determined the composition of trophic groups within depths. Future conservation strategies will need to consider the vulnerability of taxa with narrow distributions and habitat requirements in unique shelf-break environments

Habitat mapping effort at the Olympic Coast National Marine Sanctuary – Current status and future needs

With elevating interest to establish conservation efforts for groundfish stocks and continued scrutiny over the value of marine protected areas along the west coast, the importance of enhancing our knowledge of seabed characteristics through mapping activities is becoming increasingly more important, especially in a timely manner. Shortly after the inception of the Seabed Mapping Initiative instituted with the US Geological Survey (USGS), the National Marine Sanctuary Program (NMSP) assembled a panel of habitat mapping experts. They determined that the status of existing data sets and future data acquisition needs varied widely among the individual sanctuaries and that more detailed site assessments were needed to better prioritize mapping efforts and outline an overall joint strategy. To assist with that specific effort and provide pertinent information for the Olympic Coast National Marine Sanctuary’s (OCNMS) Management Plan Review, this report summarizes the mapping efforts that have taken place at the site to date; calculates a timeframe for completion of baseline mapping efforts when operating under current data acquisition limitations; describes an optimized survey strategy to dramatically reduce the required time to complete baseline surveying; and provides estimates for the needed vessel sea-days (DAS) to accomplish baseline survey completion within a 2, 5 and 10 year timeframe. (PDF contains 38 pages.

Mapping the Spatial-Temporal Variation in Ras Ghanada Seagrass Meadows and Sand Shoals between 1996, 2006 & 2012

Seagrass meadows offshore Ras Ghanada, as elsewhere, are an important component to the ecosystem providing numerous benefits to both aquatic and human life. This work focused on mapping the spatial and temporal distribution of seagrass meadows offshore Ras Ghanada using aerial photography acquired in 1996 and high-resolution satellite images captured in 2006 and 2012. The movements of sand shoals were also tracked, so as to further explain the dynamics of this ecosystem, as it is the area between the shoal crests that hosts the best developed seagrass meadows. The natural limiting factor for seagrass on the Ras Ghanada coastal shelf seems to be the fact that they cannot inhabit the (mobile) crests of the sand shoals, but rather, are restricted to the (more stable) sands of the shoal troughs. In the considered time period, both sand shoals and seagrass meadows migrated predominantly in a southeastern direction. The changes of seagrass that occurred in this study occurred on a fairly rapid timescale, in such that they were able to come back when there was disturbance as long as they had available habitat to move into. Furthermore, although seagrass cover declined by 3.4% from 1996 – 2012, there was a greater increase than decline in the areal coverage of seagrass post-Khalifa port construction in 2010. If sediments offshore Ras Ghanada can remain stable and the waters are not polluted by further construction, seagrasses should continue to thrive in the future

Geologic variability and Holocene sedimentary record on the Northern Gulf of Mexico inner to mid-continental shelf

Sidescan Sonar, chirp sonar sub-bottom profiles, and grab samples were collected on the north-central Gulf of Mexico continental shelf as part of an interdisciplinary study mapping juvenile red snapper habitat. Demarcation of essential fish habitat for juvenile red snapper (Lutjanus campechansis) in the Gulf of Mexico is considered critical for effective management of this valuable species. The first goal of this study was to map and describe the geology of this region. The second goal was to attempt to relate variations in geology to juvenile red snapper abundance and distribution. Sidescan mosaics were created for ten polygons, ranging in size from 2 to 20 km2 on the inner to middle shelf south of Mississippi-Alabama, in water depths of 17-40 m. Geological observations delineated three contrasting seabed types: (1) linear to patchy shell regions on the inner-middle shelf, (2) muddy sand sheets on the middle shelf, and (3) prodeltaic muds in the southwest of the study area, marking the eastern extent of recent shelf deposits from the modern Mississippi delta. The shell ridges stand 1-3 m above the surrounding seabed, and may extend 200 m across. They are composed of \u3e 50% CaCO3, including shell fragments from both estuarine and marine taxa, and contrast sharply with adjacent muddy sands containing minor shell. Radiocarbon dating of shell material, along with the geological characteristics of the ridges suggests that they are remnants of Holocene coastal environments. This region was previously described as either an extension of the MAFLA sand sheet or a transitional zone between the MAFLA sands and prodelta muds (Ludwick, 1964). In the present study, we identified a range of geological features of estuarine, shoreface, and wholly marine origin. The diversity of deposits described records a wide range of geological processes active from early-middle Holocene to recent time. The integration of geological observations with coordinated biological observations reveals that geologic structures and sediment composition on the northern Gulf of Mexico continental shelf are major controls on the distribution of juvenile red snapper (Patterson et al, in press), and record both coastal depositional histories and open-shelf processes active during Holocene transgression

