Learning Aggregation Functions

Learning on sets is increasingly gaining attention in the machine learning community, due to its widespread applicability. Typically, representations over sets are computed by using fixed aggregation functions such as sum or maximum. However, recent results showed that universal function representation by sum- (or max-) decomposition requires either highly discontinuous (and thus poorly learnable) mappings, or a latent dimension equal to the maximum number of elements in the set. To mitigate this problem, we introduce a learnable aggregation function (LAF) for sets of arbitrary cardinality. LAF can approximate several extensively used aggregators (such as average, sum, maximum) as well as more complex functions (e.g., variance and skewness). We report experiments on semi-synthetic and real data showing that LAF outperforms state-of-the-art sum- (max-) decomposition architectures such as DeepSets and library-based architectures like Principal Neighborhood Aggregation, and can be effectively combined with attention-based architectures.Comment: Extended version (with proof appendix) of paper that is to appear in Proceedings of IJCAI 202

Analyzing Granger causality in climate data with time series classification methods

Attribution studies in climate science aim for scientifically ascertaining the influence of climatic variations on natural or anthropogenic factors. Many of those studies adopt the concept of Granger causality to infer statistical cause-effect relationships, while utilizing traditional autoregressive models. In this article, we investigate the potential of state-of-the-art time series classification techniques to enhance causal inference in climate science. We conduct a comparative experimental study of different types of algorithms on a large test suite that comprises a unique collection of datasets from the area of climate-vegetation dynamics. The results indicate that specialized time series classification methods are able to improve existing inference procedures. Substantial differences are observed among the methods that were tested

Label Attention Network for sequential multi-label classification: you were looking at a wrong self-attention

Most of the available user information can be represented as a sequence of timestamped events. Each event is assigned a set of categorical labels whose future structure is of great interest. For instance, our goal is to predict a group of items in the next customer's purchase or tomorrow's client transactions. This is a multi-label classification problem for sequential data. Modern approaches focus on transformer architecture for sequential data introducing self-attention for the elements in a sequence. In that case, we take into account events' time interactions but lose information on label inter-dependencies. Motivated by this shortcoming, we propose leveraging a self-attention mechanism over labels preceding the predicted step. As our approach is a Label-Attention NETwork, we call it LANET. Experimental evidence suggests that LANET outperforms the established models' performance and greatly captures interconnections between labels. For example, the micro-AUC of our approach is $0.9536$ compared to $0.7501$ for a vanilla transformer. We provide an implementation of LANET to facilitate its wider usage

AdaCC: Cumulative Cost-Sensitive Boosting for Imbalanced Classification

Class imbalance poses a major challenge for machine learning as most supervised learning models might exhibit bias towards the majority class and under-perform in the minority class. Cost-sensitive learning tackles this problem by treating the classes differently, formulated typically via a user-defined fixed misclassification cost matrix provided as input to the learner. Such parameter tuning is a challenging task that requires domain knowledge and moreover, wrong adjustments might lead to overall predictive performance deterioration. In this work, we propose a novel cost-sensitive boosting approach for imbalanced data that dynamically adjusts the misclassification costs over the boosting rounds in response to model's performance instead of using a fixed misclassification cost matrix. Our method, called AdaCC, is parameter-free as it relies on the cumulative behavior of the boosting model in order to adjust the misclassification costs for the next boosting round and comes with theoretical guarantees regarding the training error. Experiments on 27 real-world datasets from different domains with high class imbalance demonstrate the superiority of our method over 12 state-of-the-art cost-sensitive boosting approaches exhibiting consistent improvements in different measures, for instance, in the range of [0.3%-28.56%] for AUC, [3.4%-21.4%] for balanced accuracy, [4.8%-45%] for gmean and [7.4%-85.5%] for recall.Comment: 30 page

DIVA: A Dirichlet Process Based Incremental Deep Clustering Algorithm via Variational Auto-Encoder

