6,444 research outputs found
Visual Integration of Data and Model Space in Ensemble Learning
Ensembles of classifier models typically deliver superior performance and can
outperform single classifier models given a dataset and classification task at
hand. However, the gain in performance comes together with the lack in
comprehensibility, posing a challenge to understand how each model affects the
classification outputs and where the errors come from. We propose a tight
visual integration of the data and the model space for exploring and combining
classifier models. We introduce a workflow that builds upon the visual
integration and enables the effective exploration of classification outputs and
models. We then present a use case in which we start with an ensemble
automatically selected by a standard ensemble selection algorithm, and show how
we can manipulate models and alternative combinations.Comment: 8 pages, 7 picture
Online Tool Condition Monitoring Based on Parsimonious Ensemble+
Accurate diagnosis of tool wear in metal turning process remains an open
challenge for both scientists and industrial practitioners because of
inhomogeneities in workpiece material, nonstationary machining settings to suit
production requirements, and nonlinear relations between measured variables and
tool wear. Common methodologies for tool condition monitoring still rely on
batch approaches which cannot cope with a fast sampling rate of metal cutting
process. Furthermore they require a retraining process to be completed from
scratch when dealing with a new set of machining parameters. This paper
presents an online tool condition monitoring approach based on Parsimonious
Ensemble+, pENsemble+. The unique feature of pENsemble+ lies in its highly
flexible principle where both ensemble structure and base-classifier structure
can automatically grow and shrink on the fly based on the characteristics of
data streams. Moreover, the online feature selection scenario is integrated to
actively sample relevant input attributes. The paper presents advancement of a
newly developed ensemble learning algorithm, pENsemble+, where online active
learning scenario is incorporated to reduce operator labelling effort. The
ensemble merging scenario is proposed which allows reduction of ensemble
complexity while retaining its diversity. Experimental studies utilising
real-world manufacturing data streams and comparisons with well known
algorithms were carried out. Furthermore, the efficacy of pENsemble was
examined using benchmark concept drift data streams. It has been found that
pENsemble+ incurs low structural complexity and results in a significant
reduction of operator labelling effort.Comment: this paper has been published by IEEE Transactions on Cybernetic
A Comparative Analysis of Ensemble Classifiers: Case Studies in Genomics
The combination of multiple classifiers using ensemble methods is
increasingly important for making progress in a variety of difficult prediction
problems. We present a comparative analysis of several ensemble methods through
two case studies in genomics, namely the prediction of genetic interactions and
protein functions, to demonstrate their efficacy on real-world datasets and
draw useful conclusions about their behavior. These methods include simple
aggregation, meta-learning, cluster-based meta-learning, and ensemble selection
using heterogeneous classifiers trained on resampled data to improve the
diversity of their predictions. We present a detailed analysis of these methods
across 4 genomics datasets and find the best of these methods offer
statistically significant improvements over the state of the art in their
respective domains. In addition, we establish a novel connection between
ensemble selection and meta-learning, demonstrating how both of these disparate
methods establish a balance between ensemble diversity and performance.Comment: 10 pages, 3 figures, 8 tables, to appear in Proceedings of the 2013
International Conference on Data Minin
TSE-IDS: A Two-Stage Classifier Ensemble for Intelligent Anomaly-based Intrusion Detection System
Intrusion detection systems (IDS) play a pivotal role in computer security by discovering and repealing malicious activities in computer networks. Anomaly-based IDS, in particular, rely on classification models trained using historical data to discover such malicious activities. In this paper, an improved IDS based on hybrid feature selection and two-level classifier ensembles is proposed. An hybrid feature selection technique comprising three methods, i.e. particle swarm optimization, ant colony algorithm, and genetic algorithm, is utilized to reduce the feature size of the training datasets (NSL-KDD and UNSW-NB15 are considered in this paper). Features are selected based on the classification performance of a reduced error pruning tree (REPT) classifier. Then, a two-level classifier ensembles based on two meta learners, i.e., rotation forest and bagging, is proposed. On the NSL-KDD dataset, the proposed classifier shows 85.8% accuracy, 86.8% sensitivity, and 88.0% detection rate, which remarkably outperform other classification techniques recently proposed in the literature. Results regarding the UNSW-NB15 dataset also improve the ones achieved by several state of the art techniques. Finally, to verify the results, a two-step statistical significance test is conducted. This is not usually considered by IDS research thus far and, therefore, adds value to the experimental results achieved by the proposed classifier
Transcription Factor-DNA Binding Via Machine Learning Ensembles
We present ensemble methods in a machine learning (ML) framework combining
predictions from five known motif/binding site exploration algorithms. For a
given TF the ensemble starts with position weight matrices (PWM's) for the
motif, collected from the component algorithms. Using dimension reduction, we
identify significant PWM-based subspaces for analysis. Within each subspace a
machine classifier is built for identifying the TF's gene (promoter) targets
(Problem 1). These PWM-based subspaces form an ML-based sequence analysis tool.
Problem 2 (finding binding motifs) is solved by agglomerating k-mer (string)
feature PWM-based subspaces that stand out in identifying gene targets. We
approach Problem 3 (binding sites) with a novel machine learning approach that
uses promoter string features and ML importance scores in a classification
algorithm locating binding sites across the genome. For target gene
identification this method improves performance (measured by the F1 score) by
about 10 percentage points over the (a) motif scanning method and (b) the
coexpression-based association method. Top motif outperformed 5 component
algorithms as well as two other common algorithms (BEST and DEME). For
identifying individual binding sites on a benchmark cross species database
(Tompa et al., 2005) we match the best performer without much human
intervention. It also improved the performance on mammalian TFs.
The ensemble can integrate orthogonal information from different weak
learners (potentially using entirely different types of features) into a
machine learner that can perform consistently better for more TFs. The TF gene
target identification component (problem 1 above) is useful in constructing a
transcriptional regulatory network from known TF-target associations. The
ensemble is easily extendable to include more tools as well as future PWM-based
information.Comment: 33 page
An ensemble approach of dual base learners for multi-class classification problems
In this work, we formalise and evaluate an ensemble of classifiers that is designed for the resolution of multi-class problems. To achieve a good accuracy rate, the base learners are built with pairwise coupled binary and multi-class classifiers. Moreover, to reduce the computational cost of the ensemble and to improve its performance, these classifiers are trained using a specific attribute subset. This proposal offers the opportunity to capture the advantages provided by binary decomposition methods, by attribute partitioning methods, and by cooperative characteristics associated with a combination of redundant base learners. To analyse the quality of this architecture, its performance has been tested on different domains, and the results have been compared to other well-known classification methods. This experimental evaluation indicates that our model is, in most cases, as accurate as these methods, but it is much more efficient. (C) 2014 Elsevier B.V. All rights reserved.This research was supported by the Spanish MICINN under Projects TRA2010-20225-C03-01, TRA 2011-29454-C03-02, and TRA 2011-29454-C03-03
- …