Non-hierarchical Structures: How to Model and Index Overlaps?

Overlap is a common phenomenon seen when structural components of a digital object are neither disjoint nor nested inside each other. Overlapping components resist reduction to a structural hierarchy, and tree-based indexing and query processing techniques cannot be used for them. Our solution to this data modeling problem is TGSA (Tree-like Graph for Structural Annotations), a novel extension of the XML data model for non-hierarchical structures. We introduce an algorithm for constructing TGSA from annotated documents; the algorithm can efficiently process non-hierarchical structures and is associated with formal proofs, ensuring that transformation of the document to the data model is valid. To enable high performance query analysis in large data repositories, we further introduce an extension of XML pre-post indexing for non-hierarchical structures, which can process both reachability and overlapping relationships.Comment: The paper has been accepted at the Balisage 2014 conferenc

A D.C. Programming Approach to the Sparse Generalized Eigenvalue Problem

In this paper, we consider the sparse eigenvalue problem wherein the goal is to obtain a sparse solution to the generalized eigenvalue problem. We achieve this by constraining the cardinality of the solution to the generalized eigenvalue problem and obtain sparse principal component analysis (PCA), sparse canonical correlation analysis (CCA) and sparse Fisher discriminant analysis (FDA) as special cases. Unlike the $\ell_1$-norm approximation to the cardinality constraint, which previous methods have used in the context of sparse PCA, we propose a tighter approximation that is related to the negative log-likelihood of a Student's t-distribution. The problem is then framed as a d.c. (difference of convex functions) program and is solved as a sequence of convex programs by invoking the majorization-minimization method. The resulting algorithm is proved to exhibit \emph{global convergence} behavior, i.e., for any random initialization, the sequence (subsequence) of iterates generated by the algorithm converges to a stationary point of the d.c. program. The performance of the algorithm is empirically demonstrated on both sparse PCA (finding few relevant genes that explain as much variance as possible in a high-dimensional gene dataset) and sparse CCA (cross-language document retrieval and vocabulary selection for music retrieval) applications.Comment: 40 page

An LSH Index for Computing Kendall's Tau over Top-k Lists

We consider the problem of similarity search within a set of top-k lists under the Kendall's Tau distance function. This distance describes how related two rankings are in terms of concordantly and discordantly ordered items. As top-k lists are usually very short compared to the global domain of possible items to be ranked, creating an inverted index to look up overlapping lists is possible but does not capture tight enough the similarity measure. In this work, we investigate locality sensitive hashing schemes for the Kendall's Tau distance and evaluate the proposed methods using two real-world datasets.Comment: 6 pages, 8 subfigures, presented in Seventeenth International Workshop on the Web and Databases (WebDB 2014) co-located with ACM SIGMOD201

Ptolemaic Indexing

This paper discusses a new family of bounds for use in similarity search, related to those used in metric indexing, but based on Ptolemy's inequality, rather than the metric axioms. Ptolemy's inequality holds for the well-known Euclidean distance, but is also shown here to hold for quadratic form metrics in general, with Mahalanobis distance as an important special case. The inequality is examined empirically on both synthetic and real-world data sets and is also found to hold approximately, with a very low degree of error, for important distances such as the angular pseudometric and several Lp norms. Indexing experiments demonstrate a highly increased filtering power compared to existing, triangular methods. It is also shown that combining the Ptolemaic and triangular filtering can lead to better results than using either approach on its own

Phaseless VLBI mapping of compact extragalactic radio sources

The problem of phaseless aperture synthesis is of current interest in phase-unstable VLBI with a small number of elements when either the use of closure phases is not possible (a two-element interferometer) or their quality and number are not enough for acceptable image reconstruction by standard adaptive calibration methods. Therefore, we discuss the problem of unique image reconstruction only from the spectrum magnitude of a source. We suggest an efficient method for phaseless VLBI mapping of compact extragalactic radio sources. This method is based on the reconstruction of the spectrum magnitude for a source on the entire UV plane from the measured visibility magnitude on a limited set of points and the reconstruction of the sought-for image of the source by Fienup's method from the spectrum magnitude reconstructed at the first stage. We present the results of our mapping of the extragalactic radio source 2200 +420 using astrometric and geodetic observations on a global VLBI array. Particular attention is given to studying the capabilities of a two-element interferometer in connection with the putting into operation of a Russian-made radio interferometer based on Quasar RT-32 radio telescopes.Comment: 21 pages, 6 figure