Model based fault diagnosis for hybrid systems : application on chemical processes

The complexity and the size of the industrial chemical processes induce the monitoring of a growing number of process variables. Their knowledge is generally based on the measurements of system variables and on the physico-chemical models of the process. Nevertheless, this information is imprecise because of process and measurement noise. So the research ways aim at developing new and more powerful techniques for the detection of process fault. In this work, we present a method for the fault detection based on the comparison between the real system and the reference model evolution generated by the extended Kalman filter. The reference model is simulated by the dynamic hybrid simulator, PrODHyS. It is a general object-oriented environment which provides common and reusable components designed for the development and the management of dynamic simulation of industrial systems. The use of this method is illustrated through a didactic example relating to the field of Chemical Process System Engineering

A review of applications of fuzzy sets to safety and reliability engineering

Safety and reliability are rigorously assessed during the design of dependable systems. Probabilistic risk assessment (PRA) processes are comprehensive, structured and logical methods widely used for this purpose. PRA approaches include, but not limited to Fault Tree Analysis (FTA), Failure Mode and Effects Analysis (FMEA), and Event Tree Analysis (ETA). In conventional PRA, failure data about components is required for the purposes of quantitative analysis. In practice, it is not always possible to fully obtain this data due to unavailability of primary observations and consequent scarcity of statistical data about the failure of components. To handle such situations, fuzzy set theory has been successfully used in novel PRA approaches for safety and reliability evaluation under conditions of uncertainty. This paper presents a review of fuzzy set theory based methodologies applied to safety and reliability engineering, which include fuzzy FTA, fuzzy FMEA, fuzzy ETA, fuzzy Bayesian networks, fuzzy Markov chains, and fuzzy Petri nets. Firstly, we describe relevant fundamentals of fuzzy set theory and then we review applications of fuzzy set theory to system safety and reliability analysis. The review shows the context in which each technique may be more appropriate and highlights the overall potential usefulness of fuzzy set theory in addressing uncertainty in safety and reliability engineering

Comparison of Metabolic Pathways by Considering Potential Fluxes

Comparison of metabolic pathways is useful in phylogenetic analysis and for understanding metabolic functions when studying diseases and in drugs engineering. In the literature many techniques have been proposed to compare metabolic pathways, but most of them focus on structural aspects, while behavioural or functional aspects are generally not considered. In this paper we propose a new method for comparing metabolic pathways of different organisms based on a similarity measure which considers both homology of reactions and functional aspects of the pathways. The latter are captured by relying on a Petri net representation of the pathways and comparing the corresponding T-invariant bases, which represent potential fluxes in the nets. The approach is implemented in a prototype tool, CoMeta, which allows us to test and validate our proposal. Some experiments with CoMeta are presented

Compositional dependability analysis of dynamic systems with uncertainty

Over the past two decades, research has focused on simplifying dependability analysis by looking at how we can synthesise dependability information from system models automatically. This has led to the field of model-based safety assessment (MBSA), which has attracted a significant amount of interest from industry, academia, and government agencies. Different model-based safety analysis methods, such as Hierarchically Performed Hazard Origin & Propagation Studies (HiP-HOPS), are increasingly applied by industry for dependability analysis of safety-critical systems. Such systems may feature multiple modes of operation where the behaviour of the systems and the interactions between system components can change according to what modes of operation the systems are in.MBSA techniques usually combine different classical safety analysis approaches to allow the analysts to perform safety analyses automatically or semi-automatically. For example, HiP-HOPS is a state-of-the-art MBSA approach which enhances an architectural model of a system with logical failure annotations to allow safety studies such as Fault Tree Analysis (FTA) and Failure Modes and Effects Analysis (FMEA). In this way it shows how the failure of a single component or combinations of failures of different components can lead to system failure. As systems are getting more complex and their behaviour becomes more dynamic, capturing this dynamic behaviour and the many possible interactions between the components is necessary to develop an accurate failure model.One of the ways of modelling this dynamic behaviour is with a state-transition diagram. Introducing a dynamic model compatible with the existing architectural information of systems can provide significant benefits in terms of accurate representation and expressiveness when analysing the dynamic behaviour of modern large-scale and complex safety-critical systems. Thus the first key contribution of this thesis is a methodology to enable MBSA techniques to model dynamic behaviour of systems. This thesis demonstrates the use of this methodology using the HiP-HOPS tool as an example, and thus extends HiP-HOPS with state-transition annotations. This extension allows HiP-HOPS to model more complex dynamic scenarios and perform compositional dynamic dependability analysis of complex systems by generating Pandora temporal fault trees (TFTs). As TFTs capture state, the techniques used for solving classical FTs are not suitable to solve them. They require a state space solution for quantification of probability. This thesis therefore proposes two methodologies based on Petri Nets and Bayesian Networks to provide state space solutions to Pandora TFTs.Uncertainty is another important (yet incomplete) area of MBSA: typical MBSA approaches are not capable of performing quantitative analysis under uncertainty. Therefore, in addition to the above contributions, this thesis proposes a fuzzy set theory based methodology to quantify Pandora temporal fault trees with uncertainty in failure data of components.The proposed methodologies are applied to a case study to demonstrate how they can be used in practice. Finally, the overall contributions of the thesis are evaluated by discussing the results produced and from these conclusions about the potential benefits of the new techniques are drawn

Computational aspects of cellular intelligence and their role in artificial intelligence.

