132 research outputs found
Removing Ocular Movement Artefacts by a Joint Smoothened Subspace Estimator
To cope with the severe masking of background cerebral activity in the electroencephalogram (EEG) by ocular movement artefacts, we present a method which combines lower-order, short-term and higher-order, long-term statistics. The joint smoothened subspace estimator (JSSE) calculates the joint information in both statistical models, subject to the constraint that the resulting estimated source should be sufficiently smooth in the time domain (i.e., has a large autocorrelation or self predictive power). It is shown that the JSSE is able to estimate a component from simulated data that is superior with respect to methodological artefact suppression to those of FastICA, SOBI, pSVD, or JADE/COM1 algorithms used for blind source separation (BSS). Interference and distortion suppression are of comparable order when compared with the above-mentioned methods. Results on patient data demonstrate that the method is able to suppress blinking and saccade artefacts in a fully automated way
Técnicas baseadas em subespaços e aplicações
Doutoramento em Engenharia ElectrónicaEste trabalho focou-se no estudo de técnicas de sub-espaço tendo em vista as
aplicações seguintes: eliminação de ruído em séries temporais e extracção de
características para problemas de classificação supervisionada. Foram estudadas
as vertentes lineares e não-lineares das referidas técnicas tendo como ponto de
partida os algoritmos SSA e KPCA. No trabalho apresentam-se propostas para
optimizar os algoritmos, bem como uma descrição dos mesmos numa abordagem
diferente daquela que é feita na literatura. Em qualquer das vertentes, linear ou
não-linear, os métodos são apresentados utilizando uma formulação algébrica
consistente. O modelo de subespaço é obtido calculando a decomposição em
valores e vectores próprios das matrizes de kernel ou de correlação/covariância
calculadas com um conjunto de dados multidimensional.
A complexidade das técnicas não lineares de subespaço é discutida,
nomeadamente, o problema da pre-imagem e a decomposição em valores e
vectores próprios de matrizes de dimensão elevada. Diferentes algoritmos de préimagem
são apresentados bem como propostas alternativas para a sua
optimização. A decomposição em vectores próprios da matriz de kernel baseada
em aproximações low-rank da matriz conduz a um algoritmo mais eficiente- o
Greedy KPCA.
Os algoritmos são aplicados a sinais artificiais de modo a estudar a influência dos
vários parâmetros na sua performance. Para além disso, a exploração destas
técnicas é extendida à eliminação de artefactos em séries temporais biomédicas
univariáveis, nomeadamente, sinais EEG.This work focuses on the study of linear and non-linear subspace projective
techniques with two intents: noise elimination and feature extraction. The
conducted study is based on the SSA, and Kernel PCA algorithms.
Several approaches to optimize the algorithms are addressed along with a
description of those algorithms in a distinct approach from the one made in the
literature. All methods presented here follow a consistent algebraic formulation
to manipulate the data. The subspace model is formed using the elements from
the eigendecomposition of kernel or correlation/covariance matrices computed
on multidimensional data sets.
The complexity of non-linear subspace techniques is exploited, namely the preimage
problem and the kernel matrix dimensionality. Different pre-image
algorithms are presented together with alternative proposals to optimize them.
In this work some approximations to the kernel matrix based on its low rank
approximation are discussed and the Greedy KPCA algorithm is introduced.
Throughout this thesis, the algorithms are applied to artificial signals in order to
study the influence of the several parameters in their performance.
