Fruit Detection and Tree Segmentation for Yield Mapping in Orchards

Accurate information gathering and processing is critical for precision horticulture, as growers aim to optimise their farm management practices. An accurate inventory of the crop that details its spatial distribution along with health and maturity, can help farmers efficiently target processes such as chemical and fertiliser spraying, crop thinning, harvest management, labour planning and marketing. Growers have traditionally obtained this information by using manual sampling techniques, which tend to be labour intensive, spatially sparse, expensive, inaccurate and prone to subjective biases. Recent advances in sensing and automation for field robotics allow for key measurements to be made for individual plants throughout an orchard in a timely and accurate manner. Farmer operated machines or unmanned robotic platforms can be equipped with a range of sensors to capture a detailed representation over large areas. Robust and accurate data processing techniques are therefore required to extract high level information needed by the grower to support precision farming. This thesis focuses on yield mapping in orchards using image and light detection and ranging (LiDAR) data captured using an unmanned ground vehicle (UGV). The contribution is the framework and algorithmic components for orchard mapping and yield estimation that is applicable to different fruit types and orchard configurations. The framework includes detection of fruits in individual images and tracking them over subsequent frames. The fruit counts are then associated to individual trees, which are segmented from image and LiDAR data, resulting in a structured spatial representation of yield. The first contribution of this thesis is the development of a generic and robust fruit detection algorithm. Images captured in the outdoor environment are susceptible to highly variable external factors that lead to significant appearance variations. Specifically in orchards, variability is caused by changes in illumination, target pose, tree types, etc. The proposed techniques address these issues by using state-of-the-art feature learning approaches for image classification, while investigating the utility of orchard domain knowledge for fruit detection. Detection is performed using both pixel-wise classification of images followed instance segmentation, and bounding-box regression approaches. The experimental results illustrate the versatility of complex deep learning approaches over a multitude of fruit types. The second contribution of this thesis is a tree segmentation approach to detect the individual trees that serve as a standard unit for structured orchard information systems. The work focuses on trellised trees, which present unique challenges for segmentation algorithms due to their intertwined nature. LiDAR data are used to segment the trellis face, and to generate proposals for individual trees trunks. Additional trunk proposals are provided using pixel-wise classification of the image data. The multi-modal observations are fine-tuned by modelling trunk locations using a hidden semi-Markov model (HSMM), within which prior knowledge of tree spacing is incorporated. The final component of this thesis addresses the visual occlusion of fruit within geometrically complex canopies by using a multi-view detection and tracking approach. Single image fruit detections are tracked over a sequence of images, and associated to individual trees or farm rows, with the spatial distribution of the fruit counting forming a yield map over the farm. The results show the advantage of using multi-view imagery (instead of single view analysis) for fruit counting and yield mapping. This thesis includes extensive experimentation in almond, apple and mango orchards, with data captured by a UGV spanning a total of 5 hectares of farm area, over 30 km of vehicle traversal and more than 7,000 trees. The validation of the different processes is performed using manual annotations, which includes fruit and tree locations in image and LiDAR data respectively. Additional evaluation of yield mapping is performed by comparison against fruit counts on trees at the farm and counts made by the growers post-harvest. The framework developed in this thesis is demonstrated to be accurate compared to ground truth at all scales of the pipeline, including fruit detection and tree mapping, leading to accurate yield estimation, per tree and per row, for the different crops. Through the multitude of field experiments conducted over multiple seasons and years, the thesis presents key practical insights necessary for commercial development of an information gathering system in orchards

The Use of Agricultural Robots in Orchard Management

Book chapter that summarizes recent research on agricultural robotics in orchard management, including Robotic pruning, Robotic thinning, Robotic spraying, Robotic harvesting, Robotic fruit transportation, and future trends.Comment: 22 page

Row-sensing Templates: A Generic 3D Sensor-based Approach to Robot Localization with Respect to Orchard Row Centerlines

