Strengthening Cluster Building in Developing Country alongside the Triple Helix: Challenge for Indonesian Clusters - A Case Study of the Java Region

This paper is a component of my conceptual foundation paper due to PhD field work in Indonesia to understand the possibility and the chance for developing country such as Indonesia to strengthen cluster building alongside The Triple Helix model within the region of Java. This paper is a conceptual paper based on case study in Indonesia related to the Triple Helix and cluster approach for chosen Industrial Clusters in Java. In this paper, the focus will be on six selected industrial clusters across the Java region. They are Gresik Industrial District in East Java, Tugu Wijaya Semarang in Central Java, Sentul Bogor in West Java, Jababeka in Bekasi, Kujang Industrial District, and Kawasan Berikat Nusantara in Jakarta. In conjunction with the fact in Indonesian industrial condition, Indonesian government initiated the setting up of industrial district which later known as 2 industrial cluster to make existence easier for both domestic and international investors by providing all necessary infrastructure, facilities and housing in one safe location - at a reasonable cost - thus providing a secure base for industry and manufacturing. Regarding clustering approach, Indonesia has a very long tradition of SMEs (Small and Medium Sized Enterprises) cluster around similar activities. In 2002, the cluster comprised approximately 3700 firms mostly SMEs employing 58.000 permanent workers (Loebis and Schmitz, 2005). They are usually craft industries and export oriented driven. About 70% of the cluster production is exported while the rest is sold on the domestic markets. However, little is known about the critical success factors that determine economic development of cities and regions and empirical studies that draw lessons for policy are scarce (Tichy, 1998), specifically for implementing cluster approach in industry/manufacturing sector in Indonesia. Moreover, there are good reasons to doubt to what extent a purely sectoral view is adequate to analyse region economic growth and to design policies. There are many indications that urban economic growth increasingly seems to emerge from fruitful cooperation between economic actors, who form innovative networks. It is in these geographically concentrated network configurations, or ‘cluster’ that value-added and employment growth in urban regions is realised. This demands a new policy approach in urban economic development, specifically for Indonesian study. Accordingly, it is motivating to investigate the process of cluster building in industrial district in Java region as the important region due to economic, social, and political condition. Thus, details can be read in the following section within this paper.Cluster, Triple Helix, SMEs,

Parsing Expression Grammars Made Practical

Parsing Expression Grammars (PEGs) define languages by specifying recursive-descent parser that recognises them. The PEG formalism exhibits desirable properties, such as closure under composition, built-in disambiguation, unification of syntactic and lexical concerns, and closely matching programmer intuition. Unfortunately, state of the art PEG parsers struggle with left-recursive grammar rules, which are not supported by the original definition of the formalism and can lead to infinite recursion under naive implementations. Likewise, support for associativity and explicit precedence is spotty. To remedy these issues, we introduce Autumn, a general purpose PEG library that supports left-recursion, left and right associativity and precedence rules, and does so efficiently. Furthermore, we identify infix and postfix operators as a major source of inefficiency in left-recursive PEG parsers and show how to tackle this problem. We also explore the extensibility of the PEG paradigm by showing how one can easily introduce new parsing operators and how our parser accommodates custom memoization and error handling strategies. We compare our parser to both state of the art and battle-tested PEG and CFG parsers, such as Rats!, Parboiled and ANTLR.Comment: "Proceedings of the International Conference on Software Language Engineering (SLE 2015)" - 167-172 (ISBN : 978-1-4503-3686-4

