Sathyendranath S., Bracher A., Brockmann C., Platt T., Ramon D., Regner P. (2017) Colour and Light in the Ocean (CLEO) 2016: A Scientific Roadmap from the CLEO Workshop Organised by ESA and PML. Held at ESRIN, Frascati, Italy on 6 - 8 September, 2016.

The Colour and Light in the Ocean (CLEO) Workshop, organized by the European Space Agency (ESA) and the Plymouth Marine Laboratory (PML) was held on the ESRIN, the ESA Centre for Earth Observations, at Frascati, Italy on 6-8 September 2016. The workshop is sponsored through selected SEOM (Scientific Exploitation of Operational Missions) projects, including: Pools of Carbon in the Ocean (POCO), Photosynthetically Active Radiation and Primary Production (PPP), Synergistic Exploitation of Hyper- and Multispectral Sentinel-Measurements to Determine Phytoplankton Functional Types (PFT) (SynSenPFT), and Extreme Case-2 Waters (C2X). Additional partner projects of ESA are: Marine Photosynthesis Parameters from Space (MAPPS), a Pathfinder STSE (Support to Science Element) project; and Ocean Colour Climate Change Initiative (OC-CCI) through the CCI (Climate Change Initiative). The objectives of the workshop were to: Evaluate state-of-art Exchange information with other relevant projects and activities Bring together remote sensing community, in situ data providers, modellers and other users Explore applications in marine ecosystem models Plan for the future: Identify challenge areas and research priorities for future EO data exploitation activities Discuss key science issues and make recommendations to strengthen community engagement Shape ideas for potential new ocean-colour products to be developed in the era of the Sentinel-3 mission The workshop was organized in five themes, developed around the activities of the sponsoring projects. Each t heme had oral, poster and discussion sessions. The workshop attracted some 160 registered participants. The workshop served an important need to connect the community, to provide a forum for lively exchange of ideas, and to recommend priorities for future activities in a collective manner. The workshop brought together scientists working on development of novel products from ocean-colour data and the user community, including, notably, the modeling community. One of the key outputs of the workshop is this report, which provides the Scientific Roadmap for future activities. Another planned outcome is a Special Issue on Colour and Light in the Oceans, to be published in the Journal, which will highlight the major scientific results presented at the workshop. Each section of the report, dealing with one of the themes of the workshop, is self-contained, but cross-references to other sections are provided where appropriate. Some recommendations found common resonance across sections, such as the need for continuous, consistent, ocean-colour data streams from satellites for long-term monitoring of the marine ecosystem; the need for an integrated approach, bringing together the remote-sensing community, the in situ data providers and the modeling community; the need to promote development of novel products and advanced sensors; and the importance of providing high-quality and uninterrupted support to the user community, through easy and free access to data and products. Each section discusses the current state of the art, identifies user requirements and gaps, and priorities for research in the short and medium terms. The workshop served the important function of sounding the community’s aspirations, and presenting them in a concise manner for ESA, through this Scientific Roadmap. One of the recommendations from the participants was that CLEO workshops be organized on a regular basis in the future, to develop the ocean-colour community , to promote exchange of new results and ideas, and to plan future activities. We thank all workshop participants, keynote speakers, authors of the oral presentations and the posters, the Scientific Committee and the Organising Committee, and the Session Chairs for all their contributions to the workshop. For the logistical support and local organization and hospitality, we thank the ESRIN Graphics Bureau, Administration, Catering Service and the Events Office, especially Irene Renis, Anne Lisa Pichler and Giulia Vinicola

Inversion of inherent optical properties in optically complex waters using sentinel-3A/OLCI images: A case study using China\u27s three largest freshwater lakes

