Binarized support vector machines

The widely used Support Vector Machine (SVM) method has shown to yield very good results in Supervised Classification problems. Other methods such as Classification Trees have become more popular among practitioners than SVM thanks to their interpretability, which is an important issue in Data Mining. In this work, we propose an SVM-based method that automatically detects the most important predictor variables, and the role they play in the classifier. In particular, the proposed method is able to detect those values and intervals which are critical for the classification. The method involves the optimization of a Linear Programming problem, with a large number of decision variables. The numerical experience reported shows that a rather direct use of the standard Column-Generation strategy leads to a classification method which, in terms of classification ability, is competitive against the standard linear SVM and Classification Trees. Moreover, the proposed method is robust, i.e., it is stable in the presence of outliers and invariant to change of scale or measurement units of the predictor variables. When the complexity of the classifier is an important issue, a wrapper feature selection method is applied, yielding simpler, still competitive, classifiers

Physical Representation-based Predicate Optimization for a Visual Analytics Database

Querying the content of images, video, and other non-textual data sources requires expensive content extraction methods. Modern extraction techniques are based on deep convolutional neural networks (CNNs) and can classify objects within images with astounding accuracy. Unfortunately, these methods are slow: processing a single image can take about 10 milliseconds on modern GPU-based hardware. As massive video libraries become ubiquitous, running a content-based query over millions of video frames is prohibitive. One promising approach to reduce the runtime cost of queries of visual content is to use a hierarchical model, such as a cascade, where simple cases are handled by an inexpensive classifier. Prior work has sought to design cascades that optimize the computational cost of inference by, for example, using smaller CNNs. However, we observe that there are critical factors besides the inference time that dramatically impact the overall query time. Notably, by treating the physical representation of the input image as part of our query optimization---that is, by including image transforms, such as resolution scaling or color-depth reduction, within the cascade---we can optimize data handling costs and enable drastically more efficient classifier cascades. In this paper, we propose Tahoma, which generates and evaluates many potential classifier cascades that jointly optimize the CNN architecture and input data representation. Our experiments on a subset of ImageNet show that Tahoma's input transformations speed up cascades by up to 35 times. We also find up to a 98x speedup over the ResNet50 classifier with no loss in accuracy, and a 280x speedup if some accuracy is sacrificed.Comment: Camera-ready version of the paper submitted to ICDE 2019, In Proceedings of the 35th IEEE International Conference on Data Engineering (ICDE 2019

Multi-class protein fold classification using a new ensemble machine learning approach.

Protein structure classification represents an important process in understanding the associations between sequence and structure as well as possible functional and evolutionary relationships. Recent structural genomics initiatives and other high-throughput experiments have populated the biological databases at a rapid pace. The amount of structural data has made traditional methods such as manual inspection of the protein structure become impossible. Machine learning has been widely applied to bioinformatics and has gained a lot of success in this research area. This work proposes a novel ensemble machine learning method that improves the coverage of the classifiers under the multi-class imbalanced sample sets by integrating knowledge induced from different base classifiers, and we illustrate this idea in classifying multi-class SCOP protein fold data. We have compared our approach with PART and show that our method improves the sensitivity of the classifier in protein fold classification. Furthermore, we have extended this method to learning over multiple data types, preserving the independence of their corresponding data sources, and show that our new approach performs at least as well as the traditional technique over a single joined data source. These experimental results are encouraging, and can be applied to other bioinformatics problems similarly characterised by multi-class imbalanced data sets held in multiple data sources