Multi-references shape constraint for snakes

In this research, we intend to present a new method of snakes with an invariant shape prior. We consider the general case where different templates are available and we have to choose the most suitable ones to define the shape constraint. A new external force is then proposed which is able to take into account several references at the same time with proportional weighting factors. Both a Fourier based shape alignment method and a complete and stable set of shape descriptors are used to ensure invariance and robustness of the prior knowledge to Euclidean transformations. To illustrate the efficiency of our approach, a set of experiments are applied on synthetic and real data. Promising results are obtained and commented

Fourier-based geometric shape prior for snakes

International audienceA novel method of snakes with shape prior is presented in this paper. We propose to add a new force which makes the curve evolve to particular shape corresponding to a template to overcome some well-known problems of snakes. The template is an instance or a sketch of the researched contour without knowing its exact geometric pose in the image. The prior information is introduced through a set of complete and locally stable invariants to Euclidean transformations (translation, rotation and scale factor) computed using Fourier Transform on contours. The method is evaluated with the segmentation of myocardial scintigraphy slices and the tracking of an object in a video sequence

Statistical Model of Shape Moments with Active Contour Evolution for Shape Detection and Segmentation

This paper describes a novel method for shape representation and robust image segmentation. The proposed method combines two well known methodologies, namely, statistical shape models and active contours implemented in level set framework. The shape detection is achieved by maximizing a posterior function that consists of a prior shape probability model and image likelihood function conditioned on shapes. The statistical shape model is built as a result of a learning process based on nonparametric probability estimation in a PCA reduced feature space formed by the Legendre moments of training silhouette images. A greedy strategy is applied to optimize the proposed cost function by iteratively evolving an implicit active contour in the image space and subsequent constrained optimization of the evolved shape in the reduced shape feature space. Experimental results presented in the paper demonstrate that the proposed method, contrary to many other active contour segmentation methods, is highly resilient to severe random and structural noise that could be present in the data

A higher-order active contour model of a `gas of circles' and its application to tree crown extraction

Many image processing problems involve identifying the region in the image domain occupied by a given entity in the scene. Automatic solution of these problems requires models that incorporate significant prior knowledge about the shape of the region. Many methods for including such knowledge run into difficulties when the topology of the region is unknown a priori, for example when the entity is composed of an unknown number of similar objects. Higher-order active contours (HOACs) represent one method for the modelling of non-trivial prior knowledge about shape without necessarily constraining region topology, via the inclusion of non-local interactions between region boundary points in the energy defining the model. The case of an unknown number of circular objects arises in a number of domains, e.g. medical, biological, nanotechnological, and remote sensing imagery. Regions composed of an a priori unknown number of circles may be referred to as a `gas of circles'. In this report, we present a HOAC model of a `gas of circles'. In order to guarantee stable circles, we conduct a stability analysis via a functional Taylor expansion of the HOAC energy around a circular shape. This analysis fixes one of the model parameters in terms of the others and constrains the rest. In conjunction with a suitable likelihood energy, we apply the model to the extraction of tree crowns from aerial imagery, and show that the new model outperforms other techniques

Image processing for plastic surgery planning

This thesis presents some image processing tools for plastic surgery planning. In particular, it presents a novel method that combines local and global context in a probabilistic relaxation framework to identify cephalometric landmarks used in Maxillofacial plastic surgery. It also uses a method that utilises global and local symmetry to identify abnormalities in CT frontal images of the human body. The proposed methodologies are evaluated with the help of several clinical data supplied by collaborating plastic surgeons

Part-to-whole Registration of Histology and MRI using Shape Elements

Image registration between histology and magnetic resonance imaging (MRI) is a challenging task due to differences in structural content and contrast. Too thick and wide specimens cannot be processed all at once and must be cut into smaller pieces. This dramatically increases the complexity of the problem, since each piece should be individually and manually pre-aligned. To the best of our knowledge, no automatic method can reliably locate such piece of tissue within its respective whole in the MRI slice, and align it without any prior information. We propose here a novel automatic approach to the joint problem of multimodal registration between histology and MRI, when only a fraction of tissue is available from histology. The approach relies on the representation of images using their level lines so as to reach contrast invariance. Shape elements obtained via the extraction of bitangents are encoded in a projective-invariant manner, which permits the identification of common pieces of curves between two images. We evaluated the approach on human brain histology and compared resulting alignments against manually annotated ground truths. Considering the complexity of the brain folding patterns, preliminary results are promising and suggest the use of characteristic and meaningful shape elements for improved robustness and efficiency.Comment: Paper accepted at ICCV Workshop (Bio-Image Computing

Gait recognition and understanding based on hierarchical temporal memory using 3D gait semantic folding

Gait recognition and understanding systems have shown a wide-ranging application prospect. However, their use of unstructured data from image and video has affected their performance, e.g., they are easily influenced by multi-views, occlusion, clothes, and object carrying conditions. This paper addresses these problems using a realistic 3-dimensional (3D) human structural data and sequential pattern learning framework with top-down attention modulating mechanism based on Hierarchical Temporal Memory (HTM). First, an accurate 2-dimensional (2D) to 3D human body pose and shape semantic parameters estimation method is proposed, which exploits the advantages of an instance-level body parsing model and a virtual dressing method. Second, by using gait semantic folding, the estimated body parameters are encoded using a sparse 2D matrix to construct the structural gait semantic image. In order to achieve time-based gait recognition, an HTM Network is constructed to obtain the sequence-level gait sparse distribution representations (SL-GSDRs). A top-down attention mechanism is introduced to deal with various conditions including multi-views by refining the SL-GSDRs, according to prior knowledge. The proposed gait learning model not only aids gait recognition tasks to overcome the difficulties in real application scenarios but also provides the structured gait semantic images for visual cognition. Experimental analyses on CMU MoBo, CASIA B, TUM-IITKGP, and KY4D datasets show a significant performance gain in terms of accuracy and robustness