Inherent optical properties (IOPs) play an important role in underwater light field, and are difficult to estimate accurately using satellite data in optically complex waters. To study water quality in appropriate temporal and spatial scales, it is necessary to develop methods to obtain IOPs form space-based observation with quantified uncertainties. Field-measured IOP data (N = 405) were collected from 17 surveys between 2011 and 2017 in the three major largest freshwater lakes of China (Lake Chaohu, Lake Taihu, and Lake Hongze) in the lower reaches of the Yangtze River and Huai River (LYHR). Here we provide a case-study on how to use in-situ observation of IOPs to devise an improved algorithm for retrieval of IOPs. We then apply this algorithm to observation with Sentinel-3A OLCI (Ocean and Land Colour Instrument, corrected with our improved AC scheme), and use in-situ data to show that the algorithm performs better than the standard OLCI IOP product. We use the satellite derived products to study the spatial and seasonal distributions of IOPs and concentrations of optically active constituents in these three lakes, including chlorophyll-a (Chla) and suspended particulate matter (SPM), using all cloud-free OLCI images (115 scenes) over the lakes in the LYHR basin in 2017. Our study provides a strategy for using local and remote observations to obtain important water quality parameters necessary to manage resources such as reservoirs, lakes and coastal waters

An ensemble neural network atmospheric correction for Sentinel-3 OLCI over coastal waters providing inherent model uncertainty estimation and sensor noise propagation

Accurate atmospheric correction (AC) is a prerequisite for quantitative ocean colour remote sensing and remains a challenge in particular over coastal waters. Commonly AC algorithms are validated by establishing a mean retrieval error from match-up analysis, which compares the satellite-derived surface reflectance with concurrent ground radiometric observations. Pixel-based reflectance uncertainties however, are rarely provided by AC algorithms and those for the operational Ocean and Land Colour Instrument (OLCI) marine reflectance product are not yet recommended for use. AC retrieval errors and uncertainties directly determine the quality with which ocean colour products can be estimated from the marine surface reflectance. Increasingly there is also the need for reflectance uncertainty products to be used as data assimilation inputs into biogeochemical models. This paper describes the development of a new coastal AC algorithm for Sentinel-3 OLCI that provides pixel-based estimation of the inherent model inversion uncertainty and sensor noise propagation. The algorithm is a full-spectral model-based inversion of radiative transfer (RT) simulations in a coupled atmosphere–ocean system using an ensemble of artificial neural networks (ANN) that were initialized differently during the training process, but composed of the same network architecture. The algorithm has been validated against in-situ radiometric observations across a wide range of optical water types, and has been compared with the latest EUMETSAT operational Level 2 processor IPF-OL-2 v7.01. In this analysis we found that the ensemble ANN showed improved performance over the operational Level 2 processor with a band-averaged (412–708 nm) mean absolute percentage error (MAPE) of 16% compared to 37% and a four-times lower band-averaged bias of -0.00045 sr-1. In the ensemble inversion process we account for three uncertainty components: (1) the total model variance that describes the variance of the data from the different ANNs, (2) the prediction variance of the mean, which is based on calculations of the RT simulations and (3) the instrument noise variance of the mean by propagating the OLCI spectral signal-to-noise ratios (SNR). To study algorithm performance and to quantify the contribution of the different uncertainty components to the total uncertainty, we applied the algorithm to an optically complex full resolution (FR) test scene covering coastal waters of the Great Barrier Reef, Australia. The uncertainties associated with the instrument noise variance were found to be two orders of magnitude lower than the uncertainty components of the prediction and total model variances. The overall largest uncertainty component in our uncertainty framework is attributed to the total model inversion error from averaging the responses of the slightly different adapted networks in the ensemble. The algorithm is made publicly available as a Python/C plugin for the Sentinel Application Platform (SNAP)

Towards high fidelity mapping of global inland water quality using earth observation data

