Five Tales of Random Forest Regression

We present a set of variations on the theme of Random Forest regression: two applications to the problem of estimating galactic distances based on photometry which produce results comparable to or better than all other current approaches to the problem, an extension of the methodology to produce error distribution variance estimates for individual regression estimates which property appears unique among non-parametric regression estimators, an exponential asymptotic improvement in algorithmic training speed over the current de facto standard implementation which improvement was derived from a theoretical model of the training process combined with competent software engineering, a massively parallel implementation of the regression algorithm for a GPGPU cluster integrated with a distributed database management system resulting in a fast roundtrip ingest-analyze-archive procedure on a system with total power consumption under 1kW, and a novel theoretical comparison of the methodology with that of kernel regression relating the Random Forest bootstrap sample size to the kernel regression bandwidth parameter, resulting in a novel extension of the Random Forest methodology which offers lower mean-squared error than the standard methodology

An Experimental Evaluation of Datacenter Workloads On Low-Power Embedded Micro Servers

This paper presents a comprehensive evaluation of an ultra-low power cluster, built upon the Intel Edison based micro servers. The improved performance and high energy efficiency of micro servers have driven both academia and industry to explore the possibility of replacing conventional brawny servers with a larger swarm of embedded micro servers. Existing attempts mostly focus on mobile-class micro servers, whose capacities are similar to mobile phones. We, on the other hand, target on sensor-class micro servers, which are originally intended for uses in wearable technologies, sensor networks, and Internet-of-Things. Although sensor-class micro servers have much less capacity, they are touted for minimal power consumption (< 1 Watt), which opens new possibilities of achieving higher energy efficiency in datacenter workloads. Our systematic evaluation of the Edison cluster and comparisons to conventional brawny clusters involve careful workload choosing and laborious parameter tuning, which ensures maximum server utilization and thus fair comparisons. Results show that the Edison cluster achieves up to 3.5× improvement on work-done-per-joule for web service applications and data-intensive MapReduce jobs. In terms of scalability, the Edison cluster scales linearly on the throughput of web service workloads, and also shows satisfactory scalability for MapReduce workloads despite coordination overhead.This research was supported in part by NSF grant 13-20209.Ope

Portable parallel stochastic optimization for the design of aeropropulsion components

This report presents the results of Phase 1 research to develop a methodology for performing large-scale Multi-disciplinary Stochastic Optimization (MSO) for the design of aerospace systems ranging from aeropropulsion components to complete aircraft configurations. The current research recognizes that such design optimization problems are computationally expensive, and require the use of either massively parallel or multiple-processor computers. The methodology also recognizes that many operational and performance parameters are uncertain, and that uncertainty must be considered explicitly to achieve optimum performance and cost. The objective of this Phase 1 research was to initialize the development of an MSO methodology that is portable to a wide variety of hardware platforms, while achieving efficient, large-scale parallelism when multiple processors are available. The first effort in the project was a literature review of available computer hardware, as well as review of portable, parallel programming environments. The first effort was to implement the MSO methodology for a problem using the portable parallel programming language, Parallel Virtual Machine (PVM). The third and final effort was to demonstrate the example on a variety of computers, including a distributed-memory multiprocessor, a distributed-memory network of workstations, and a single-processor workstation. Results indicate the MSO methodology can be well-applied towards large-scale aerospace design problems. Nearly perfect linear speedup was demonstrated for computation of optimization sensitivity coefficients on both a 128-node distributed-memory multiprocessor (the Intel iPSC/860) and a network of workstations (speedups of almost 19 times achieved for 20 workstations). Very high parallel efficiencies (75 percent for 31 processors and 60 percent for 50 processors) were also achieved for computation of aerodynamic influence coefficients on the Intel. Finally, the multi-level parallelization strategy that will be needed for large-scale MSO problems was demonstrated to be highly efficient. The same parallel code instructions were used on both platforms, demonstrating portability. There are many applications for which MSO can be applied, including NASA's High-Speed-Civil Transport, and advanced propulsion systems. The use of MSO will reduce design and development time and testing costs dramatically

Probabilistic structural mechanics research for parallel processing computers

Aerospace structures and spacecraft are a complex assemblage of structural components that are subjected to a variety of complex, cyclic, and transient loading conditions. Significant modeling uncertainties are present in these structures, in addition to the inherent randomness of material properties and loads. To properly account for these uncertainties in evaluating and assessing the reliability of these components and structures, probabilistic structural mechanics (PSM) procedures must be used. Much research has focused on basic theory development and the development of approximate analytic solution methods in random vibrations and structural reliability. Practical application of PSM methods was hampered by their computationally intense nature. Solution of PSM problems requires repeated analyses of structures that are often large, and exhibit nonlinear and/or dynamic response behavior. These methods are all inherently parallel and ideally suited to implementation on parallel processing computers. New hardware architectures and innovative control software and solution methodologies are needed to make solution of large scale PSM problems practical

Architecting Efficient Data Centers.

