A Bulk-Parallel Priority Queue in External Memory with STXXL

We propose the design and an implementation of a bulk-parallel external memory priority queue to take advantage of both shared-memory parallelism and high external memory transfer speeds to parallel disks. To achieve higher performance by decoupling item insertions and extractions, we offer two parallelization interfaces: one using "bulk" sequences, the other by defining "limit" items. In the design, we discuss how to parallelize insertions using multiple heaps, and how to calculate a dynamic prediction sequence to prefetch blocks and apply parallel multiway merge for extraction. Our experimental results show that in the selected benchmarks the priority queue reaches 75% of the full parallel I/O bandwidth of rotational disks and and 65% of SSDs, or the speed of sorting in external memory when bounded by computation.Comment: extended version of SEA'15 conference pape

Engineering Parallel String Sorting

We discuss how string sorting algorithms can be parallelized on modern multi-core shared memory machines. As a synthesis of the best sequential string sorting algorithms and successful parallel sorting algorithms for atomic objects, we first propose string sample sort. The algorithm makes effective use of the memory hierarchy, uses additional word level parallelism, and largely avoids branch mispredictions. Then we focus on NUMA architectures, and develop parallel multiway LCP-merge and -mergesort to reduce the number of random memory accesses to remote nodes. Additionally, we parallelize variants of multikey quicksort and radix sort that are also useful in certain situations. Comprehensive experiments on five current multi-core platforms are then reported and discussed. The experiments show that our implementations scale very well on real-world inputs and modern machines.Comment: 46 pages, extension of "Parallel String Sample Sort" arXiv:1305.115

The Ubiquitous B-tree: Volume II

Major developments relating to the B-tree from early 1979 through the fall of 1986 are presented. This updates the well-known article, The Ubiquitous B-Tree by Douglas Comer (Computing Surveys, June 1979). After a basic overview of B and B+ trees, recent research is cited as well as descriptions of nine B-tree variants developed since Comer\u27s article. The advantages and disadvantages of each variant over the basic B-tree are emphasized. Also included are a discussion of concurrency control issues in B-trees and a speculation on the future of B-trees

Power models, energy models and libraries for energy-efficient concurrent data structures and algorithms

EXCESS deliverable D2.3. More information at http://www.excess-project.eu/This deliverable reports the results of the power models, energy models and librariesfor energy-efficient concurrent data structures and algorithms as available by projectmonth 30 of Work Package 2 (WP2). It reports i) the latest results of Task 2.2-2.4 onproviding programming abstractions and libraries for developing energy-efficient datastructures and algorithms and ii) the improved results of Task 2.1 on investigating andmodeling the trade-off between energy and performance of concurrent data structuresand algorithms. The work has been conducted on two main EXCESS platforms: Intelplatforms with recent Intel multicore CPUs and Movidius Myriad platforms

Algorithm Libraries for Multi-Core Processors

By providing parallelized versions of established algorithm libraries, we ease the exploitation of the multiple cores on modern processors for the programmer. The Multi-Core STL provides basic algorithms for internal memory, while the parallelized STXXL enables multi-core acceleration for algorithms on large data sets stored on disk. Some parallelized geometric algorithms are introduced into CGAL. Further, we design and implement sorting algorithms for huge data in distributed external memory

Parallel String Sample Sort

We discuss how string sorting algorithms can be parallelized on modern multi-core shared memory machines. As a synthesis of the best sequential string sorting algorithms and successful parallel sorting algorithms for atomic objects, we propose string sample sort. The algorithm makes effective use of the memory hierarchy, uses additional word level parallelism, and largely avoids branch mispredictions. Additionally, we parallelize variants of multikey quicksort and radix sort that are also useful in certain situations.Comment: 34 pages, 7 figures and 12 table

Lock-free Concurrent Data Structures

Concurrent data structures are the data sharing side of parallel programming. Data structures give the means to the program to store data, but also provide operations to the program to access and manipulate these data. These operations are implemented through algorithms that have to be efficient. In the sequential setting, data structures are crucially important for the performance of the respective computation. In the parallel programming setting, their importance becomes more crucial because of the increased use of data and resource sharing for utilizing parallelism. The first and main goal of this chapter is to provide a sufficient background and intuition to help the interested reader to navigate in the complex research area of lock-free data structures. The second goal is to offer the programmer familiarity to the subject that will allow her to use truly concurrent methods.Comment: To appear in "Programming Multi-core and Many-core Computing Systems", eds. S. Pllana and F. Xhafa, Wiley Series on Parallel and Distributed Computin