This body of work aims to contribute advancements towards developing globally applicable water quality retrieval models using Earth Observation data for freshwater systems. Eutrophication and increasing prevalence of potentially toxic algal blooms among global inland water bodies have become a major ecological concersn and require direct attention. There is now a growing necessity to develop pragmatic approaches that allow timely and effective extrapolation of local processes, to spatially resolved global products. This study provides one of the first assessments of the state-ofthe-art for trophic status (chlorophyll-a) retrievals for small water bodies using Sentinel-3 Ocean and Land Color Imager (OLCI). Multiple fieldwork campaigns were undertaken for the collection of common aquatic biogeophysical and bio-optical parameters that were used to validate current atmospheric correction and chlorophyll-a retrieval algorithms. The study highlighted the difficulties of obtaining robust retrieval estimates from a coarse spatial resolution sensor from highly variable eutrophic water bodies. Atmospheric correction remains a difficult challenge to operational freshwater monitoring, however, the study further validated previous work confirming applicability of simple, empirically derived retrieval algorithms using top-of-atmosphere data. The apparent scarcity of paired in-situ optical and biogeophysical data for productive inland waters also hinders our capability to develop and validate robust retrieval algorithms. Radiative transfer modeling was used to fill this gap through the development of a novel synthetic dataset of top-of-atmosphere and bottom-of-atmosphere reflectances, which attempts to encompass the immense natural optical variability present in inland waters. Novel aspects of the synthetic dataset include: 1) physics-based, two-layered, size and type specific phytoplankton IOPs for mixed eukaryotic/cyanobacteria 6 assemblages, 2) calculations of mixed assemblage chl-a fluorescence, 3) modeled phycocyanin concentration derived from assemblage based phycocyanin absorption, 4) and paired sensor-specific TOA reflectances which include optically extreme cases and contribution of green vegetation adjacency. The synthetic bottom-of-atmosphere reflectance spectra were compiled into 13 distinct optical water types similar to those discovered using in-situ data. Inspection showed similar relationships and ranges of concentrations and inherent optical properties of natural waters. This dataset was used to calculate typical surviving water-leaving signal at top-of-atmosphere, as well as first order calculations of the signal-to-noise-ratio (SNR) for the various optical water types, a first for productive inland waters, as well as conduct a sensitivity analysis of cyanobacteria detection from top-of-atmosphere. Finally, the synthetic dataset was used to train and test four state-of-the-art machine learning architectures for multi-parameter retrieval and cross-sensor capability. Initial results provide reliable estimates of water quality parameters and inherent optical properties over a highly dynamic range of water types, at various spectral and spatial sensor resolutions. It is hoped the results of this work incrementally improves inland water Earth observation on multiple aspects of the forward and inverse modelling process, and provides an improvement in our capabilities for routine, global monitoring of inland water quality

NASA's surface biology and geology designated observable: A perspective on surface imaging algorithms

The 2017–2027 National Academies' Decadal Survey, Thriving on Our Changing Planet, recommended Surface Biology and Geology (SBG) as a “Designated Targeted Observable” (DO). The SBG DO is based on the need for capabilities to acquire global, high spatial resolution, visible to shortwave infrared (VSWIR; 380–2500 nm; ~30 m pixel resolution) hyperspectral (imaging spectroscopy) and multispectral midwave and thermal infrared (MWIR: 3–5 μm; TIR: 8–12 μm; ~60 m pixel resolution) measurements with sub-monthly temporal revisits over terrestrial, freshwater, and coastal marine habitats. To address the various mission design needs, an SBG Algorithms Working Group of multidisciplinary researchers has been formed to review and evaluate the algorithms applicable to the SBG DO across a wide range of Earth science disciplines, including terrestrial and aquatic ecology, atmospheric science, geology, and hydrology. Here, we summarize current state-of-the-practice VSWIR and TIR algorithms that use airborne or orbital spectral imaging observations to address the SBG DO priorities identified by the Decadal Survey: (i) terrestrial vegetation physiology, functional traits, and health; (ii) inland and coastal aquatic ecosystems physiology, functional traits, and health; (iii) snow and ice accumulation, melting, and albedo; (iv) active surface composition (eruptions, landslides, evolving landscapes, hazard risks); (v) effects of changing land use on surface energy, water, momentum, and carbon fluxes; and (vi) managing agriculture, natural habitats, water use/quality, and urban development. We review existing algorithms in the following categories: snow/ice, aquatic environments, geology, and terrestrial vegetation, and summarize the community-state-of-practice in each category. This effort synthesizes the findings of more than 130 scientists

