Progressive Refinement Imaging

This paper presents a novel technique for progressive online integration of uncalibrated image sequences with substantial geometric and/or photometric discrepancies into a single, geometrically and photometrically consistent image. Our approach can handle large sets of images, acquired from a nearly planar or infinitely distant scene at different resolutions in object domain and under variable local or global illumination conditions. It allows for efficient user guidance as its progressive nature provides a valid and consistent reconstruction at any moment during the online refinement process. // Our approach avoids global optimization techniques, as commonly used in the field of image refinement, and progressively incorporates new imagery into a dynamically extendable and memory‐efficient Laplacian pyramid. Our image registration process includes a coarse homography and a local refinement stage using optical flow. Photometric consistency is achieved by retaining the photometric intensities given in a reference image, while it is being refined. Globally blurred imagery and local geometric inconsistencies due to, e.g. motion are detected and removed prior to image fusion. // We demonstrate the quality and robustness of our approach using several image and video sequences, including handheld acquisition with mobile phones and zooming sequences with consumer cameras

Computerized Analysis of Magnetic Resonance Images to Study Cerebral Anatomy in Developing Neonates

The study of cerebral anatomy in developing neonates is of great importance for the understanding of brain development during the early period of life. This dissertation therefore focuses on three challenges in the modelling of cerebral anatomy in neonates during brain development. The methods that have been developed all use Magnetic Resonance Images (MRI) as source data. To facilitate study of vascular development in the neonatal period, a set of image analysis algorithms are developed to automatically extract and model cerebral vessel trees. The whole process consists of cerebral vessel tracking from automatically placed seed points, vessel tree generation, and vasculature registration and matching. These algorithms have been tested on clinical Time-of- Flight (TOF) MR angiographic datasets. To facilitate study of the neonatal cortex a complete cerebral cortex segmentation and reconstruction pipeline has been developed. Segmentation of the neonatal cortex is not effectively done by existing algorithms designed for the adult brain because the contrast between grey and white matter is reversed. This causes pixels containing tissue mixtures to be incorrectly labelled by conventional methods. The neonatal cortical segmentation method that has been developed is based on a novel expectation-maximization (EM) method with explicit correction for mislabelled partial volume voxels. Based on the resulting cortical segmentation, an implicit surface evolution technique is adopted for the reconstruction of the cortex in neonates. The performance of the method is investigated by performing a detailed landmark study. To facilitate study of cortical development, a cortical surface registration algorithm for aligning the cortical surface is developed. The method first inflates extracted cortical surfaces and then performs a non-rigid surface registration using free-form deformations (FFDs) to remove residual alignment. Validation experiments using data labelled by an expert observer demonstrate that the method can capture local changes and follow the growth of specific sulcus

Anatomical atlas-guided diffuse optical tomography of brain activation

We describe a neuroimaging protocol that utilizes an anatomical atlas of the human head to guide diffuse optical tomography of human brain activation. The protocol is demonstrated by imaging the hemodynamic response to median-nerve stimulation in three healthy subjects, and comparing the images obtained using a head atlas with the images obtained using the subject-specific head anatomy. The results indicate that using the head atlas anatomy it is possible to reconstruct the location of the brain activation to the expected gyrus of the brain, in agreement with the results obtained with the subject-specific head anatomy. The benefits of this novel method derive from eliminating the need for subject-specific head anatomy and thus obviating the need for a subject-specific MRI to improve the anatomical interpretation of diffuse optical tomography images of brain activation.National Institutes of Health (U.S.) (U54-EB-005149)National Institutes of Health (U.S.) (P41-RR14075)National Institutes of Health (U.S.) (P41-RR13218

The Illumination and Growth of CRL 2688: An Analysis of New & Archival HST Observations

We present four-color images of CRL 2688 obtained in 2009 using the Wide-Field Camera 3 on HST. The F606W image is compared with archival images in very similar filters to monitor the proper motions of nebular structure. We find that the bright N-S lobes have expanded uniformly by 2.5% and that the ensemble of rings has translated radially by 0.07 in 6.65 y. The rings were ejected every 100y for ~4 millennia until the lobes formed 250y ago. Starlight scattered from the edges of the dark E-W dust lane is coincident with extant H2 images and leading tips of eight pairs of CO outflows. We interpret this as evidence that fingers lie within geometrically opposite cones of opening angles {\approx} 30{\circ} like those in CRL618. By combining our results of the rings with 12CO absorption from the extended AGB wind we ascertain that the rings were ejected at ~18 km s-1 with very little variation and that the distance to CRL2688, v_{exp}$/${\dot\theta}_exp$, is 300 - 350 pc. Our 2009 imaging program included filters that span 0.6 to 1.6{\mu}m. We constructed a two-dimensional dust scattering model of stellar radiation through CRL2688 that successfully reproduces the details of the nebular geometry, its integrated spectral energy distribution, and nearly all of its color variations. The model implies that the optical opacity of the lobes >~ 1, the dust particle density in the rings decreases as radius^{-3} and that the mass and momentum of the AGB winds and their rings have increased over time.Comment: (51 pages, 6 figures; accepted by ApJ

