Statistical mechanics of the vertex-cover problem

We review recent progress in the study of the vertex-cover problem (VC). VC belongs to the class of NP-complete graph theoretical problems, which plays a central role in theoretical computer science. On ensembles of random graphs, VC exhibits an coverable-uncoverable phase transition. Very close to this transition, depending on the solution algorithm, easy-hard transitions in the typical running time of the algorithms occur. We explain a statistical mechanics approach, which works by mapping VC to a hard-core lattice gas, and then applying techniques like the replica trick or the cavity approach. Using these methods, the phase diagram of VC could be obtained exactly for connectivities $c<e$, where VC is replica symmetric. Recently, this result could be confirmed using traditional mathematical techniques. For $c>e$, the solution of VC exhibits full replica symmetry breaking. The statistical mechanics approach can also be used to study analytically the typical running time of simple complete and incomplete algorithms for VC. Finally, we describe recent results for VC when studied on other ensembles of finite- and infinite-dimensional graphs.Comment: review article, 26 pages, 9 figures, to appear in J. Phys. A: Math. Ge

A Tutorial on Clique Problems in Communications and Signal Processing

Since its first use by Euler on the problem of the seven bridges of K\"onigsberg, graph theory has shown excellent abilities in solving and unveiling the properties of multiple discrete optimization problems. The study of the structure of some integer programs reveals equivalence with graph theory problems making a large body of the literature readily available for solving and characterizing the complexity of these problems. This tutorial presents a framework for utilizing a particular graph theory problem, known as the clique problem, for solving communications and signal processing problems. In particular, the paper aims to illustrate the structural properties of integer programs that can be formulated as clique problems through multiple examples in communications and signal processing. To that end, the first part of the tutorial provides various optimal and heuristic solutions for the maximum clique, maximum weight clique, and $k$-clique problems. The tutorial, further, illustrates the use of the clique formulation through numerous contemporary examples in communications and signal processing, mainly in maximum access for non-orthogonal multiple access networks, throughput maximization using index and instantly decodable network coding, collision-free radio frequency identification networks, and resource allocation in cloud-radio access networks. Finally, the tutorial sheds light on the recent advances of such applications, and provides technical insights on ways of dealing with mixed discrete-continuous optimization problems

Planarity testing and embedding algorithms.

Thesis (M.Sc.)-University of Natal, Durban,1990.This thesis deals with several aspects of planar graphs, and some of the problems associated with non-planar graphs. Chapter 1 is devoted to introducing some of the fundamental notation and tools used in the remainder of the thesis. Graphs serve as useful models of electronic circuits. It is often of interest to know if a given electronic circuit has a layout on the plane so that no two wires cross. In Chapter 2, three efficient algorithms are described for determining whether a given 2-connected graph (which may model such a circuit) is planar. The first planarity testing algorithm uses a path addition approach. Although this algorithm is efficient, it does not have linear complexity. However, the second planarity testing algorithm has linear complexity, and uses a recursive fragment addition technique. The last planarity testing algorithm also has linear complexity, and relies on a relatively new data structure called PQ-trees which have several important applications to planar graphs. This algorithm uses a vertex addition technique. Chapter 3 further develops the idea of modelling an electronic circuit using a graph. Knowing that a given electronic circuit may be placed in the plane with no wires crossing is often insufficient. For example, some electronic circuits often have in excess of 100 000 nodes. Thus, obtaining a description of such a layout is important. In Chapter 3 we study two algorithms for obtaining such a description, both of which rely on the PQ-tree data structure. The first algorithm determines a rotational embedding of a 2-connected graph. Given a rotational embedding of a 2-connected graph, the second algorithm determines if a convex drawing of a graph is possible. If a convex drawing is possible, then we output the convex drawing. In Chapter 4, we concern ourselves with graphs that have failed a planarity test of Chapter 2. This is of particular importance, since complex electronic circuits often do not allow a layout on the plane. We study three different ways of approaching the problem of an electronic circuit modelled on a non-planar graph, all of which use the PQ-tree data structure. We study an algorithm for finding an upper bound on the thickness of a graph, an algorithm for determining the subgraphs of a non-planar graph which are subdivisions of the Kuratowski graphs K5 and K3,3, and lastly we present a new algorithm for finding an upper bound on the genus of a non-planar graph