Submerged carbonate banks aggregate pelagic megafauna in offshore tropical Australia

This research was undertaken for the Marine Biodiversity Hub, a collaborative partnership supported through funding from the Australian Government’s National Environmental Research Program (NERP). PB was the recipient of a scholarship for international fees during the course of this work. SN publishes with permission of the Chief Executive Officer, Geoscience Australia.The conservation of marine biodiversity is firmly embedded in national and international policy frameworks. However, the difficulties associated with conducting broad-scale surveys of oceanic environments restrict the evidence base available for applied management in pelagic waters. For example, the Oceanic Shoals Australian Marine Park (AMP) was established in 2012 in a part of Australia’s continental shelf where unique topographic features are thought to support significant levels of biodiversity, yet where our understanding of ecological processes remains limited. We deployed mid-water baited remote underwater video systems (mid-water BRUVS) in the Oceanic Shoals AMP to provide the first non-extractive baseline assessment of pelagic wildlife communities in the area. We used these observations and high-resolution multibeam swaths of the seafloor to explore potential relationships between prominent geomorphological features and the (i) composition, (ii) richness, and (iii) relative abundance of pelagic communities. We documented 32 vertebrate species across three sampling areas, ranging from small baitfish to large sharks and rays, and estimated that up to nearly twice as many taxa may occur within the region as a whole. This highlights the Oceanic Shoals AMP as a reservoir of biodiversity comparable to other documented offshore oceanic hotspots. Our results also confirm the AMP as a possible distant foraging destination for IUCN red listed sea turtles, and a potential breeding and/or nursing ground for a number of charismatic cetaceans. Model outputs indicate that both species richness and abundance increase in proximity to raised geomorphic structures such as submerged banks and pinnacles, highlighting the influence of submarine topography on megafauna distribution. By providing a foundational understanding of spatial patterns in pelagic wildlife communities throughout a little studied region, our work demonstrates how a combination of non-destructive sampling techniques and predictive models can provide new opportunities to support decision-making under data shortage.Publisher PDFPeer reviewe

Quantification of storm-induced bathymetric change in a back-barrier estuary

© The Author(s), 2016. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Estuaries and Coasts 40 (2017): 22-36, doi:10.1007/s12237-016-0138-5.Geomorphology is a fundamental control on ecological and economic function of estuaries. However, relative to open coasts, there has been little quantification of storm-induced bathymetric change in back-barrier estuaries. Vessel-based and airborne bathymetric mapping can cover large areas quickly, but change detection is difficult because measurement errors can be larger than the actual changes over the storm timescale. We quantified storm-induced bathymetric changes at several locations in Chincoteague Bay, Maryland/Virginia, over the August 2014 to July 2015 period using fixed, downward-looking altimeters and numerical modeling. At sand-dominated shoal sites, measurements showed storm-induced changes on the order of 5 cm, with variability related to stress magnitude and wind direction. Numerical modeling indicates that the predominantly northeasterly wind direction in the fall and winter promotes southwest-directed sediment transport, causing erosion of the northern face of sandy shoals; southwesterly winds in the spring and summer lead to the opposite trend. Our results suggest that storm-induced estuarine bathymetric change magnitudes are often smaller than those detectable with methods such as LiDAR. More precise fixed-sensor methods have the ability to elucidate the geomorphic processes responsible for modulating estuarine bathymetry on the event and seasonal timescale, but are limited spatially. Numerical modeling enables interpretation of broad-scale geomorphic processes and can be used to infer the long-term trajectory of estuarine bathymetric change due to episodic events, when informed by fixed-sensor methods

The value of remote sensing techniques in supporting effective extrapolation across multiple marine spatial scales

The reporting of ecological phenomena and environmental status routinely required point observations, collected with traditional sampling approaches to be extrapolated to larger reporting scales. This process encompasses difficulties that can quickly entrain significant errors. Remote sensing techniques offer insights and exceptional spatial coverage for observing the marine environment. This review provides guidance on (i) the structures and discontinuities inherent within the extrapolative process, (ii) how to extrapolate effectively across multiple spatial scales, and (iii) remote sensing techniques and data sets that can facilitate this process. This evaluation illustrates that remote sensing techniques are a critical component in extrapolation and likely to underpin the production of high-quality assessments of ecological phenomena and the regional reporting of environmental status. Ultimately, is it hoped that this guidance will aid the production of robust and consistent extrapolations that also make full use of the techniques and data sets that expedite this process

Commonwealth Marine Reserves Review: Report of the Expert Scientific Panel

The report provides a scientific basis for the declaration and management of the Australian Marine Reserve Syste