The work presented in this thesis is concerned with an exploration of the computational aspects of the primitive intelligence associated with single-celled organisms. The main aim is to explore this Cellular Intelligence and its role within Artificial Intelligence. The findings of an extensive literature search into the biological characteristics, properties and mechanisms associated with Cellular Intelligence, its underlying machinery - Cell Signalling Networks and the existing computational methods used to capture it are reported. The results of this search are then used to fashion the development of a versatile new connectionist representation, termed the Artificial Reaction Network (ARN). The ARN belongs to the branch of Artificial Life known as Artificial Chemistry and has properties in common with both Artificial Intelligence and Systems Biology techniques, including: Artificial Neural Networks, Artificial Biochemical Networks, Gene Regulatory Networks, Random Boolean Networks, Petri Nets, and S-Systems. The thesis outlines the following original work: The ARN is used to model the chemotaxis pathway of Escherichia coli and is shown to capture emergent characteristics associated with this organism and Cellular Intelligence more generally. The computational properties of the ARN and its applications in robotic control are explored by combining functional motifs found in biochemical network to create temporal changing waveforms which control the gaits of limbed robots. This system is then extended into a complete control system by combining pattern recognition with limb control in a single ARN. The results show that the ARN can offer increased flexibility over existing methods. Multiple distributed cell-like ARN based agents termed Cytobots are created. These are first used to simulate aggregating cells based on the slime mould Dictyostelium discoideum. The Cytobots are shown to capture emergent behaviour arising from multiple stigmergic interactions. Applications of Cytobots within swarm robotics are investigated by applying them to benchmark search problems and to the task of cleaning up a simulated oil spill. The results are compared to those of established optimization algorithms using similar cell inspired strategies, and to other robotic agent strategies. Consideration is given to the advantages and disadvantages of the technique and suggestions are made for future work in the area. The report concludes that the Artificial Reaction Network is a versatile and powerful technique which has application in both simulation of chemical systems, and in robotic control, where it can offer a higher degree of flexibility and computational efficiency than benchmark alternatives. Furthermore, it provides a tool which may possibly throw further light on the origins and limitations of the primitive intelligence associated with cells

Foundations of Multi-Paradigm Modelling for Cyber-Physical Systems

This open access book coherently gathers well-founded information on the fundamentals of and formalisms for modelling cyber-physical systems (CPS). Highlighting the cross-disciplinary nature of CPS modelling, it also serves as a bridge for anyone entering CPS from related areas of computer science or engineering. Truly complex, engineered systems—known as cyber-physical systems—that integrate physical, software, and network aspects are now on the rise. However, there is no unifying theory nor systematic design methods, techniques or tools for these systems. Individual (mechanical, electrical, network or software) engineering disciplines only offer partial solutions. A technique known as Multi-Paradigm Modelling has recently emerged suggesting to model every part and aspect of a system explicitly, at the most appropriate level(s) of abstraction, using the most appropriate modelling formalism(s), and then weaving the results together to form a representation of the system. If properly applied, it enables, among other global aspects, performance analysis, exhaustive simulation, and verification. This book is the first systematic attempt to bring together these formalisms for anyone starting in the field of CPS who seeks solid modelling foundations and a comprehensive introduction to the distinct existing techniques that are multi-paradigmatic. Though chiefly intended for master and post-graduate level students in computer science and engineering, it can also be used as a reference text for practitioners

From Epidemic to Pandemic Modelling

We present a methodology for systematically extending epidemic models to multilevel and multiscale spatio-temporal pandemic ones. Our approach builds on the use of coloured stochastic and continuous Petri nets facilitating the sound component-based extension of basic SIR models to include population stratification and also spatio-geographic information and travel connections, represented as graphs, resulting in robust stratified pandemic metapopulation models. This method is inherently easy to use, producing scalable and reusable models with a high degree of clarity and accessibility which can be read either in a deterministic or stochastic paradigm. Our method is supported by a publicly available platform PetriNuts; it enables the visual construction and editing of models; deterministic, stochastic and hybrid simulation as well as structural and behavioural analysis. All the models are available as supplementary material, ensuring reproducibility.Comment: 79 pages (with Appendix), 23 figures, 7 table