Accurate robot localization relative to orchard row centerlines is essential for autonomous guidance where satellite signals are often obstructed by foliage. Existing sensor-based approaches rely on various features extracted from images and point clouds. However, any selected features are not available consistently, because the visual and geometrical characteristics of orchard rows change drastically when tree types, growth stages, canopy management practices, seasons, and weather conditions change. In this work, we introduce a novel localization method that doesn't rely on features; instead, it relies on the concept of a row-sensing template, which is the expected observation of a 3D sensor traveling in an orchard row, when the sensor is anywhere on the centerline and perfectly aligned with it. First, the template is built using a few measurements, provided that the sensor's true pose with respect to the centerline is available. Then, during navigation, the best pose estimate (and its confidence) is estimated by maximizing the match between the template and the sensed point cloud using particle-filtering. The method can adapt to various orchards and conditions by re-building the template. Experiments were performed in a vineyard, and in an orchard in different seasons. Results showed that the lateral mean absolute error (MAE) was less than 3.6% of the row width, and the heading MAE was less than 1.72 degrees. Localization was robust, as errors didn't increase when less than 75% of measurement points were missing. The results indicate that template-based localization can provide a generic approach for accurate and robust localization in real-world orchards

Automatic 3D Mapping for Tree Diameter Measurements in Inventory Operations

Forestry is a major industry in many parts of the world. It relies on forest inventory, which consists of measuring tree attributes. We propose to use 3D mapping, based on the iterative closest point algorithm, to automatically measure tree diameters in forests from mobile robot observations. While previous studies showed the potential for such technology, they lacked a rigorous analysis of diameter estimation methods in challenging forest environments. Here, we validated multiple diameter estimation methods, including two novel ones, in a new varied dataset of four different forest sites, 11 trajectories, totaling 1458 tree observations and 1.4 hectares. We provide recommendations for the deployment of mobile robots in a forestry context. We conclude that our mapping method is usable in the context of automated forest inventory, with our best method yielding a root mean square error of 3.45 cm for our whole dataset, and 2.04 cm in ideal conditions consisting of mature forest with well spaced trees

Multi-modal deep learning for Fuji apple detection using RGB-D cameras and their radiometric capabilities

Fruit detection and localization will be essential for future agronomic management of fruit crops, with applications in yield prediction, yield mapping and automated harvesting. RGB-D cameras are promising sensors for fruit detection given that they provide geometrical information with color data. Some of these sensors work on the principle of time-of-flight (ToF) and, besides color and depth, provide the backscatter signal intensity. However, this radiometric capability has not been exploited for fruit detection applications. This work presents the KFuji RGB-DS database, composed of 967 multi-modal images containing a total of 12,839 Fuji apples. Compilation of the database allowed a study of the usefulness of fusing RGB-D and radiometric information obtained with Kinect v2 for fruit detection. To do so, the signal intensity was range corrected to overcome signal attenuation, obtaining an image that was proportional to the reflectance of the scene. A registration between RGB, depth and intensity images was then carried out. The Faster R-CNN model was adapted for use with five-channel input images: color (RGB), depth (D) and range-corrected intensity signal (S). Results show an improvement of 4.46% in F1-score when adding depth and range-corrected intensity channels, obtaining an F1-score of 0.898 and an AP of 94.8% when all channels are used. From our experimental results, it can be concluded that the radiometric capabilities of ToF sensors give valuable information for fruit detection.This work was partly funded by the Secretaria d’Universitats i Recerca del Departament d’Empresa i Coneixement de la Generalitat de Catalunya, the Spanish Ministry of Economy and Competitiveness and the European Regional Development Fund (ERDF) under Grants 2017SGR 646, AGL2013-48297-C2-2-R and MALEGRA, TEC2016-75976-R. The Spanish Ministry of Education is thanked for Mr. J. Gené’s predoctoral fellowships (FPU15/03355). We would also like to thank Nufri and Vicens Maquinària Agrícola S.A. for their support during data acquisition, and Adria Carbó for his assistance in Faster R-CNN implementation