Deep Lesion Graphs in the Wild: Relationship Learning and Organization of Significant Radiology Image Findings in a Diverse Large-scale Lesion Database

Radiologists in their daily work routinely find and annotate significant abnormalities on a large number of radiology images. Such abnormalities, or lesions, have collected over years and stored in hospitals' picture archiving and communication systems. However, they are basically unsorted and lack semantic annotations like type and location. In this paper, we aim to organize and explore them by learning a deep feature representation for each lesion. A large-scale and comprehensive dataset, DeepLesion, is introduced for this task. DeepLesion contains bounding boxes and size measurements of over 32K lesions. To model their similarity relationship, we leverage multiple supervision information including types, self-supervised location coordinates and sizes. They require little manual annotation effort but describe useful attributes of the lesions. Then, a triplet network is utilized to learn lesion embeddings with a sequential sampling strategy to depict their hierarchical similarity structure. Experiments show promising qualitative and quantitative results on lesion retrieval, clustering, and classification. The learned embeddings can be further employed to build a lesion graph for various clinically useful applications. We propose algorithms for intra-patient lesion matching and missing annotation mining. Experimental results validate their effectiveness.Comment: Accepted by CVPR2018. DeepLesion url adde

Deformable Part-based Fully Convolutional Network for Object Detection

Existing region-based object detectors are limited to regions with fixed box geometry to represent objects, even if those are highly non-rectangular. In this paper we introduce DP-FCN, a deep model for object detection which explicitly adapts to shapes of objects with deformable parts. Without additional annotations, it learns to focus on discriminative elements and to align them, and simultaneously brings more invariance for classification and geometric information to refine localization. DP-FCN is composed of three main modules: a Fully Convolutional Network to efficiently maintain spatial resolution, a deformable part-based RoI pooling layer to optimize positions of parts and build invariance, and a deformation-aware localization module explicitly exploiting displacements of parts to improve accuracy of bounding box regression. We experimentally validate our model and show significant gains. DP-FCN achieves state-of-the-art performances of 83.1% and 80.9% on PASCAL VOC 2007 and 2012 with VOC data only.Comment: Accepted to BMVC 2017 (oral

Point-cloud based 3D object detection and classification methods for self-driving applications: A survey and taxonomy

Autonomous vehicles are becoming central for the future of mobility, supported by advances in deep learning techniques. The performance of aself-driving system is highly dependent on the quality of the perception task. Developments in sensor technologies have led to an increased availability of 3D scanners such as LiDAR, allowing for a more accurate representation of the vehicle's surroundings, leading to safer systems. The rapid development and consequent rise of research studies around self-driving systems since early 2010, resulted in a tremendous increase in the number and novelty of object detection methods. After the first wave of works that essentially tried to expand known techniques from object detection in images, more recently there has been a notable development in newer and more adapted to LiDAR data works. This paper addresses the existing literature on object detection using LiDAR data within the scope of self-driving and brings a systematic way for analysing it. Unlike general object detection surveys, we will focus on point-cloud data, which presents specific challenges, notably its high-dimensional and sparse nature. This work introduces a common object detection pipeline and taxonomy to facilitate a thorough comparison between different techniques and, departing from it, this work will critically examine the representation of data (critical for complexity reduction), feature extraction and finally the object detection models. A comparison between performance results of the different models is included, alongside with some future research challenges.This work is supported by European Structural and Investment Funds in the FEDER component, through the Operational Competitiveness and Internationalization Programme (COMPETE 2020) [Project n. 037902; Funding Reference: POCI-01-0247-FEDER-037902]

The Group Loss++: A deeper look into group loss for deep metric learning

Deep metric learning has yielded impressive results in tasks such as clustering and image retrieval by leveraging neural networks to obtain highly discriminative feature embeddings, which can be used to group samples into different classes. Much research has been devoted to the design of smart loss functions or data mining strategies for training such networks. Most methods consider only pairs or triplets of samples within a mini-batch to compute the loss function, which is commonly based on the distance between embeddings. We propose Group Loss, a loss function based on a differentiable label-propagation method that enforces embedding similarity across all samples of a group while promoting, at the same time, low-density regions amongst data points belonging to different groups. Guided by the smoothness assumption that '`similar objects should belong to the same group'', the proposed loss trains the neural network for a classification task, enforcing a consistent labelling amongst samples within a class. We design a set of inference strategies tailored towards our algorithm, named Group Loss++ that further improve the results of our model. We show state-of-the-art results on clustering and image retrieval on four retrieval datasets, and present competitive results on two person re-identification datasets, providing a unified framework for retrieval and re-identification

The Group Loss++: A deeper look into group loss for deep metric learning

Deep metric learning has yielded impressive results in tasks such as clustering and image retrieval by leveraging neural networks to obtain highly discriminative feature embeddings, which can be used to group samples into different classes. Much research has been devoted to the design of smart loss functions or data mining strategies for training such networks. Most methods consider only pairs or triplets of samples within a mini-batch to compute the loss function, which is commonly based on the distance between embeddings. We propose Group Loss, a loss function based on a differentiable label-propagation method that enforces embedding similarity across all samples of a group while promoting, at the same time, low-density regions amongst data points belonging to different groups. Guided by the smoothness assumption that "similar objects should belong to the same group", the proposed loss trains the neural network for a classification task, enforcing a consistent labelling amongst samples within a class. We design a set of inference strategies tailored towards our algorithm, named Group Loss++ that further improve the results of our model. We show state-of-the-art results on clustering and image retrieval on four retrieval datasets, and present competitive results on two person re-identification datasets, providing a unified framework for retrieval and re-identification.Comment: Accepted to IEEE Transactions on Pattern Analysis and Machine Intelligence (tPAMI), 2022. Includes supplementary materia