Community next steps for making globally unique identifiers work for biocollections data

Biodiversity data is being digitized and made available online at a rapidly increasing rate but current practices typically do not preserve linkages between these data, which impedes interoperation, provenance tracking, and assembly of larger datasets. For data associated with biocollections, the biodiversity community has long recognized that an essential part of establishing and preserving linkages is to apply globally unique identifiers at the point when data are generated in the field and to persist these identifiers downstream, but this is seldom implemented in practice. There has neither been coalescence towards one single identifier solution (as in some other domains), nor even a set of recommended best practices and standards to support multiple identifier schemes sharing consistent responses. In order to further progress towards a broader community consensus, a group of biocollections and informatics experts assembled in Stockholm in October 2014 to discuss community next steps to overcome current roadblocks. The workshop participants divided into four groups focusing on: identifier practice in current field biocollections; identifier application for legacy biocollections; identifiers as applied to biodiversity data records as they are published and made available in semantically marked-up publications; and cross-cutting identifier solutions that bridge across these domains. The main outcome was consensus on key issues, including recognition of differences between legacy and new biocollections processes, the need for identifier metadata profiles that can report information on identifier persistence missions, and the unambiguous indication of the type of object associated with the identifier. Current identifier characteristics are also summarized, and an overview of available schemes and practices is provided

The OpenKnowledge System: An Interaction-Centered Approach to Knowledge Sharing

Abstract. The information that is made available through the semantic web will be accessed through complex programs (web-services, sensors, etc.)thatmayinteract in sophisticated ways. Composition guided simply by the specifications of programs ’ inputs and outputs is insufficient to obtain reliable aggregate performance- hence the recognised need for process models to specify the interactions required between programs. These interaction models, however, are traditionally viewed as a consequence of service composition rather than as the focal point for facilitating composition. We describe an operational system that uses models of interaction as the focus for knowledge exchange. Our implementation adopts a peer to peer architecture, thus making minimal assumptions about centralisation of knowledge sources, discovery and interaction control.

Distributed Web Service Coordination for Collaboration Applications and Biological Workflows

In this dissertation work, we have investigated the main research thrust of decentralized coordination of workflows over web services. To address distributed workflow coordination, first we have developed “Web Coordination Bonds” as a capable set of dependency modeling primitives that enable each web service to manage its own dependencies. Web bond primitives are as powerful as extended Petri nets and have sufficient modeling and expressive capabilities to model workflow dependencies. We have designed and prototyped our “Web Service Coordination Management Middleware” (WSCMM) system that enhances current web services infrastructure to accommodate web bond enabled web services. Finally, based on core concepts of web coordination bonds and WSCMM, we have developed the “BondFlow” system that allows easy configuration distributed coordination of workflows. The footprint of the BonFlow runtime is 24KB and the additional third party software packages, SOAP client and XML parser, account for 115KB

Improving Collaborative Learning Using Pervasive Embedded System-Based Multi-Agent Information and Retrieval Framework in Educational Systems

E-learning is a form of Technology SupportedEducation where the medium of instruction is throughDigital Technologies, particularly Computer Technology.An instance is the use of search engines like Google andYahoo, which aid Collaborative Learning. However, thewidespread provision of distributed, semi-structuredinformation resources such as the Web has obviouslybrought a lot of benefits; but it also has a number ofdifficulties. These difficulties include people gettingoverwhelmed by the sheer amount of information available,making it hard for them to filter out the junk andirrelevancies and focus on what is important, and also toactively search for the right information. Also, people easilyget bored or confused while browsing the Web because ofthe hypertext nature of the web, while making it easy to linkrelated documents together, it can also be disorienting. Toalleviate these problems, the Web Information Food ChainModel was introduced. How effective has this been with thedynamic nature of computing technologies? Pervasivecomputing devices enable people to gain immediate accessto information and services anywhere, anytime, withouthaving to carry around heavy and impractical computingdevices. Thus, the bulky PCs become less attractive andbeing slowly eroded with the development of a newgeneration of smart devices like wireless PDAs, smartphones, etc. These embedded devices are characterized bybeing unobtrusively embedded; completely connected;intuitively intelligent; effortlessly portable and mobile; andconstantly on and available. This paper presents the use ofembedded systems and Intelligent Agent-Based WebInformation Food Chain Model in Multi-Agent Informationand Retrieval Framework (IIFCEMAF), to realizing fullpotentials of the internet, for users’ improved system ofcollaborative e-learning in education

Forum Session at the First International Conference on Service Oriented Computing (ICSOC03)

The First International Conference on Service Oriented Computing (ICSOC) was held in Trento, December 15-18, 2003. The focus of the conference ---Service Oriented Computing (SOC)--- is the new emerging paradigm for distributed computing and e-business processing that has evolved from object-oriented and component computing to enable building agile networks of collaborating business applications distributed within and across organizational boundaries. Of the 181 papers submitted to the ICSOC conference, 10 were selected for the forum session which took place on December the 16th, 2003. The papers were chosen based on their technical quality, originality, relevance to SOC and for their nature of being best suited for a poster presentation or a demonstration. This technical report contains the 10 papers presented during the forum session at the ICSOC conference. In particular, the last two papers in the report ere submitted as industrial papers

An Optimized, Data Distribution Service-Based Solution for Reliable Data Exchange Among Autonomous Underwater Vehicles

Major challenges are presented when managing a large number of heterogeneous vehicles that have to communicate underwater in order to complete a global mission in a cooperative manner. In this kind of application domain, sending data through the environment presents issues that surpass the ones found in other overwater, distributed, cyber-physical systems (i.e., low bandwidth, unreliable transport medium, data representation and hardware high heterogeneity). This manuscript presents a Publish/Subscribe-based semantic middleware solution for unreliable scenarios and vehicle interoperability across cooperative and heterogeneous autonomous vehicles. The middleware relies on different iterations of the Data Distribution Service (DDS) software standard and their combined work between autonomous maritime vehicles and a control entity. It also uses several components with different functionalities deemed as mandatory for a semantic middleware architecture oriented to maritime operations (device and service registration, context awareness, access to the application layer) where other technologies are also interweaved with middleware (wireless communications, acoustic networks). Implementation details and test results, both in a laboratory and a deployment scenario, have been provided as a way to assess the quality of the system and its satisfactory performanceEuropean Commission H2020. SWARMs European project (Smart and Networking Underwater Robots in Cooperation Meshes), under Grant Agreement No. 662107-SWARMs-ECSEL-2014-1, partially supported by the ECSEL JU, the Spanish Ministry of Economy and Competitiveness (Ref: PCIN-2014-022-C02-02)