An algebraic model for rational SO(3)-spectra

Greenlees established an equivalence of categories between the homotopy category of rational SO(3)-spectra and the derived category DA(SO(3)) of a certain abelian category. In this paper we lift this equivalence of homotopy categories to the level of Quillen equivalences of model categories. Methods used in this paper provide the first step towards obtaining an algebraic model for the toral part of rational G-spectra, for any compact Lie group G

A generalisation of the deformation variety

Given an ideal triangulation of a connected 3-manifold with non-empty boundary consisting of a disjoint union of tori, a point of the deformation variety is an assignment of complex numbers to the dihedral angles of the tetrahedra subject to Thurston's gluing equations. From this, one can recover a representation of the fundamental group of the manifold into the isometries of 3-dimensional hyperbolic space. However, the deformation variety depends crucially on the triangulation: there may be entire components of the representation variety which can be obtained from the deformation variety with one triangulation but not another. We introduce a generalisation of the deformation variety, which again consists of assignments of complex variables to certain dihedral angles subject to polynomial equations, but together with some extra combinatorial data concerning degenerate tetrahedra. This "extended deformation variety" deals with many situations that the deformation variety cannot. In particular we show that for any ideal triangulation of a small orientable 3-manifold with a single torus boundary component, we can recover all of the irreducible non-dihedral representations from the associated extended deformation variety. More generally, we give an algorithm to produce a triangulation of a given orientable 3-manifold with torus boundary components for which the same result holds. As an application, we show that this extended deformation variety detects all factors of the PSL(2,C) A-polynomial associated to the components consisting of the representations it recovers.Comment: 47 pages, 26 figures. Rewrote introduction and added motivation section based on referee's comments. Rewrote the section on retriangulation, and added new result on small manifolds with a single cus

On the quasi-isometric rigidity of graphs of surface groups

Let $\Gamma$ be a word hyperbolic group with a cyclic JSJ decomposition that has only rigid vertex groups, which are all fundamental groups of closed surface groups. We show that any group $H$ quasi-isometric to $\Gamma$ is abstractly commensurable with $\Gamma$.Comment: 54 pages, 10 figures, comments welcom

Group-theoretic models of the inversion process in bacterial genomes

The variation in genome arrangements among bacterial taxa is largely due to the process of inversion. Recent studies indicate that not all inversions are equally probable, suggesting, for instance, that shorter inversions are more frequent than longer, and those that move the terminus of replication are less probable than those that do not. Current methods for establishing the inversion distance between two bacterial genomes are unable to incorporate such information. In this paper we suggest a group-theoretic framework that in principle can take these constraints into account. In particular, we show that by lifting the problem from circular permutations to the affine symmetric group, the inversion distance can be found in polynomial time for a model in which inversions are restricted to acting on two regions. This requires the proof of new results in group theory, and suggests a vein of new combinatorial problems concerning permutation groups on which group theorists will be needed to collaborate with biologists. We apply the new method to inferring distances and phylogenies for published Yersinia pestis data.Comment: 19 pages, 7 figures, in Press, Journal of Mathematical Biolog

Symmetric hyperbolic monopoles

Hyperbolic monopole solutions can be obtained from circle-invariant ADHM data if the curvature of hyperbolic space is suitably tuned. Here we give explicit ADHM data corresponding to axial hyperbolic monopoles in a simple, tractable form, as well as expressions for the axial monopole fields. The data is deformed into new 1-parameter families preserving dihedral and twisted-line symmetries. In many cases explicit expressions are presented for their spectral curves and rational maps of both Donaldson and Jarvis type.Comment: 20 pages, 1 figur

Hyperbolic Dehn filling in dimension four

We introduce and study some deformations of complete finite-volume hyperbolic four-manifolds that may be interpreted as four-dimensional analogues of Thurston's hyperbolic Dehn filling. We construct in particular an analytic path of complete, finite-volume cone four-manifolds $M_t$ that interpolates between two hyperbolic four-manifolds $M_0$ and $M_1$ with the same volume $\frac {8}3\pi^2$. The deformation looks like the familiar hyperbolic Dehn filling paths that occur in dimension three, where the cone angle of a core simple closed geodesic varies monotonically from $0$ to $2\pi$. Here, the singularity of $M_t$ is an immersed geodesic surface whose cone angles also vary monotonically from $0$ to $2\pi$. When a cone angle tends to $0$ a small core surface (a torus or Klein bottle) is drilled producing a new cusp. We show that various instances of hyperbolic Dehn fillings may arise, including one case where a degeneration occurs when the cone angles tend to $2\pi$, like in the famous figure-eight knot complement example. The construction makes an essential use of a family of four-dimensional deforming hyperbolic polytopes recently discovered by Kerckhoff and Storm.Comment: 60 pages, 23 figures. Final versio