Optical remote sensing of lakes: an overview on Lake Maggiore

Optical satellite remote sensing represents an opportunity to integrate traditional methods for assessing water quality of lakes: strengths of remote sensing methods are the good spatial and temporal coverage, the possibility to monitor many lakes simultaneously and the reduced costs. In this work we present an overview of optical remote sensing techniques applied to lake water monitoring. Then, examples of applications focused on lake Maggiore, the second largest lake in Italy are discussed by presenting the temporal trend of chlorophyll-a (chl-a), suspended particulate matter (SPM), coloured dissolved organic matter (CDOM) and the z90 signal depth (the latter indicating the water depth from which 90% of the reflected light comes from) as estimated from the images acquired by the Medium Resolution Imaging Spectrometer (MERIS) in the pelagic area of the lake from 2003 to 2011. Concerning the chl-a trend, the results are in agreement with the concentration values measured during field surveys, confirming the good status of lake Maggiore, although occasional events of water deterioration were observed (e.g., an average increase of chl-a concentration, with a decrease of transparency, as a consequence of an anomalous phytoplankton occurred in summer 2011). A series of MERIS-derived maps (summer period 2011) of the z90 signal are also analysed in order to show the spatial variability of lake waters, which on average were clearer in the central pelagic zones. We expect that the recently launched (e.g., Landsat-8) and the future satellite missions (e.g., Sentinel-3) carrying sensors with improved spectral and spatial resolution are going to lead to a larger use of remote sensing for the assessment and monitoring of water quality parameters, by also allowing further applications (e.g., classification of phytoplankton functional types) to be developed

Improving satellite-based monitoring of the Arctic polar regions: identification of research and capacity gaps

We present a comprehensive review of the current status of remotely sensed and in situ sea ice, ocean, and land parameters acquired over the Arctic and Antarctic and identify current data gaps through comparison with the portfolio of products provided by Copernicus services. While we include several land parameters, the focus of our review is on the marine sector. The analysis is facilitated by the outputs of the KEPLER H2020 project. This project developed a road map for Copernicus to deliver an improved European capacity for monitoring and forecasting of the Polar Regions, including recommendations and lessons learnt, and the role citizen science can play in supporting Copernicus’ capabilities and giving users ownership in the system. In addition to summarising this information we also provide an assessment of future satellite missions (in particular the Copernicus Sentinel Expansion Missions), in terms of the potential enhancements they can provide for environmental monitoring and integration/assimilation into modelling/forecast products. We identify possible synergies between parameters obtained from different satellite missions to increase the information content and the robustness of specific data products considering the end-users requirements, in particular maritime safety. We analyse the potential of new variables and new techniques relevant for assimilation into simulations and forecasts of environmental conditions and changes in the Polar Regions at various spatial and temporal scales. This work concludes with several specific recommendations to the EU for improving the satellite-based monitoring of the Polar Regions

Improving satellite-based monitoring of the polar regions: Identification of research and capacity gaps

We present a comprehensive review of the current status of remotely sensed and in situ sea ice, ocean, and land parameters acquired over the Arctic and Antarctic and identify current data gaps through comparison with the portfolio of products provided by Copernicus services. While we include several land parameters, the focus of our review is on the marine sector. The analysis is facilitated by the outputs of the KEPLER H2020 project. This project developed a road map for Copernicus to deliver an improved European capacity for monitoring and forecasting of the Polar Regions, including recommendations and lessons learnt, and the role citizen science can play in supporting Copernicus’ capabilities and giving users ownership in the system. In addition to summarising this information we also provide an assessment of future satellite missions (in particular the Copernicus Sentinel Expansion Missions), in terms of the potential enhancements they can provide for environmental monitoring and integration/assimilation into modelling/forecast products. We identify possible synergies between parameters obtained from different satellite missions to increase the information content and the robustness of specific data products considering the end-users requirements, in particular maritime safety. We analyse the potential of new variables and new techniques relevant for assimilation into simulations and forecasts of environmental conditions and changes in the Polar Regions at various spatial and temporal scales. This work concludes with several specific recommendations to the EU for improving the satellite-based monitoring of the Polar Regions

Inland Water Atmospheric Correction Based on Turbidity Classification Using OLCI and SLSTR Synergistic Observations