Generative model-based deep clustering frameworks excel in classifying complex data, but are limited in handling dynamic and complex features because they require prior knowledge of the number of clusters. In this paper, we propose a nonparametric deep clustering framework that employs an infinite mixture of Gaussians as a prior. Our framework utilizes a memoized online variational inference method that enables the "birth" and "merge" moves of clusters, allowing our framework to cluster data in a "dynamic-adaptive" manner, without requiring prior knowledge of the number of features. We name the framework as DIVA, a Dirichlet Process-based Incremental deep clustering framework via Variational Auto-Encoder. Our framework, which outperforms state-of-the-art baselines, exhibits superior performance in classifying complex data with dynamically changing features, particularly in the case of incremental features. We released our source code implementation at: https://github.com/Ghiara/divaComment: update supplementary material

MAtch, eXpand and Improve: Unsupervised Finetuning for Zero-Shot Action Recognition with Language Knowledge

Large scale Vision-Language (VL) models have shown tremendous success in aligning representations between visual and text modalities. This enables remarkable progress in zero-shot recognition, image generation & editing, and many other exciting tasks. However, VL models tend to over-represent objects while paying much less attention to verbs, and require additional tuning on video data for best zero-shot action recognition performance. While previous work relied on large-scale, fully-annotated data, in this work we propose an unsupervised approach. We adapt a VL model for zero-shot and few-shot action recognition using a collection of unlabeled videos and an unpaired action dictionary. Based on that, we leverage Large Language Models and VL models to build a text bag for each unlabeled video via matching, text expansion and captioning. We use those bags in a Multiple Instance Learning setup to adapt an image-text backbone to video data. Although finetuned on unlabeled video data, our resulting models demonstrate high transferability to numerous unseen zero-shot downstream tasks, improving the base VL model performance by up to 14\%, and even comparing favorably to fully-supervised baselines in both zero-shot and few-shot video recognition transfer. The code will be released later at \url{https://github.com/wlin-at/MAXI}.Comment: Accepted at ICCV 202