Data center power consumption has become a key constraint in continuing to scale Internet services. As our society’s reliance on “the Cloud” continues to grow, companies require an ever-increasing amount of computational capacity to support their customers. Massive warehouse-scale data centers have emerged, requiring 30MW or more of total power capacity. Over the lifetime of a typical high-scale data center, power-related costs make up 50% of the total cost of ownership (TCO). Furthermore, the aggregate effect of data center power consumption across the country cannot be ignored. In total, data center energy usage has reached approximately 2% of aggregate consumption in the United States and continues to grow. This thesis addresses the need to increase computational efficiency to address this grow- ing problem. It proposes a new classes of power management techniques: coordinated full-system idle low-power modes to increase the energy proportionality of modern servers. First, we introduce the PowerNap server architecture, a coordinated full-system idle low- power mode which transitions in and out of an ultra-low power nap state to save power during brief idle periods. While effective for uniprocessor systems, PowerNap relies on full-system idleness and we show that such idleness disappears as the number of cores per processor continues to increase. We expose this problem in a case study of Google Web search in which we demonstrate that coordinated full-system active power modes are necessary to reach energy proportionality and that PowerNap is ineffective because of a lack of idleness. To recover full-system idleness, we introduce DreamWeaver, architectural support for deep sleep. DreamWeaver allows a server to exchange latency for full-system idleness, allowing PowerNap-enabled servers to be effective and provides a better latency- power savings tradeoff than existing approaches. Finally, this thesis investigates workloads which achieve efficiency through methodical cluster provisioning techniques. Using the popular memcached workload, this thesis provides examples of provisioning clusters for cost-efficiency given latency, throughput, and data set size targets.Ph.D.Computer Science & EngineeringUniversity of Michigan, Horace H. Rackham School of Graduate Studieshttp://deepblue.lib.umich.edu/bitstream/2027.42/91499/1/meisner_1.pd

A Study of Scalability and Cost-effectiveness of Large-scale Scientific Applications over Heterogeneous Computing Environment

Recent advances in large-scale experimental facilities ushered in an era of data-driven science. These large-scale data increase the opportunity to answer many fundamental questions in basic science. However, these data pose new challenges to the scientific community in terms of their optimal processing and transfer. Consequently, scientists are in dire need of robust high performance computing (HPC) solutions that can scale with terabytes of data. In this thesis, I address the challenges in three major aspects of scientific big data processing as follows: 1) Developing scalable software and algorithms for data- and compute-intensive scientific applications. 2) Proposing new cluster architectures that these software tools need for good performance. 3) Transferring the big scientific dataset among clusters situated at geographically disparate locations. In the first part, I develop scalable algorithms to process huge amounts of scientific big data using the power of recent analytic tools such as, Hadoop, Giraph, NoSQL, etc. At a broader level, these algorithms take the advantage of locality-based computing that can scale with increasing amount of data. The thesis mainly addresses the challenges involved in large-scale genome analysis applications such as, genomic error correction and genome assembly which made their way to the forefront of big data challenges recently. In the second part of the thesis, I perform a systematic benchmark study using the above-mentioned algorithms on different distributed cyberinfrastructures to pinpoint the limitations in a traditional HPC cluster to process big data. Then I propose the solution to those limitations by balancing the I/O bandwidth of the solid state drive (SSD) with the computational speed of high-performance CPUs. A theoretical model has been also proposed to help the HPC system designers who are striving for system balance. In the third part of the thesis, I develop a high throughput architecture for transferring these big scientific datasets among geographically disparate clusters. The architecture leverages the power of Ethereum\u27s Blockchain technology and Swarm\u27s peer-to-peer (P2P) storage technology to transfer the data in secure, tamper-proof fashion. Instead of optimizing the computation in a single cluster, in this part, my major motivation is to foster translational research and data interoperability in collaboration with multiple institutions