Atmospheric correction is an essential prerequisite for obtaining accurate inland water color information. An inland water atmospheric correction algorithm, ACbTC (Atmospheric Correction based on Turbidity Classification), was proposed in this study by using OLCI (Ocean and Land Color Instrument) and SLSTR (Sea and Land Surface Temperature Radiometer) synergistic observations for the first time. This method includes two main steps: (1) water turbidity classification by the GRA index (GRAdient of the spectrum index); and (2) atmospheric correction by synergistic use of OLCI and SLSTR images. The algorithm was validated with 72 in situ sampling sites in Lake Erhai, Lake Hongze, and Lake Taihu, and compared with other atmospheric correction methods, i.e., C2RCC (Case 2 Regional Coast Colour processor), MUMM (Management Unit of the North Seas Mathematical Models), FLAASH (Fast Line-of-sight Atmospheric Analysis of Hypercubes), POLYMER (POLYnomial based algorithm applied to MERIS), and BPAC (Bright Pixel Atmospheric Correction). The results show that (1) the GRA index performed better than the proposed turbidity classification indices, i.e., the Diff (spectral difference index) and the Tind (turbid index), in inland lakes by using the reflectance peak at 1020 nm in clean water; (2) the synergistic use of OLCI and SLSTR performed feasibly for atmospheric correction, and the ACbTC algorithm achieved full-band average values of the mean absolute percentage error (MAPE) = 29.55%, mean relative percentage error (MRPE) = 13.98%, and the root mean square of error (RMSE) = 0.0039 sr−1, which were more reliable than C2RCC, MUMM, FLAASH, POLYMER, and BPAC; and (3) the synergistic use of the 17th band (865 nm) on OLCI and the 5th band (1613 nm) on SLSTR are suitable for clean inland lakes, while both the 5th band (1613 nm) and 6th band (2250 nm) on SLSTR are advisable for the turbidity

The data concept behind the data: From metadata models and labelling schemes towards a generic spectral library

Spectral libraries play a major role in imaging spectroscopy. They are commonly used to store end-member and spectrally pure material spectra, which are primarily used for mapping or unmixing purposes. However, the development of spectral libraries is time consuming and usually sensor and site dependent. Spectral libraries are therefore often developed, used and tailored only for a specific case study and only for one sensor. Multi-sensor and multi-site use of spectral libraries is difficult and requires technical effort for adaptation, transformation, and data harmonization steps. Especially the huge amount of urban material specifications and its spectral variations hamper the setup of a complete spectral library consisting of all available urban material spectra. By a combined use of different urban spectral libraries, besides the improvement of spectral inter- and intra-class variability, missing material spectra could be considered with respect to a multi-sensor/ -site use. Publicly available spectral libraries mostly lack the metadata information that is essential for describing spectra acquisition and sampling background, and can serve to some extent as a measure of quality and reliability of the spectra and the entire library itself. In the GenLib project, a concept for a generic, multi-site and multi-sensor usable spectral library for image spectra on the urban focus was developed. This presentation will introduce a 1) unified, easy-to-understand hierarchical labeling scheme combined with 2) a comprehensive metadata concept that is 3) implemented in the SPECCHIO spectral information system to promote the setup and usability of a generic urban spectral library (GUSL). The labelling scheme was developed to ensure the translation of individual spectral libraries with their own labelling schemes and their usually varying level of details into the GUSL framework. It is based on a modified version of the EAGLE classification concept by combining land use, land cover, land characteristics and spectral characteristics. The metadata concept consists of 59 mandatory and optional attributes that are intended to specify the spatial context, spectral library information, references, accessibility, calibration, preprocessing steps, and spectra specific information describing library spectra implemented in the GUSL. It was developed on the basis of existing metadata concepts and was subject of an expert survey. The metadata concept and the labelling scheme are implemented in the spectral information system SPECCHIO, which is used for sharing and holding GUSL spectra. It allows easy implementation of spectra as well as their specification with the proposed metadata information to extend the GUSL. Therefore, the proposed data model represents a first fundamental step towards a generic usable and continuously expandable spectral library for urban areas. The metadata concept and the labelling scheme also build the basis for the necessary adaptation and transformation steps of the GUSL in order to use it entirely or in excerpts for further multi-site and multi-sensor applications