Temporal graph mining and distributed processing

With the recent growth of social media platforms and the human desire to interact with the digital world a lot of human-human and human-device interaction data is getting generated every second. With the boom of the Internet of Things (IoT) devices, a lot of device-device interactions are also now on the rise. All these interactions are nothing but a representation of how the underlying network is connecting different entities over time. These interactions when modeled as an interaction network presents a lot of unique opportunities to uncover interesting patterns and to understand the dynamics of the network. Understanding the dynamics of the network is very important because it encapsulates the way we communicate, socialize, consume information and get influenced. To this end, in this PhD thesis, we focus on analyzing an interaction network to understand how the underlying network is being used. We define interaction network as a sequence of time-stamped interactions E over edges of a static graph G=(V, E). Interaction networks can be used to model many real-world networks for example, in a social network or a communication network, each interaction over an edge represents an interaction between two users, e.g., emailing, making a call, re-tweeting, or in case of the financial network an interaction between two accounts to represent a transaction. We analyze interaction network under two settings. In the first setting, we study interaction network under a sliding window model. We assume a node could pass information to other nodes if they are connected to them using edges present in a time window. In this model, we study how the importance or centrality of a node evolves over time. In the second setting, we put additional constraints on how information flows between nodes. We assume a node could pass information to other nodes only if there is a temporal path between them. To restrict the length of the temporal paths we consider a time window in this approach as well. We apply this model to solve the time-constrained influence maximization problem. By analyzing the interaction network data under our model we find the top-k most influential nodes. We test our model both on human-human interaction using social network data as well as on location-location interaction using location-based social network(LBSNs) data. In the same setting, we also mine temporal cyclic paths to understand the communication patterns in a network. Temporal cycles have many applications and appear naturally in communication networks where one person posts a message and after a while reacts to a thread of reactions from peers on the post. In financial networks, on the other hand, the presence of a temporal cycle could be indicative of certain types of fraud. We provide efficient algorithms for all our analysis and test their efficiency and effectiveness on real-world data. Finally, given that many of the algorithms we study have huge computational demands, we also studied distributed graph processing algorithms. An important aspect of distributed graph processing is to correctly partition the graph data between different machine. A lot of research has been done on efficient graph partitioning strategies but there is no one good partitioning strategy for all kind of graphs and algorithms. Choosing the best partitioning strategy is nontrivial and is mostly a trial and error exercise. To address this problem we provide a cost model based approach to give a better understanding of how a given partitioning strategy is performing for a given graph and algorithm.Con el reciente crecimiento de las redes sociales y el deseo humano de interactuar con el mundo digital, una gran cantidad de datos de interacción humano-a-humano o humano-a-dispositivo se generan cada segundo. Con el auge de los dispositivos IoT, las interacciones dispositivo-a-dispositivo también están en alza. Todas estas interacciones no son más que una representación de como la red subyacente conecta distintas entidades en el tiempo. Modelar estas interacciones en forma de red de interacciones presenta una gran cantidad de oportunidades únicas para descubrir patrones interesantes y entender la dinamicidad de la red. Entender la dinamicidad de la red es clave ya que encapsula la forma en la que nos comunicamos, socializamos, consumimos información y somos influenciados. Para ello, en esta tesis doctoral, nos centramos en analizar una red de interacciones para entender como la red subyacente es usada. Definimos una red de interacciones como una sequencia de interacciones grabadas en el tiempo E sobre aristas de un grafo estático G=(V, E). Las redes de interacción se pueden usar para modelar gran cantidad de aplicaciones reales, por ejemplo en una red social o de comunicaciones cada interacción sobre una arista representa una interacción entre dos usuarios (correo electrónico, llamada, retweet), o en el caso de una red financiera una interacción entre dos cuentas para representar una transacción. Analizamos las redes de interacción bajo múltiples escenarios. En el primero, estudiamos las redes de interacción bajo un modelo de ventana deslizante. Asumimos que un nodo puede mandar información a otros nodos si estan conectados utilizando aristas presentes en una ventana temporal. En este modelo, estudiamos como la importancia o centralidad de un nodo evoluciona en el tiempo. En el segundo escenario añadimos restricciones adicionales respecto como la información fluye entre nodos. Asumimos que un nodo puede mandar información a otros nodos solo si existe un camino temporal entre ellos. Para restringir la longitud de los caminos temporales también asumimos una ventana temporal. Aplicamos este modelo para resolver este problema de maximización de influencia restringido temporalmente. Analizando los datos de la red de interacción bajo nuestro modelo intentamos descubrir los k nodos más influyentes. Examinamos nuestro modelo en interacciones humano-a-humano, usando datos de redes sociales, como en ubicación-a-ubicación usando datos de redes sociales basades en localización (LBSNs). En el mismo escenario también minamos camínos cíclicos temporales para entender los patrones de comunicación en una red. Existen múltiples aplicaciones para cíclos temporales y aparecen naturalmente en redes de comunicación donde una persona envía un mensaje y después de un tiempo reacciona a una cadena de reacciones de compañeros en el mensaje. En redes financieras, por otro lado, la presencia de un ciclo temporal puede indicar ciertos tipos de fraude. Proponemos algoritmos eficientes para todos nuestros análisis y evaluamos su eficiencia y efectividad en datos reales. Finalmente, dado que muchos de los algoritmos estudiados tienen una gran demanda computacional, también estudiamos los algoritmos de procesado distribuido de grafos. Un aspecto importante de procesado distribuido de grafos es el de correctamente particionar los datos del grafo entre distintas máquinas. Gran cantidad de investigación se ha realizado en estrategias para particionar eficientemente un grafo, pero no existe un particionamento bueno para todos los tipos de grafos y algoritmos. Escoger la mejor estrategia de partición no es trivial y es mayoritariamente un ejercicio de prueba y error. Con tal de abordar este problema, proporcionamos un modelo de costes para dar un mejor entendimiento en como una estrategia de particionamiento actúa dado un grafo y un algoritmo