Image-based 3-D reconstruction of constrained environments

Nuclear power plays a important role to the United Kingdom electricity generation infrastructure, providing a reliable baseload of low carbon electricity. The Advanced Gas-cooled Reactor (AGR) design makes up approximately 50% of the existing fleet, however, many of the operating reactors have exceeding their original design lifetimes.To ensure safe reactor operation, engineers perform periodic in-core visual inspections of reactor components to monitor the structural health of the core as it ages. However, current inspection mechanisms deployed provide limited structural information about the fuel channel or defects.;This thesis investigates the suitability of image-based 3-D reconstruction techniques to acquire 3-D structural geometry to enable improved diagnostic and prognostic abilities for inspection engineers. The application of image-based 3-D reconstruction to in-core inspection footage highlights significant challenges, most predominantly that the image saliency proves insuffcient for general reconstruction frameworks. The contribution of the thesis is threefold. Firstly, a novel semi-dense matching scheme which exploits sparse and dense image correspondence in combination with a novel intra-image region strength approach to improve the stability of the correspondence between images.;This results in a percentage increase of 138.53% of correct feature matches over similar state-of-the-art image matching paradigms. Secondly, a bespoke incremental Structure-from-Motion (SfM) framework called the Constrained Homogeneous SfM (CH-SfM) which is able to derive structure from deficient feature spaces and constrained environments. Thirdly, the application of the CH-SfM framework to remote visual inspection footage gathered within AGR fuel channels, outperforming other state-of-the-art reconstruction approaches and extracting representative 3-D structural geometry of orientational scans and fully circumferential reconstructions.;This is demonstrated on in-core and laboratory footage, achieving an approximate 3-D point density of 2.785 - 23.8025NX/cm² for real in-core inspection footage and high quality laboratory footage respectively. The demonstrated novelties have applicability to other constrained or feature-poor environments, with future work looking to producing fully dense, photo-realistic 3-D reconstructions.Nuclear power plays a important role to the United Kingdom electricity generation infrastructure, providing a reliable baseload of low carbon electricity. The Advanced Gas-cooled Reactor (AGR) design makes up approximately 50% of the existing fleet, however, many of the operating reactors have exceeding their original design lifetimes.To ensure safe reactor operation, engineers perform periodic in-core visual inspections of reactor components to monitor the structural health of the core as it ages. However, current inspection mechanisms deployed provide limited structural information about the fuel channel or defects.;This thesis investigates the suitability of image-based 3-D reconstruction techniques to acquire 3-D structural geometry to enable improved diagnostic and prognostic abilities for inspection engineers. The application of image-based 3-D reconstruction to in-core inspection footage highlights significant challenges, most predominantly that the image saliency proves insuffcient for general reconstruction frameworks. The contribution of the thesis is threefold. Firstly, a novel semi-dense matching scheme which exploits sparse and dense image correspondence in combination with a novel intra-image region strength approach to improve the stability of the correspondence between images.;This results in a percentage increase of 138.53% of correct feature matches over similar state-of-the-art image matching paradigms. Secondly, a bespoke incremental Structure-from-Motion (SfM) framework called the Constrained Homogeneous SfM (CH-SfM) which is able to derive structure from deficient feature spaces and constrained environments. Thirdly, the application of the CH-SfM framework to remote visual inspection footage gathered within AGR fuel channels, outperforming other state-of-the-art reconstruction approaches and extracting representative 3-D structural geometry of orientational scans and fully circumferential reconstructions.;This is demonstrated on in-core and laboratory footage, achieving an approximate 3-D point density of 2.785 - 23.8025NX/cm² for real in-core inspection footage and high quality laboratory footage respectively. The demonstrated novelties have applicability to other constrained or feature-poor environments, with future work looking to producing fully dense, photo-realistic 3-D reconstructions