An Integrative Remote Sensing Application of Stacked Autoencoder for Atmospheric Correction and Cyanobacteria Estimation Using Hyperspectral Imagery

Hyperspectral image sensing can be used to effectively detect the distribution of harmful cyanobacteria. To accomplish this, physical- and/or model-based simulations have been conducted to perform an atmospheric correction (AC) and an estimation of pigments, including phycocyanin (PC) and chlorophyll-a (Chl-a), in cyanobacteria. However, such simulations were undesirable in certain cases, due to the difficulty of representing dynamically changing aerosol and water vapor in the atmosphere and the optical complexity of inland water. Thus, this study was focused on the development of a deep neural network model for AC and cyanobacteria estimation, without considering the physical formulation. The stacked autoencoder (SAE) network was adopted for the feature extraction and dimensionality reduction of hyperspectral imagery. The artificial neural network (ANN) and support vector regression (SVR) were sequentially applied to achieve AC and estimate cyanobacteria concentrations (i.e., SAE-ANN and SAE-SVR). Further, the ANN and SVR models without SAE were compared with SAE-ANN and SAE-SVR models for the performance evaluations. In terms of AC performance, both SAE-ANN and SAE-SVR displayed reasonable accuracy with the Nash???Sutcliffe efficiency (NSE) > 0.7. For PC and Chl-a estimation, the SAE-ANN model showed the best performance, by yielding NSE values > 0.79 and > 0.77, respectively. SAE, with fine tuning operators, improved the accuracy of the original ANN and SVR estimations, in terms of both AC and cyanobacteria estimation. This is primarily attributed to the high-level feature extraction of SAE, which can represent the spatial features of cyanobacteria. Therefore, this study demonstrated that the deep neural network has a strong potential to realize an integrative remote sensing application

Classification of Arrhythmia by Using Deep Learning with 2-D ECG Spectral Image Representation

The electrocardiogram (ECG) is one of the most extensively employed signals used in the diagnosis and prediction of cardiovascular diseases (CVDs). The ECG signals can capture the heart's rhythmic irregularities, commonly known as arrhythmias. A careful study of ECG signals is crucial for precise diagnoses of patients' acute and chronic heart conditions. In this study, we propose a two-dimensional (2-D) convolutional neural network (CNN) model for the classification of ECG signals into eight classes; namely, normal beat, premature ventricular contraction beat, paced beat, right bundle branch block beat, left bundle branch block beat, atrial premature contraction beat, ventricular flutter wave beat, and ventricular escape beat. The one-dimensional ECG time series signals are transformed into 2-D spectrograms through short-time Fourier transform. The 2-D CNN model consisting of four convolutional layers and four pooling layers is designed for extracting robust features from the input spectrograms. Our proposed methodology is evaluated on a publicly available MIT-BIH arrhythmia dataset. We achieved a state-of-the-art average classification accuracy of 99.11\%, which is better than those of recently reported results in classifying similar types of arrhythmias. The performance is significant in other indices as well, including sensitivity and specificity, which indicates the success of the proposed method.Comment: 14 pages, 5 figures, accepted for future publication in Remote Sensing MDPI Journa

Learning to Recover Spectral Reflectance from RGB Images

This paper tackles spectral reflectance recovery (SRR) from RGB images. Since capturing ground-truth spectral reflectance and camera spectral sensitivity are challenging and costly, most existing approaches are trained on synthetic images and utilize the same parameters for all unseen testing images, which are suboptimal especially when the trained models are tested on real images because they never exploit the internal information of the testing images. To address this issue, we adopt a self-supervised meta-auxiliary learning (MAXL) strategy that fine-tunes the well-trained network parameters with each testing image to combine external with internal information. To the best of our knowledge, this is the first work that successfully adapts the MAXL strategy to this problem. Instead of relying on naive end-to-end training, we also propose a novel architecture that integrates the physical relationship between the spectral reflectance and the corresponding RGB images into the network based on our mathematical analysis. Besides, since the spectral reflectance of a scene is independent to its illumination while the corresponding RGB images are not, we recover the spectral reflectance of a scene from its RGB images captured under multiple illuminations to further reduce the unknown. Qualitative and quantitative evaluations demonstrate the effectiveness of our proposed network and of the MAXL. Our code and data are available at https://github.com/Dong-Huo/SRR-MAXL

A Comprehensive Survey of Deep Learning in Remote Sensing: Theories, Tools and Challenges for the Community