Temporal graph mining and distributed processing

Cotutela Universitat Politècnica de Catalunya i Université Libre de BruxellesWith the recent growth of social media platforms and the human desire to interact with the digital world a lot of human-human and human-device interaction data is getting generated every second. With the boom of the Internet of Things (IoT) devices, a lot of device-device interactions are also now on the rise. All these interactions are nothing but a representation of how the underlying network is connecting different entities over time. These interactions when modeled as an interaction network presents a lot of unique opportunities to uncover interesting patterns and to understand the dynamics of the network. Understanding the dynamics of the network is very important because it encapsulates the way we communicate, socialize, consume information and get influenced. To this end, in this PhD thesis, we focus on analyzing an interaction network to understand how the underlying network is being used. We define interaction network as a sequence of time-stamped interactions E over edges of a static graph G=(V, E). Interaction networks can be used to model many real-world networks for example, in a social network or a communication network, each interaction over an edge represents an interaction between two users, e.g., emailing, making a call, re-tweeting, or in case of the financial network an interaction between two accounts to represent a transaction. We analyze interaction network under two settings. In the first setting, we study interaction network under a sliding window model. We assume a node could pass information to other nodes if they are connected to them using edges present in a time window. In this model, we study how the importance or centrality of a node evolves over time. In the second setting, we put additional constraints on how information flows between nodes. We assume a node could pass information to other nodes only if there is a temporal path between them. To restrict the length of the temporal paths we consider a time window in this approach as well. We apply this model to solve the time-constrained influence maximization problem. By analyzing the interaction network data under our model we find the top-k most influential nodes. We test our model both on human-human interaction using social network data as well as on location-location interaction using location-based social network(LBSNs) data. In the same setting, we also mine temporal cyclic paths to understand the communication patterns in a network. Temporal cycles have many applications and appear naturally in communication networks where one person posts a message and after a while reacts to a thread of reactions from peers on the post. In financial networks, on the other hand, the presence of a temporal cycle could be indicative of certain types of fraud. We provide efficient algorithms for all our analysis and test their efficiency and effectiveness on real-world data. Finally, given that many of the algorithms we study have huge computational demands, we also studied distributed graph processing algorithms. An important aspect of distributed graph processing is to correctly partition the graph data between different machine. A lot of research has been done on efficient graph partitioning strategies but there is no one good partitioning strategy for all kind of graphs and algorithms. Choosing the best partitioning strategy is nontrivial and is mostly a trial and error exercise. To address this problem we provide a cost model based approach to give a better understanding of how a given partitioning strategy is performing for a given graph and algorithm.Con el reciente crecimiento de las redes sociales y el deseo humano de interactuar con el mundo digital, una gran cantidad de datos de interacción humano-a-humano o humano-a-dispositivo se generan cada segundo. Con el auge de los dispositivos IoT, las interacciones dispositivo-a-dispositivo también están en alza. Todas estas interacciones no son más que una representación de como la red subyacente conecta distintas entidades en el tiempo. Modelar estas interacciones en forma de red de interacciones presenta una gran cantidad de oportunidades únicas para descubrir patrones interesantes y entender la dinamicidad de la red. Entender la dinamicidad de la red es clave ya que encapsula la forma en la que nos comunicamos, socializamos, consumimos información y somos influenciados. Para ello, en esta tesis doctoral, nos centramos en analizar una red de interacciones para entender como la red subyacente es usada. Definimos una red de interacciones como una sequencia de interacciones grabadas en el tiempo E sobre aristas de un grafo estático G=(V, E). Las redes de interacción se pueden usar para modelar gran cantidad de aplicaciones reales, por ejemplo en una red social o de comunicaciones cada interacción sobre una arista representa una interacción entre dos usuarios (correo electrónico, llamada, retweet), o en el caso de una red financiera una interacción entre dos cuentas para representar una transacción. Analizamos las redes de interacción bajo múltiples escenarios. En el primero, estudiamos las redes de interacción bajo un modelo de ventana deslizante. Asumimos que un nodo puede mandar información a otros nodos si estan conectados utilizando aristas presentes en una ventana temporal. En este modelo, estudiamos como la importancia o centralidad de un nodo evoluciona en el tiempo. En el segundo escenario añadimos restricciones adicionales respecto como la información fluye entre nodos. Asumimos que un nodo puede mandar información a otros nodos solo si existe un camino temporal entre ellos. Para restringir la longitud de los caminos temporales también asumimos una ventana temporal. Aplicamos este modelo para resolver este problema de maximización de influencia restringido temporalmente. Analizando los datos de la red de interacción bajo nuestro modelo intentamos descubrir los k nodos más influyentes. Examinamos nuestro modelo en interacciones humano-a-humano, usando datos de redes sociales, como en ubicación-a-ubicación usando datos de redes sociales basades en localización (LBSNs). En el mismo escenario también minamos camínos cíclicos temporales para entender los patrones de comunicación en una red. Existen múltiples aplicaciones para cíclos temporales y aparecen naturalmente en redes de comunicación donde una persona envía un mensaje y después de un tiempo reacciona a una cadena de reacciones de compañeros en el mensaje. En redes financieras, por otro lado, la presencia de un ciclo temporal puede indicar ciertos tipos de fraude. Proponemos algoritmos eficientes para todos nuestros análisis y evaluamos su eficiencia y efectividad en datos reales. Finalmente, dado que muchos de los algoritmos estudiados tienen una gran demanda computacional, también estudiamos los algoritmos de procesado distribuido de grafos. Un aspecto importante de procesado distribuido de grafos es el de correctamente particionar los datos del grafo entre distintas máquinas. Gran cantidad de investigación se ha realizado en estrategias para particionar eficientemente un grafo, pero no existe un particionamento bueno para todos los tipos de grafos y algoritmos. Escoger la mejor estrategia de partición no es trivial y es mayoritariamente un ejercicio de prueba y error. Con tal de abordar este problema, proporcionamos un modelo de costes para dar un mejor entendimiento en como una estrategia de particionamiento actúa dado un grafo y un algoritmo.Postprint (published version

