Boosting Neural Image Compression for Machines Using Latent Space Masking

Today, many image coding scenarios do not have a human as final intended user, but rather a machine fulfilling computer vision tasks on the decoded image. Thereby, the primary goal is not to keep visual quality but maintain the task accuracy of the machine for a given bitrate. Due to the tremendous progress of deep neural networks setting benchmarking results, mostly neural networks are employed to solve the analysis tasks at the decoder side. Moreover, neural networks have also found their way into the field of image compression recently. These two developments allow for an end-to-end training of the neural compression network for an analysis network as information sink. Therefore, we first roll out such a training with a task-specific loss to enhance the coding performance of neural compression networks. Compared to the standard VVC, 41.4% of bitrate are saved by this method for Mask R-CNN as analysis network on the uncompressed Cityscapes dataset. As a main contribution, we propose LSMnet, a network that runs in parallel to the encoder network and masks out elements of the latent space that are presumably not required for the analysis network. By this approach, additional 27.3% of bitrate are saved compared to the basic neural compression network optimized with the task loss. In addition, we are the first to utilize a feature-based distortion in the training loss within the context of machine-to-machine communication, which allows for a training without annotated data. We provide extensive analyses on the Cityscapes dataset including cross-evaluation with different analysis networks and present exemplary visual results. Inference code and pre-trained models are published at https://github.com/FAU-LMS/NCN_for_M2M.Comment: 12 pages, 9 figures, 3 tables; This work has been accepted for IEEE T-CSVT special issue "Learned Visual Data Compression for both Human and Machine". Copyright may be transferred without notice, after which this version may no longer be accessibl

Towards an in-plane methodology to track breast lesions using mammograms and patient-specific finite-element simulations

In breast cancer screening or diagnosis, it is usual to combine different images in order to locate a lesion as accurately as possible. These images are generated using a single or several imaging techniques. As x-ray-based mammography is widely used, a breast lesion is located in the same plane of the image (mammogram), but tracking it across mammograms corresponding to different views is a challenging task for medical physicians. Accordingly, simulation tools and methodologies that use patient-specific numerical models can facilitate the task of fusing information from different images. Additionally, these tools need to be as straightforward as possible to facilitate their translation to the clinical area. This paper presents a patient-specific, finite-element-based and semi-automated simulation methodology to track breast lesions across mammograms. A realistic three-dimensional computer model of a patient''s breast was generated from magnetic resonance imaging to simulate mammographic compressions in cranio-caudal (CC, head-to-toe) and medio-lateral oblique (MLO, shoulder-to-opposite hip) directions. For each compression being simulated, a virtual mammogram was obtained and posteriorly superimposed to the corresponding real mammogram, by sharing the nipple as a common feature. Two-dimensional rigid-body transformations were applied, and the error distance measured between the centroids of the tumors previously located on each image was 3.84 mm and 2.41 mm for CC and MLO compression, respectively. Considering that the scope of this work is to conceive a methodology translatable to clinical practice, the results indicate that it could be helpful in supporting the tracking of breast lesions

Influence of study design on digital pathology image quality evaluation : the need to define a clinical task

Despite the current rapid advance in technologies for whole slide imaging, there is still no scientific consensus on the recommended methodology for image quality assessment of digital pathology slides. For medical images in general, it has been recommended to assess image quality in terms of doctors’ success rates in performing a specific clinical task while using the images (clinical image quality, cIQ). However, digital pathology is a new modality, and already identifying the appropriate task is difficult. In an alternative common approach, humans are asked to do a simpler task such as rating overall image quality (perceived image quality, pIQ), but that involves the risk of nonclinically relevant findings due to an unknown relationship between the pIQ and cIQ. In this study, we explored three different experimental protocols: (1) conducting a clinical task (detecting inclusion bodies), (2) rating image similarity and preference, and (3) rating the overall image quality. Additionally, within protocol 1, overall quality ratings were also collected (task-aware pIQ). The experiments were done by diagnostic veterinary pathologists in the context of evaluating the quality of hematoxylin and eosin-stained digital pathology slides of animal tissue samples under several common image alterations: additive noise, blurring, change in gamma, change in color saturation, and JPG compression. While the size of our experiments was small and prevents drawing strong conclusions, the results suggest the need to define a clinical task. Importantly, the pIQ data collected under protocols 2 and 3 did not always rank the image alterations the same as their cIQ from protocol 1, warning against using conventional pIQ to predict cIQ. At the same time, there was a correlation between the cIQ and task-aware pIQ ratings from protocol 1, suggesting that the clinical experiment context (set by specifying the clinical task) may affect human visual attention and bring focus to their criteria of image quality. Further research is needed to assess whether and for which purposes (e.g., preclinical testing) task-aware pIQ ratings could substitute cIQ for a given clinical task