Matching aggregate posteriors in the variational autoencoder

The variational autoencoder (VAE) is a well-studied, deep, latent-variable model (DLVM) that efficiently optimizes the variational lower bound of the log marginal data likelihood and has a strong theoretical foundation. However, the VAE's known failure to match the aggregate posterior often results in \emph{pockets/holes} in the latent distribution (i.e., a failure to match the prior) and/or \emph{posterior collapse}, which is associated with a loss of information in the latent space. This paper addresses these shortcomings in VAEs by reformulating the objective function associated with VAEs in order to match the aggregate/marginal posterior distribution to the prior. We use kernel density estimate (KDE) to model the aggregate posterior in high dimensions. The proposed method is named the \emph{aggregate variational autoencoder} (AVAE) and is built on the theoretical framework of the VAE. Empirical evaluation of the proposed method on multiple benchmark data sets demonstrates the effectiveness of the AVAE relative to state-of-the-art (SOTA) methods

Variational Autoencoders with Riemannian Brownian Motion Priors

Variational Autoencoders (VAEs) represent the given data in a low-dimensional latent space, which is generally assumed to be Euclidean. This assumption naturally leads to the common choice of a standard Gaussian prior over continuous latent variables. Recent work has, however, shown that this prior has a detrimental effect on model capacity, leading to subpar performance. We propose that the Euclidean assumption lies at the heart of this failure mode. To counter this, we assume a Riemannian structure over the latent space, which constitutes a more principled geometric view of the latent codes, and replace the standard Gaussian prior with a Riemannian Brownian motion prior. We propose an efficient inference scheme that does not rely on the unknown normalizing factor of this prior. Finally, we demonstrate that this prior significantly increases model capacity using only one additional scalar parameter.Comment: Published in ICML 202

Amortized Bayesian Inference of GISAXS Data with Normalizing Flows

Grazing-Incidence Small-Angle X-ray Scattering (GISAXS) is a modern imaging technique used in material research to study nanoscale materials. Reconstruction of the parameters of an imaged object imposes an ill-posed inverse problem that is further complicated when only an in-plane GISAXS signal is available. Traditionally used inference algorithms such as Approximate Bayesian Computation (ABC) rely on computationally expensive scattering simulation software, rendering analysis highly time-consuming. We propose a simulation-based framework that combines variational auto-encoders and normalizing flows to estimate the posterior distribution of object parameters given its GISAXS data. We apply the inference pipeline to experimental data and demonstrate that our method reduces the inference cost by orders of magnitude while producing consistent results with ABC