Políticas de Copyright de Publicações Científicas em Repositórios Institucionais: O Caso do INESC TEC

A progressiva transformação das práticas científicas, impulsionada pelo desenvolvimento das novas Tecnologias de Informação e Comunicação (TIC), têm possibilitado aumentar o acesso à informação, caminhando gradualmente para uma abertura do ciclo de pesquisa. Isto permitirá resolver a longo prazo uma adversidade que se tem colocado aos investigadores, que passa pela existência de barreiras que limitam as condições de acesso, sejam estas geográficas ou financeiras. Apesar da produção científica ser dominada, maioritariamente, por grandes editoras comerciais, estando sujeita às regras por estas impostas, o Movimento do Acesso Aberto cuja primeira declaração pública, a Declaração de Budapeste (BOAI), é de 2002, vem propor alterações significativas que beneficiam os autores e os leitores. Este Movimento vem a ganhar importância em Portugal desde 2003, com a constituição do primeiro repositório institucional a nível nacional. Os repositórios institucionais surgiram como uma ferramenta de divulgação da produção científica de uma instituição, com o intuito de permitir abrir aos resultados da investigação, quer antes da publicação e do próprio processo de arbitragem (preprint), quer depois (postprint), e, consequentemente, aumentar a visibilidade do trabalho desenvolvido por um investigador e a respetiva instituição. O estudo apresentado, que passou por uma análise das políticas de copyright das publicações científicas mais relevantes do INESC TEC, permitiu não só perceber que as editoras adotam cada vez mais políticas que possibilitam o auto-arquivo das publicações em repositórios institucionais, como também que existe todo um trabalho de sensibilização a percorrer, não só para os investigadores, como para a instituição e toda a sociedade. A produção de um conjunto de recomendações, que passam pela implementação de uma política institucional que incentive o auto-arquivo das publicações desenvolvidas no âmbito institucional no repositório, serve como mote para uma maior valorização da produção científica do INESC TEC.The progressive transformation of scientific practices, driven by the development of new Information and Communication Technologies (ICT), which made it possible to increase access to information, gradually moving towards an opening of the research cycle. This opening makes it possible to resolve, in the long term, the adversity that has been placed on researchers, which involves the existence of barriers that limit access conditions, whether geographical or financial. Although large commercial publishers predominantly dominate scientific production and subject it to the rules imposed by them, the Open Access movement whose first public declaration, the Budapest Declaration (BOAI), was in 2002, proposes significant changes that benefit the authors and the readers. This Movement has gained importance in Portugal since 2003, with the constitution of the first institutional repository at the national level. Institutional repositories have emerged as a tool for disseminating the scientific production of an institution to open the results of the research, both before publication and the preprint process and postprint, increase the visibility of work done by an investigator and his or her institution. The present study, which underwent an analysis of the copyright policies of INESC TEC most relevant scientific publications, allowed not only to realize that publishers are increasingly adopting policies that make it possible to self-archive publications in institutional repositories, all the work of raising awareness, not only for researchers but also for the institution and the whole society. The production of a set of recommendations, which go through the implementation of an institutional policy that encourages the self-archiving of the publications developed in the institutional scope in the repository, serves as a motto for a greater appreciation of the scientific production of INESC TEC