Multi-object segmentation using coupled nonparametric shape and relative pose priors

We present a new method for multi-object segmentation in a maximum a posteriori estimation framework. Our method is motivated by the observation that neighboring or coupling objects in images generate configurations and co-dependencies which could potentially aid in segmentation if properly exploited. Our approach employs coupled shape and inter-shape pose priors that are computed using training images in a nonparametric multi-variate kernel density estimation framework. The coupled shape prior is obtained by estimating the joint shape distribution of multiple objects and the inter-shape pose priors are modeled via standard moments. Based on such statistical models, we formulate an optimization problem for segmentation, which we solve by an algorithm based on active contours. Our technique provides significant improvements in the segmentation of weakly contrasted objects in a number of applications. In particular for medical image analysis, we use our method to extract brain Basal Ganglia structures, which are members of a complex multi-object system posing a challenging segmentation problem. We also apply our technique to the problem of handwritten character segmentation. Finally, we use our method to segment cars in urban scenes

Histopathological image analysis : a review

Over the past decade, dramatic increases in computational power and improvement in image analysis algorithms have allowed the development of powerful computer-assisted analytical approaches to radiological data. With the recent advent of whole slide digital scanners, tissue histopathology slides can now be digitized and stored in digital image form. Consequently, digitized tissue histopathology has now become amenable to the application of computerized image analysis and machine learning techniques. Analogous to the role of computer-assisted diagnosis (CAD) algorithms in medical imaging to complement the opinion of a radiologist, CAD algorithms have begun to be developed for disease detection, diagnosis, and prognosis prediction to complement the opinion of the pathologist. In this paper, we review the recent state of the art CAD technology for digitized histopathology. This paper also briefly describes the development and application of novel image analysis technology for a few specific histopathology related problems being pursued in the United States and Europe

A New Computer-Aided Diagnosis System with Modified Genetic Feature Selection for BI-RADS Classification of Breast Masses in Mammograms

Mammography remains the most prevalent imaging tool for early breast cancer screening. The language used to describe abnormalities in mammographic reports is based on the breast Imaging Reporting and Data System (BI-RADS). Assigning a correct BI-RADS category to each examined mammogram is a strenuous and challenging task for even experts. This paper proposes a new and effective computer-aided diagnosis (CAD) system to classify mammographic masses into four assessment categories in BI-RADS. The mass regions are first enhanced by means of histogram equalization and then semiautomatically segmented based on the region growing technique. A total of 130 handcrafted BI-RADS features are then extrcated from the shape, margin, and density of each mass, together with the mass size and the patient's age, as mentioned in BI-RADS mammography. Then, a modified feature selection method based on the genetic algorithm (GA) is proposed to select the most clinically significant BI-RADS features. Finally, a back-propagation neural network (BPN) is employed for classification, and its accuracy is used as the fitness in GA. A set of 500 mammogram images from the digital database of screening mammography (DDSM) is used for evaluation. Our system achieves classification accuracy, positive predictive value, negative predictive value, and Matthews correlation coefficient of 84.5%, 84.4%, 94.8%, and 79.3%, respectively. To our best knowledge, this is the best current result for BI-RADS classification of breast masses in mammography, which makes the proposed system promising to support radiologists for deciding proper patient management based on the automatically assigned BI-RADS categories

Improvement of mammographic mass characterization using spiculation measures and morphological features

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/135119/1/mp1548.pd

Coupled non-parametric shape and moment-based inter-shape pose priors for multiple basal ganglia structure segmentation

This paper presents a new active contour-based, statistical method for simultaneous volumetric segmentation of multiple subcortical structures in the brain. In biological tissues, such as the human brain, neighboring structures exhibit co-dependencies which can aid in segmentation, if properly analyzed and modeled. Motivated by this observation, we formulate the segmentation problem as a maximum a posteriori estimation problem, in which we incorporate statistical prior models on the shapes and inter-shape (relative) poses of the structures of interest. This provides a principled mechanism to bring high level information about the shapes and the relationships of anatomical structures into the segmentation problem. For learning the prior densities we use a nonparametric multivariate kernel density estimation framework. We combine these priors with data in a variational framework and develop an active contour-based iterative segmentation algorithm. We test our method on the problem of volumetric segmentation of basal ganglia structures in magnetic resonance (MR) images. We present a set of 2D and 3D experiments as well as a quantitative performance analysis. In addition, we perform a comparison to several existent segmentation methods and demonstrate the improvements provided by our approach in terms of segmentation accuracy

A Fully Automatic Segmentation Method for Breast Ultrasound Images

Breast cancer is the second leading cause of death of women worldwide. Accurate lesion boundary detection is important for breast cancer diagnosis. Since many crucial features for discriminating benign and malignant lesions are based on the contour, shape, and texture of the lesion, an accurate segmentation method is essential for a successful diagnosis. Ultrasound is an effective screening tool and primarily useful for differentiating benign and malignant lesions. However, due to inherent speckle noise and low contrast of breast ultrasound imaging, automatic lesion segmentation is still a challenging task. This research focuses on developing a novel, effective, and fully automatic lesion segmentation method for breast ultrasound images. By incorporating empirical domain knowledge of breast structure, a region of interest is generated. Then, a novel enhancement algorithm (using a novel phase feature) and a newly developed neutrosophic clustering method are developed to detect the precise lesion boundary. Neutrosophy is a recently introduced branch of philosophy that deals with paradoxes, contradictions, antitheses, and antinomies. When neutrosophy is used to segment images with vague boundaries, its unique ability to deal with uncertainty is brought to bear. In this work, we apply neutrosophy to breast ultrasound image segmentation and propose a new clustering method named neutrosophic l-means. We compare the proposed method with traditional fuzzy c-means clustering and three other well-developed segmentation methods for breast ultrasound images, using the same database. Both accuracy and time complexity are analyzed. The proposed method achieves the best accuracy (TP rate is 94.36%, FP rate is 8.08%, and similarity rate is 87.39%) with a fairly rapid processing speed (about 20 seconds). Sensitivity analysis shows the robustness of the proposed method as well. Cases with multiple-lesions and severe shadowing effect (shadow areas having similar intensity values of the lesion and tightly connected with the lesion) are not included in this study

Semiautomatic contour detection of breast lesions in ultrasonic images with morphological operators and average radial derivative function

AbstractThis work presents a computerized lesion segmentation technique on breast ultrasound images. There were applied known techniques such as morphological filtering, Watershed transformation and average radial derivative function. To evaluate the performance of the proposed method, two protocols were established. For the first, the resulting segmentation contours were compared with those of 24 gold standard simulated ultrasound-like images, and, for second, with 36 breast US images manually delineated by two senior radiologists. Further, two evaluation parameters were used: the percentage of coincidence (CP) and the proportional distance (PD). The former indicates the similarity between contours, while the latter express the dissimilarity. The accuracy of the proposed method was evaluated by considering images with CP>80% and PD<10% as adequately delineated. It was higher than 80% for real images and higher than 88% for simulated images