In recent years, deep learning (DL), a re-branding of neural networks (NNs), has risen to the top in numerous areas, namely computer vision (CV), speech recognition, natural language processing, etc. Whereas remote sensing (RS) possesses a number of unique challenges, primarily related to sensors and applications, inevitably RS draws from many of the same theories as CV; e.g., statistics, fusion, and machine learning, to name a few. This means that the RS community should be aware of, if not at the leading edge of, of advancements like DL. Herein, we provide the most comprehensive survey of state-of-the-art RS DL research. We also review recent new developments in the DL field that can be used in DL for RS. Namely, we focus on theories, tools and challenges for the RS community. Specifically, we focus on unsolved challenges and opportunities as it relates to (i) inadequate data sets, (ii) human-understandable solutions for modelling physical phenomena, (iii) Big Data, (iv) non-traditional heterogeneous data sources, (v) DL architectures and learning algorithms for spectral, spatial and temporal data, (vi) transfer learning, (vii) an improved theoretical understanding of DL systems, (viii) high barriers to entry, and (ix) training and optimizing the DL.Comment: 64 pages, 411 references. To appear in Journal of Applied Remote Sensin

Pixel Adaptive Deep Unfolding Transformer for Hyperspectral Image Reconstruction

Hyperspectral Image (HSI) reconstruction has made gratifying progress with the deep unfolding framework by formulating the problem into a data module and a prior module. Nevertheless, existing methods still face the problem of insufficient matching with HSI data. The issues lie in three aspects: 1) fixed gradient descent step in the data module while the degradation of HSI is agnostic in the pixel-level. 2) inadequate prior module for 3D HSI cube. 3) stage interaction ignoring the differences in features at different stages. To address these issues, in this work, we propose a Pixel Adaptive Deep Unfolding Transformer (PADUT) for HSI reconstruction. In the data module, a pixel adaptive descent step is employed to focus on pixel-level agnostic degradation. In the prior module, we introduce the Non-local Spectral Transformer (NST) to emphasize the 3D characteristics of HSI for recovering. Moreover, inspired by the diverse expression of features in different stages and depths, the stage interaction is improved by the Fast Fourier Transform (FFT). Experimental results on both simulated and real scenes exhibit the superior performance of our method compared to state-of-the-art HSI reconstruction methods. The code is released at: https://github.com/MyuLi/PADUT.Comment: ICCV 202

Radiometrically-Accurate Hyperspectral Data Sharpening

Improving the spatial resolution of hyperpsectral image (HSI) has traditionally been an important topic in the field of remote sensing. Many approaches have been proposed based on various theories including component substitution, multiresolution analysis, spectral unmixing, Bayesian probability, and tensor representation. However, these methods have some common disadvantages, such as that they are not robust to different up-scale ratios and they have little concern for the per-pixel radiometric accuracy of the sharpened image. Moreover, many learning-based methods have been proposed through decades of innovations, but most of them require a large set of training pairs, which is unpractical for many real problems. To solve these problems, we firstly proposed an unsupervised Laplacian Pyramid Fusion Network (LPFNet) to generate a radiometrically-accurate high-resolution HSI. First, with the low-resolution hyperspectral image (LR-HSI) and the high-resolution multispectral image (HR-MSI), the preliminary high-resolution hyperspectral image (HR-HSI) is calculated via linear regression. Next, the high-frequency details of the preliminary HR-HSI are estimated via the subtraction between it and the CNN-generated-blurry version. By injecting the details to the output of the generative CNN with the low-resolution hyperspectral image (LR-HSI) as input, the final HR-HSI is obtained. LPFNet is designed for fusing the LR-HSI and HR-MSI covers the same Visible-Near-Infrared (VNIR) bands, while the short-wave infrared (SWIR) bands of HSI are ignored. SWIR bands are equally important to VNIR bands, but their spatial details are more challenging to be enhanced because the HR-MSI, used to provide the spatial details in the fusion process, usually has no SWIR coverage or lower-spatial-resolution SWIR. To this end, we designed an unsupervised cascade fusion network (UCFNet) to sharpen the Vis-NIR-SWIR LR-HSI. First, the preliminary high-resolution VNIR hyperspectral image (HR-VNIR-HSI) is obtained with a conventional hyperspectral algorithm. Then, the HR-MSI, the preliminary HR-VNIR-HSI, and the LR-SWIR-HSI are passed to the generative convolutional neural network to produce an HR-HSI. In the training process, the cascade sharpening method is employed to improve stability. Furthermore, the self-supervising loss is introduced based on the cascade strategy to further improve the spectral accuracy. Experiments are conducted on both LPFNet and UCFNet with different datasets and up-scale ratios. Also, state-of-the-art baseline methods are implemented and compared with the proposed methods with different quantitative metrics. Results demonstrate that proposed methods outperform the competitors in all cases in terms of spectral and spatial accuracy