Why-Query Support in Graph Databases

In the last few decades, database management systems became powerful tools for storing large amount of data and executing complex queries over them. In addition to extended functionality, novel types of databases appear like triple stores, distributed databases, etc. Graph databases implementing the property-graph model belong to this development branch and provide a new way for storing and processing data in the form of a graph with nodes representing some entities and edges describing connections between them. This consideration makes them suitable for keeping data without a rigid schema for use cases like social-network processing or data integration. In addition to a flexible storage, graph databases provide new querying possibilities in the form of path queries, detection of connected components, pattern matching, etc. However, the schema flexibility and graph queries come with additional costs. With limited knowledge about data and little experience in constructing the complex queries, users can create such ones, which deliver unexpected results. Forced to debug queries manually and overwhelmed by the amount of query constraints, users can get frustrated by using graph databases. What is really needed, is to improve usability of graph databases by providing debugging and explaining functionality for such situations. We have to assist users in the discovery of what were the reasons of unexpected results and what can be done in order to fix them. The unexpectedness of result sets can be expressed in terms of their size or content. In the first case, users have to solve the empty-answer, too-many-, or too-few-answers problems. In the second case, users care about the result content and miss some expected answers or wonder about presence of some unexpected ones. Considering the typical problems of receiving no or too many results by querying graph databases, in this thesis we focus on investigating the problems of the first group, whose solutions are usually represented by why-empty, why-so-few, and why-so-many queries. Our objective is to extend graph databases with debugging functionality in the form of why-queries for unexpected query results on the example of pattern matching queries, which are one of general graph-query types. We present a comprehensive analysis of existing debugging tools in the state-of-the-art research and identify their common properties. From them, we formulate the following features of why-queries, which we discuss in this thesis, namely: holistic support of different cardinality-based problems, explanation of unexpected results and query reformulation, comprehensive analysis of explanations, and non-intrusive user integration. To support different cardinality-based problems, we develop methods for explaining no, too few, and too many results. To cover different kinds of explanations, we present two types: subgraph- and modification-based explanations. The first type identifies the reasons of unexpectedness in terms of query subgraphs and delivers differential graphs as answers. The second one reformulates queries in such a way that they produce better results. Considering graph queries to be complex structures with multiple constraints, we investigate different ways of generating explanations starting from the most general one that considers only a query topology through coarse-grained rewriting up to fine-grained modification that allows fine changes of predicates and topology. To provide a comprehensive analysis of explanations, we propose to compare them on three levels including a syntactic description, a content, and a size of a result set. In order to deliver user-aware explanations, we discuss two models for non-intrusive user integration in the generation process. With the techniques proposed in this thesis, we are able to provide fundamentals for debugging of pattern-matching queries, which deliver no, too few, or too many results, in graph databases implementing the property-graph model

A graph theory model for the computer solution of university time-tables and related problems

The work described in this thesis is concerned with four main fields of investigation, three concerned with the problems of a university administration in producing time-tables, and one concerned with the theory of graphs which provides a convenient mathematical model of a university course-student structure. A university administration's time-table problems may be classified under these headings: 1. the production of examination time-tables, 2. the assignment of students to classes, and 3. the production of class-teacher-room time-tables. These three problems are a class of the general combinatorial problem and thus simple enumeration will, in theory, provide a solution. This thesis describes and evaluates several algorithmic methods of solution and several heuristic approaches to reduce the combinatorial difficulties of the problems. Although heuristic methods do not guarantee the finding of an optimal solution, or, in some cases, any solution at all, the success of particular heuristics is demonstrated an actual course-student data. A new algorithmic method is proposed for the construction of class-teacher-room time-tables. The feasibility of this method is demonstrated with a non-trivial example based on a game. The thesis concludes with an investigation of the theory of graphs, the mathematical model used in previous work. Upper and lower bounds for the chromatic number of a graph are developed and procedures for reducing the size of the problem are constructed and discussed. An algorithm for finding all the complete subgraphs of a graph is developed as an aid in determining the solution to parts of the time-table problem. This is then related to several theorems concerning the eigenvalues and eigenvectors of the matrices associated with graphs and their meaning in the terms of the structure of these graphs. This leads readily to a bound, involving eigenvalues, for the size of the largest complete subgraph in any given graph. The graph theory section ends with a short note on the four colour problem