Design of scalable Java message-passing communications over InfiniBand

This is a post-peer-review, pre-copyedit version of an article published in The Journal of Supercomputing. The final authenticated version is available online at: https://doi.org/10.1007/s11227-011-0654-9[Abstract] This paper presents ibvdev a scalable and efficient low-level Java message-passing communication device over InfiniBand. The continuous increase in the number of cores per processor underscores the need for efficient communication support for parallel solutions. Moreover, current system deployments are aggregating a significant number of cores through advanced network technologies, such as InfiniBand, increasing the complexity of communication protocols, especially when dealing with hybrid shared/distributed memory architectures such as clusters. Here, Java represents an attractive choice for the development of communication middleware for these systems, as it provides built-in networking and multithreading support. As the gap between Java and compiled languages performance has been narrowing for the last years, Java is an emerging option for High Performance Computing (HPC). The developed communication middleware ibvdev increases Java applications performance on clusters of multicore processors interconnected via InfiniBand through: (1) providing Java with direct access to InfiniBand using InfiniBand Verbs API, somewhat restricted so far to MPI libraries; (2) implementing an efficient and scalable communication protocol which obtains start-up latencies and bandwidths similar to MPI performance results; and (3) allowing its integration in any Java parallel and distributed application. In fact, it has been successfully integrated in the Java messaging library MPJ Express. The experimental evaluation of this middleware on an InfiniBand cluster of multicore processors has shown significant point-to-point performance benefits, up to 85% start-up latency reduction and twice the bandwidth compared to previous Java middleware on InfiniBand. Additionally, the impact of ibvdev on message-passing collective operations is significant, achieving up to one order of magnitude performance increases compared to previous Java solutions, especially when combined with multithreading. Finally, the efficiency of this middleware, which is even competitive with MPI in terms of performance, increments the scalability of communications intensive Java HPC applications.Ministerio de Ciencia e Innovación; TIN2010-1673

Java-ML: a machine learning library

Java-ML is a collection of machine learning and data mining algorithms, which aims to be a readily usable and easily extensible API for both software developers and research scientists. The interfaces for each type of algorithm are kept simple and algorithms strictly follow their respective interface. Comparing different classifiers or clustering algorithms is therefore straightforward, and implementing new algorithms is also easy. The implementations of the algorithms are clearly written, properly documented and can thus be used as a reference. The library is written in Java and is available from http://java-ml.sourceforge.net/ under the GNU GPL license

Probabilistic Graphical Models on Multi-Core CPUs using Java 8

In this paper, we discuss software design issues related to the development of parallel computational intelligence algorithms on multi-core CPUs, using the new Java 8 functional programming features. In particular, we focus on probabilistic graphical models (PGMs) and present the parallelisation of a collection of algorithms that deal with inference and learning of PGMs from data. Namely, maximum likelihood estimation, importance sampling, and greedy search for solving combinatorial optimisation problems. Through these concrete examples, we tackle the problem of defining efficient data structures for PGMs and parallel processing of same-size batches of data sets using Java 8 features. We also provide straightforward techniques to code parallel algorithms that seamlessly exploit multi-core processors. The experimental analysis, carried out using our open source AMIDST (Analysis of MassIve Data STreams) Java toolbox, shows the merits of the proposed solutions.Comment: Pre-print version of the paper presented in the special issue on Computational Intelligence Software at IEEE Computational Intelligence Magazine journa

Teaching Parallel Programming Using Java

This paper presents an overview of the "Applied Parallel Computing" course taught to final year Software Engineering undergraduate students in Spring 2014 at NUST, Pakistan. The main objective of the course was to introduce practical parallel programming tools and techniques for shared and distributed memory concurrent systems. A unique aspect of the course was that Java was used as the principle programming language. The course was divided into three sections. The first section covered parallel programming techniques for shared memory systems that include multicore and Symmetric Multi-Processor (SMP) systems. In this section, Java threads was taught as a viable programming API for such systems. The second section was dedicated to parallel programming tools meant for distributed memory systems including clusters and network of computers. We used MPJ Express-a Java MPI library-for conducting programming assignments and lab work for this section. The third and the final section covered advanced topics including the MapReduce programming model using Hadoop and the General Purpose Computing on Graphics Processing Units (GPGPU).Comment: 8 Pages, 6 figures, MPJ Express, MPI Java, Teaching Parallel Programmin

Integrating R and Hadoop for Big Data Analysis

Analyzing and working with big data could be very diffi cult using classical means like relational database management systems or desktop software packages for statistics and visualization. Instead, big data requires large clusters with hundreds or even thousands of computing nodes. Offi cial statistics is increasingly considering big data for deriving new statistics because big data sources could produce more relevant and timely statistics than traditional sources. One of the software tools successfully and wide spread used for storage and processing of big data sets on clusters of commodity hardware is Hadoop. Hadoop framework contains libraries, a distributed fi le-system (HDFS), a resource-management platform and implements a version of the MapReduce programming model for large scale data processing. In this paper we investigate the possibilities of integrating Hadoop with R which is a popular software used for statistical computing and data visualization. We present three ways of integrating them: R with Streaming, Rhipe and RHadoop and we emphasize the advantages and disadvantages of each solution.Comment: Romanian Statistical Review no. 2 / 201