Contorsion: A Semantic XPath Processor

AbstractThis work describes the architecture of Contorsion, a semantic XPath processor that acts over an RDF mapping of XML. It contributes to a recent research trend that defines an XML-to-RDF mapping allowing XML documents interoperate at the semantic level. We use a model-mapping approach to represent instances of XML and XML Schema in RDF. This representation retains the node order, in contrast with the usual structure-mapping approach. The processor can be fed with an unlimited set of XML schemas and/or RDFS/OWL ontologies. The queries are resolved taking in consideration the structural and semantic connections descrived in the schemas and ontologies. Such behaviour, schema-awareness and semantic integration, can be useful for exploiting schema and ontology hierarchies in XPath queries

Semantic Invoice Processing

This work highlights how to transform information from invoice documents to semantic models, as an implementation of ontology modeling. The migration from printed paper to digital documents in the Mexican Government Offices in the last few years has brought significant opportunities for the usage of information technologies and applications. However, when changing digital document information into knowledge, there are still many gaps to be filled. This work proposes a solution to some issues regarding ontology modeling, specifically when mapping a document that follows some XML schema to an ontology under the OWL standard. The main contribution of this work is to provide new interpretations of the XML terms in the context of OWL, so that the XML Schema Definition (XSD) structures can be mapped into more complex OWL structures. A software tool developed to test and validate the information extraction strategies proposed is presented here.ITESO, A.C.Consejo Nacional de Ciencia y Tecnologí

Automated syntactic mediation for Web service integration

As the Web Services and Grid community adopt Semantic Web technology, we observe a shift towards higher-level workflow composition and service discovery practices. While this provides excellent functionality to non-expert users, more sophisticated middleware is required to hide the details of service invocation and service integration. An investigation of a common Bioinformatics use case reveals that the execution of high-level workflow designs requires additional processing to harmonise syntactically incompatible service interfaces. In this paper, we present an architecture to support the automatic reconciliation of data formats in such Web Service worklflows. The mediation of data is driven by ontologies that encapsulate the information contained in heterogeneous data structures supplying a common, conceptual data representation. Data conversion is carried out by a Configurable Mediator component, consuming mappings between \xml schemas and \owl ontologies. We describe our system and give examples of our mapping language against the background of a Bioinformatics use case

Semantic web technologies for video surveillance metadata

Video surveillance systems are growing in size and complexity. Such systems typically consist of integrated modules of different vendors to cope with the increasing demands on network and storage capacity, intelligent video analytics, picture quality, and enhanced visual interfaces. Within a surveillance system, relevant information (like technical details on the video sequences, or analysis results of the monitored environment) is described using metadata standards. However, different modules typically use different standards, resulting in metadata interoperability problems. In this paper, we introduce the application of Semantic Web Technologies to overcome such problems. We present a semantic, layered metadata model and integrate it within a video surveillance system. Besides dealing with the metadata interoperability problem, the advantages of using Semantic Web Technologies and the inherent rule support are shown. A practical use case scenario is presented to illustrate the benefits of our novel approach

The Semantic Automated Discovery and Integration (SADI) Web service Design-Pattern, API and Reference Implementation

Background. 
The complexity and inter-related nature of biological data poses a difficult challenge for data and tool integration. There has been a proliferation of interoperability standards and projects over the past decade, none of which has been widely adopted by the bioinformatics community. Recent attempts have focused on the use of semantics to assist integration, and Semantic Web technologies are being welcomed by this community.

Description. 
SADI – Semantic Automated Discovery and Integration – is a lightweight set of fully standards-compliant Semantic Web service design patterns that simplify the publication of services of the type commonly found in bioinformatics and other scientific domains. Using Semantic Web technologies at every level of the Web services “stack”, SADI services consume and produce instances of OWL Classes following a small number of very straightforward best-practices. In addition, we provide codebases that support these best-practices, and plug-in tools to popular developer and client software that dramatically simplify deployment of services by providers, and the discovery and utilization of those services by their consumers.

Conclusions.
SADI Services are fully compliant with, and utilize only foundational Web standards; are simple to create and maintain for service providers; and can be discovered and utilized in a very intuitive way by biologist end-users. In addition, the SADI design patterns significantly improve the ability of software to automatically discover appropriate services based on user-needs, and automatically chain these into complex analytical workflows. We show that, when resources are exposed through SADI, data compliant with a given ontological model can be automatically gathered, or generated, from these distributed, non-coordinating resources - a behavior we have not observed in any other Semantic system. Finally, we show that, using SADI, data dynamically generated from Web services can be explored in a manner very similar to data housed in static triple-stores, thus facilitating the intersection of Web services and Semantic Web technologies