Furthermore, the exploitation of these techniques is extended to artefact
removal in univariate biomedical time series, namely, EEG signals.FCT - SFRH/BD/28404/200
Review of Artifact Rejection Methods for Electroencephalographic Systems
Technologies using electroencephalographic (EEG) signals have been penetrated into public by the development of EEG systems. During EEG system operation, recordings ought to be obtained under no restriction of movement for routine use in the real world. However, the lack of consideration of situational behavior constraints will cause technical/biological artifacts that often mixed with EEG signals and make the signal processing difficult in all respects by ingeniously disguising themselves as EEG components. EEG systems integrating gold standard or specialized device in their processing strategies would appear as daily tools in the future if they are unperturbed to such obstructions. In this chapter, we describe algorithms for artifact rejection in multi-/single-channel. In particular, some existing single-channel artifact rejection methods that will exhibit beneficial information to improve their performance in online EEG systems were summarized by focusing on the advantages and disadvantages of algorithms
Artifact removal in magnetoencephalogram background activity with independent component analysis
The aim of this study was to assess whether independent component analysis (ICA) could be valuable to remove power line noise, cardiac, and ocular artifacts from magnetoencephalogram (MEG) background activity. The MEGs were recorded from 11 subjects with a 148-channel whole-head magnetometer. We used a statistical criterion to estimate the number of independent components. Then, a robust ICA algorithm decomposed the MEG epochs and several methods were applied to detect those artifacts. The whole process had been previously tested on synthetic data. We found that the line noise components could be easily detected by their frequency spectrum. In addition, the ocular artifacts could be identified by their frequency characteristics and scalp topography. Moreover, the cardiac artifact was better recognized by its skewness value than by its kurtosis one. Finally, the MEG signals were compared before and after artifact rejection to evaluate our method
VME-DWT : an efficient algorithm for detection and elimination of eye blink from short segments of single EEG channel
Objective: Recent advances in development of low-cost single-channel electroencephalography (EEG)
headbands have opened new possibilities for applications in health monitoring and brain-computer interface (BCI) systems. These recorded EEG signals, however, are often contaminated by eye blink artifacts that can yield the fallacious interpretation of the brain activity. This paper proposes an
efficient algorithm, VME-DWT, to remove eye blinks in a short segment of the single EEG channel. Method: The proposed algorithm: (a) locates eye blink intervals using Variational Mode Extraction (VME) and (b) filters only contaminated EEG interval using an automatic Discrete Wavelet Transform (DWT) algorithm. The performance of VME-DWT is compared with an automatic Variational Mode Decomposition (AVMD) and a DWT-based algorithms, proposed for suppressing eye blinks in a short segment of the single EEG channel. Results: The VME-DWT detects and filters 95% of the eye blinks from the contaminated EEG signals with SNR ranging from −8 to +3 dB. The VME-DWT shows superiority to the AVMD and DWT with the higher mean value of correlation coefficient (0.92 vs. 0.83, 0.58) and lower
mean value of RRMSE (0.42 vs. 0.59, 0.87). Significance: The VME-DWT can be a suitable algorithm for removal of eye blinks in low-cost single-channel EEG systems as it is: (a) computationally-efficient, the contaminated EEG signal is filtered in millisecond time resolution, (b) automatic, no human intervention is required, (c) low-invasive, EEG intervals without contamination remained unaltered, and (d) low-complexity, without need to the artifact reference
Comparative analysis of TMS-EEG signal using different approaches in healthy subjects
openThe integration of transcranial magnetic stimulation with electroencephalography (TMS-EEG) represents a useful non-invasive approach to assess cortical excitability, plasticity and intra-cortical connectivity in humans in physiological and pathological conditions.
However, biological and environmental noise sources can contaminate the TMS-evoked potentials (TEPs). Therefore, signal preprocessing represents a fundamental step in the analysis of these potentials and is critical to remove artefactual components while preserving the physiological brain activity.
The objective of the present study is to evaluate the effects of different signal processing pipelines, (namely Leodori et al., Rogasch et al., Mutanen et al.) applied on TEPs recorded in five healthy volunteers after TMS stimulation of the primary motor cortex (M1) of the dominant hemisphere. These pipelines were used and compared to remove artifacts and improve the quality of the recorded signals, laying the foundation for subsequent analyses. Various algorithms, such as Independent Component Analysis (ICA), SOUND, and SSP-SIR, were used in each pipeline.
Furthermore, after signal preprocessing, current localization was performed to map the TMS-induced neural activation in the cortex. This methodology provided valuable information on the spatial distribution of activity and further validated the effectiveness of the signal cleaning pipelines.
Comparing the effects of the different pipelines on the same dataset, we observed considerable variability in how the pipelines affect various signal characteristics. We observed significant differences in the effects on signal amplitude and in the identification and characterisation of peaks of interest, i.e., P30, N45, P60, N100, P180. The identification and characteristics of these peaks showed variability, especially with regard to the early peaks, which reflect the cortical excitability of the stimulated area and are the more affected by biological and stimulation-related artifacts.
Despite these differences, the topographies and source localisation, which are the most informative and useful in reconstructing signal dynamics, were consistent and reliable between the different pipelines considered.
The results suggest that the existing methodologies for analysing TEPs produce different effects on the data, but are all capable of reproducing the dynamics of the signal and its components. Future studies evaluating different signal preprocessing methods in larger populations are needed to determine an appropriate workflow that can be shared through the scientific community, in order to make the results obtained in different centres comparable
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