Solving hard subgraph problems in parallel

This thesis improves the state of the art in exact, practical algorithms for finding subgraphs. We study maximum clique, subgraph isomorphism, and maximum common subgraph problems. These are widely applicable: within computing science, subgraph problems arise in document clustering, computer vision, the design of communication protocols, model checking, compiler code generation, malware detection, cryptography, and robotics; beyond, applications occur in biochemistry, electrical engineering, mathematics, law enforcement, fraud detection, fault diagnosis, manufacturing, and sociology. We therefore consider both the ``pure'' forms of these problems, and variants with labels and other domain-specific constraints. Although subgraph-finding should theoretically be hard, the constraint-based search algorithms we discuss can easily solve real-world instances involving graphs with thousands of vertices, and millions of edges. We therefore ask: is it possible to generate ``really hard'' instances for these problems, and if so, what can we learn? By extending research into combinatorial phase transition phenomena, we develop a better understanding of branching heuristics, as well as highlighting a serious flaw in the design of graph database systems. This thesis also demonstrates how to exploit two of the kinds of parallelism offered by current computer hardware. Bit parallelism allows us to carry out operations on whole sets of vertices in a single instruction---this is largely routine. Thread parallelism, to make use of the multiple cores offered by all modern processors, is more complex. We suggest three desirable performance characteristics that we would like when introducing thread parallelism: lack of risk (parallel cannot be exponentially slower than sequential), scalability (adding more processing cores cannot make runtimes worse), and reproducibility (the same instance on the same hardware will take roughly the same time every time it is run). We then detail the difficulties in guaranteeing these characteristics when using modern algorithmic techniques. Besides ensuring that parallelism cannot make things worse, we also increase the likelihood of it making things better. We compare randomised work stealing to new tailored strategies, and perform experiments to identify the factors contributing to good speedups. We show that whilst load balancing is difficult, the primary factor influencing the results is the interaction between branching heuristics and parallelism. By using parallelism to explicitly offset the commitment made to weak early branching choices, we obtain parallel subgraph solvers which are substantially and consistently better than the best sequential algorithms

A contribution to the evaluation and optimization of networks reliability

L’évaluation de la fiabilité des réseaux est un problème combinatoire très complexe qui nécessite des moyens de calcul très puissants. Plusieurs méthodes ont été proposées dans la littérature pour apporter des solutions. Certaines ont été programmées dont notamment les méthodes d’énumération des ensembles minimaux et la factorisation, et d’autres sont restées à l’état de simples théories. Cette thèse traite le cas de l’évaluation et l’optimisation de la fiabilité des réseaux. Plusieurs problèmes ont été abordés dont notamment la mise au point d’une méthodologie pour la modélisation des réseaux en vue de l’évaluation de leur fiabilités. Cette méthodologie a été validée dans le cadre d’un réseau de radio communication étendu implanté récemment pour couvrir les besoins de toute la province québécoise. Plusieurs algorithmes ont aussi été établis pour générer les chemins et les coupes minimales pour un réseau donné. La génération des chemins et des coupes constitue une contribution importante dans le processus d’évaluation et d’optimisation de la fiabilité. Ces algorithmes ont permis de traiter de manière rapide et efficace plusieurs réseaux tests ainsi que le réseau de radio communication provincial. Ils ont été par la suite exploités pour évaluer la fiabilité grâce à une méthode basée sur les diagrammes de décision binaire. Plusieurs contributions théoriques ont aussi permis de mettre en place une solution exacte de la fiabilité des réseaux stochastiques imparfaits dans le cadre des méthodes de factorisation. A partir de cette recherche plusieurs outils ont été programmés pour évaluer et optimiser la fiabilité des réseaux. Les résultats obtenus montrent clairement un gain significatif en temps d’exécution et en espace de mémoire utilisé par rapport à beaucoup d’autres implémentations. Mots-clés: Fiabilité, réseaux, optimisation, diagrammes de décision binaire, ensembles des chemins et coupes minimales, algorithmes, indicateur de Birnbaum, systèmes de radio télécommunication, programmes.Efficient computation of systems reliability is required in many sensitive networks. Despite the increased efficiency of computers and the proliferation of algorithms, the problem of finding good and quickly solutions in the case of large systems remains open. Recently, efficient computation techniques have been recognized as significant advances to solve the problem during a reasonable period of time. However, they are applicable to a special category of networks and more efforts still necessary to generalize a unified method giving exact solution. Assessing the reliability of networks is a very complex combinatorial problem which requires powerful computing resources. Several methods have been proposed in the literature. Some have been implemented including minimal sets enumeration and factoring methods, and others remained as simple theories. This thesis treats the case of networks reliability evaluation and optimization. Several issues were discussed including the development of a methodology for modeling networks and evaluating their reliabilities. This methodology was validated as part of a radio communication network project. In this work, some algorithms have been developed to generate minimal paths and cuts for a given network. The generation of paths and cuts is an important contribution in the process of networks reliability and optimization. These algorithms have been subsequently used to assess reliability by a method based on binary decision diagrams. Several theoretical contributions have been proposed and helped to establish an exact solution of the stochastic networks reliability in which edges and nodes are subject to failure using factoring decomposition theorem. From this research activity, several tools have been implemented and results clearly show a significant gain in time execution and memory space used by comparison to many other implementations. Key-words: Reliability, Networks, optimization, binary decision diagrams, minimal paths set and cuts set, algorithms, Birnbaum performance index, Networks, radio-telecommunication systems, programs