1,112 research outputs found
Unstructured mesh algorithms for aerodynamic calculations
The use of unstructured mesh techniques for solving complex aerodynamic flows is discussed. The principle advantages of unstructured mesh strategies, as they relate to complex geometries, adaptive meshing capabilities, and parallel processing are emphasized. The various aspects required for the efficient and accurate solution of aerodynamic flows are addressed. These include mesh generation, mesh adaptivity, solution algorithms, convergence acceleration, and turbulence modeling. Computations of viscous turbulent two-dimensional flows and inviscid three-dimensional flows about complex configurations are demonstrated. Remaining obstacles and directions for future research are also outlined
Constructing Intrinsic Delaunay Triangulations of Submanifolds
We describe an algorithm to construct an intrinsic Delaunay triangulation of
a smooth closed submanifold of Euclidean space. Using results established in a
companion paper on the stability of Delaunay triangulations on -generic
point sets, we establish sampling criteria which ensure that the intrinsic
Delaunay complex coincides with the restricted Delaunay complex and also with
the recently introduced tangential Delaunay complex. The algorithm generates a
point set that meets the required criteria while the tangential complex is
being constructed. In this way the computation of geodesic distances is
avoided, the runtime is only linearly dependent on the ambient dimension, and
the Delaunay complexes are guaranteed to be triangulations of the manifold
A fast and robust patient specific Finite Element mesh registration technique: application to 60 clinical cases
Finite Element mesh generation remains an important issue for patient
specific biomechanical modeling. While some techniques make automatic mesh
generation possible, in most cases, manual mesh generation is preferred for
better control over the sub-domain representation, element type, layout and
refinement that it provides. Yet, this option is time consuming and not suited
for intraoperative situations where model generation and computation time is
critical. To overcome this problem we propose a fast and automatic mesh
generation technique based on the elastic registration of a generic mesh to the
specific target organ in conjunction with element regularity and quality
correction. This Mesh-Match-and-Repair (MMRep) approach combines control over
the mesh structure along with fast and robust meshing capabilities, even in
situations where only partial organ geometry is available. The technique was
successfully tested on a database of 5 pre-operatively acquired complete femora
CT scans, 5 femoral heads partially digitized at intraoperative stage, and 50
CT volumes of patients' heads. The MMRep algorithm succeeded in all 60 cases,
yielding for each patient a hex-dominant, Atlas based, Finite Element mesh with
submillimetric surface representation accuracy, directly exploitable within a
commercial FE software
Workshop on the Integration of Finite Element Modeling with Geometric Modeling
The workshop on the Integration of Finite Element Modeling with Geometric Modeling was held on 12 May 1987. It was held to discuss the geometric modeling requirements of the finite element modeling process and to better understand the technical aspects of the integration of these two areas. The 11 papers are presented except for one for which only the abstract is given
3D mesh processing using GAMer 2 to enable reaction-diffusion simulations in realistic cellular geometries
Recent advances in electron microscopy have enabled the imaging of single
cells in 3D at nanometer length scale resolutions. An uncharted frontier for in
silico biology is the ability to simulate cellular processes using these
observed geometries. Enabling such simulations requires watertight meshing of
electron micrograph images into 3D volume meshes, which can then form the basis
of computer simulations of such processes using numerical techniques such as
the Finite Element Method. In this paper, we describe the use of our recently
rewritten mesh processing software, GAMer 2, to bridge the gap between poorly
conditioned meshes generated from segmented micrographs and boundary marked
tetrahedral meshes which are compatible with simulation. We demonstrate the
application of a workflow using GAMer 2 to a series of electron micrographs of
neuronal dendrite morphology explored at three different length scales and show
that the resulting meshes are suitable for finite element simulations. This
work is an important step towards making physical simulations of biological
processes in realistic geometries routine. Innovations in algorithms to
reconstruct and simulate cellular length scale phenomena based on emerging
structural data will enable realistic physical models and advance discovery at
the interface of geometry and cellular processes. We posit that a new frontier
at the intersection of computational technologies and single cell biology is
now open.Comment: 39 pages, 14 figures. High resolution figures and supplemental movies
available upon reques
TESS: A Relativistic Hydrodynamics Code on a Moving Voronoi Mesh
We have generalized a method for the numerical solution of hyperbolic systems
of equations using a dynamic Voronoi tessellation of the computational domain.
The Voronoi tessellation is used to generate moving computational meshes for
the solution of multi-dimensional systems of conservation laws in finite-volume
form. The mesh generating points are free to move with arbitrary velocity, with
the choice of zero velocity resulting in an Eulerian formulation. Moving the
points at the local fluid velocity makes the formulation effectively
Lagrangian. We have written the TESS code to solve the equations of
compressible hydrodynamics and magnetohydrodynamics for both relativistic and
non-relativistic fluids on a dynamic Voronoi mesh. When run in Lagrangian mode,
TESS is significantly less diffusive than fixed mesh codes and thus preserves
contact discontinuities to high precision while also accurately capturing
strong shock waves. TESS is written for Cartesian, spherical and cylindrical
coordinates and is modular so that auxilliary physics solvers are readily
integrated into the TESS framework and so that the TESS framework can be
readily adapted to solve general systems of equations. We present results from
a series of test problems to demonstrate the performance of TESS and to
highlight some of the advantages of the dynamic tessellation method for solving
challenging problems in astrophysical fluid dynamics.Comment: ApJS, 197, 1
Grid generation for the solution of partial differential equations
A general survey of grid generators is presented with a concern for understanding why grids are necessary, how they are applied, and how they are generated. After an examination of the need for meshes, the overall applications setting is established with a categorization of the various connectivity patterns. This is split between structured grids and unstructured meshes. Altogether, the categorization establishes the foundation upon which grid generation techniques are developed. The two primary categories are algebraic techniques and partial differential equation techniques. These are each split into basic parts, and accordingly are individually examined in some detail. In the process, the interrelations between the various parts are accented. From the established background in the primary techniques, consideration is shifted to the topic of interactive grid generation and then to adaptive meshes. The setting for adaptivity is established with a suitable means to monitor severe solution behavior. Adaptive grids are considered first and are followed by adaptive triangular meshes. Then the consideration shifts to the temporal coupling between grid generators and PDE-solvers. To conclude, a reflection upon the discussion, herein, is given
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