564 research outputs found

    High-throughput estimation of crop traits: A review of ground and aerial phenotyping platforms

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    Crop yields need to be improved in a sustainable manner to meet the expected worldwide increase in population over the coming decades as well as the effects of anticipated climate change. Recently, genomics-assisted breeding has become a popular approach to food security; in this regard, the crop breeding community must better link the relationships between the phenotype and the genotype. While high-throughput genotyping is feasible at a low cost, highthroughput crop phenotyping methods and data analytical capacities need to be improved. High-throughput phenotyping offers a powerful way to assess particular phenotypes in large-scale experiments, using high-tech sensors, advanced robotics, and imageprocessing systems to monitor and quantify plants in breeding nurseries and field experiments at multiple scales. In addition, new bioinformatics platforms are able to embrace large-scale, multidimensional phenotypic datasets. Through the combined analysis of phenotyping and genotyping data, environmental responses and gene functions can now be dissected at unprecedented resolution. This will aid in finding solutions to currently limited and incremental improvements in crop yields

    Evaluation of the UAV-Based Multispectral Imagery and Its Application for Crop Intra-Field Nitrogen Monitoring and Yield Prediction in Ontario

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    Unmanned Aerial Vehicle (UAV) has the capability of acquiring high spatial and temporal resolution images. This new technology fills the data gap between satellite and ground survey in agriculture. In addition, UAV-based crop monitoring and methods are new challenge of remote sensing application in agriculture. First, in my thesis the potential of UAV-based imagery was investigated to monitor spatial and temporal variation of crop status in comparison with RapidEye. The correlation between red-edge indices and LAI and biomass are higher for UAV-based imagery than that of RapidEye. Secondly, the nitrogen weight and yield in wheat was predicted using the UAV-based imagery. The intra-field nitrogen prediction model performs well at wheat early growth stage. Additionally, the best data collection time for yield prediction is at the end of booting stage. The results demonstrate the UAV-based data could be an alternative effective and affordable approach for farmers on intra-field management

    Monitoring Agronomic Parameters of Winter Wheat Crops with Low-Cost UAV Imagery

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    Monitoring the dynamics in wheat crops requires near-term observations with high spatial resolution due to the complex factors influencing wheat growth variability. We studied the prospects for monitoring the biophysical parameters and nitrogen status in wheat crops with low-cost imagery acquired from unmanned aerial vehicles (UAV) over an 11 ha field. Flight missions were conducted at approximately 50 m in altitude with a commercial copter and camera system—three missions were performed between booting and maturing of the wheat plants and one mission after tillage. Ultra-high resolution orthoimages of 1.2 cm·px−1 and surface models were generated for each mission from the standard red, green and blue (RGB) aerial images. The image variables were extracted from image tone and surface models, e.g., RGB ratios, crop coverage and plant height. During each mission, 20 plots within the wheat canopy with 1 × 1 m2 sample support were selected in the field, and the leaf area index, plant height, fresh and dry biomass and nitrogen concentrations were measured. From the generated UAV imagery, we were able to follow the changes in early senescence at the individual plant level in the wheat crops. Changes in the pattern of the wheat canopy varied drastically from one mission to the next, which supported the need for instantaneous observations, as delivered by UAV imagery. The correlations between the biophysical parameters and image variables were highly significant during each mission, and the regression models calculated with the principal components of the image variables yielded R2 values between 0.70 and 0.97. In contrast, the models of the nitrogen concentrations yielded low R2 values with the best model obtained at flowering (R2 = 0.65). The nitrogen nutrition index was calculated with an accuracy of 0.10 to 0.11 NNI for each mission. For all models, information about the surface models and image tone was important. We conclude that low-cost RGB UAV imagery will strongly aid farmers in observing biophysical characteristics, but it is limited for observing the nitrogen status within wheat crops

    Uumanned Aerial Vehicle Data Analysis For High-throughput Plant Phenotyping

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    The continuing population is placing unprecedented demands on worldwide crop yield production and quality. Improving genomic selection for breeding process is one essential aspect for solving this dilemma. Benefitted from the advances in high-throughput genotyping, researchers already gained better understanding of genetic traits. However, given the comparatively lower efficiency in current phenotyping technique, the significance of phenotypic traits has still not fully exploited in genomic selection. Therefore, improving HTPP efficiency has become an urgent task for researchers. As one of the platforms utilized for collecting HTPP data, unmanned aerial vehicle (UAV) allows high quality data to be collected within short time and by less labor. There are currently many options for customized UAV system on market; however, data analysis efficiency is still one limitation for the fully implementation of HTPP. To this end, the focus of this program was data analysis of UAV acquired data. The specific objectives were two-fold, one was to investigate statistical correlations between UAV derived phenotypic traits and manually measured sorghum biomass, nitrogen and chlorophyll content. Another was to conduct variable selection on the phenotypic parameters calculated from UAV derived vegetation index (VI) and plant height maps, aiming to find out the principal parameters that contribute most in explaining winter wheat grain yield. Corresponding, two studies were carried out. Good correlations between UAV-derived VI/plant height and sorghum biomass/nitrogen/chlorophyll in the first study suggested that UAV-based HTPP has great potential in facilitating genetic improvement. For the second study, variable selection results from the single-year data showed that plant height related parameters, especially from later season, contributed more in explaining grain yield. Advisor: Yeyin Sh

    Use of an Active Canopy Sensor Mounted on an Unmanned Aerial Vehicle to Monitor the Growth and Nitrogen Status of Winter Wheat

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    Using remote sensing to rapidly acquire large-area crop growth information (e.g., shoot biomass, nitrogen status) is an urgent demand for modern crop production; unmanned aerial vehicle (UAV) acts as an effective monitoring platform. In order to improve the practicability and efficiency of UAV based monitoring technique, four field experiments involving different nitrogen (N) rates (0–360 kg N ha−1 ) and seven winter wheat (Triticum aestivum L.) varieties were conducted at different eco-sites (Sihong, Rugao, and Xinghua) during 2015–2019. A multispectral active canopy sensor (RapidSCAN CS-45; Holland Scientific Inc., Lincoln, NE, USA) mounted on a multirotor UAV platform was used to collect the canopy spectral reflectance data of winter wheat at key growth stages, three growth parameters (leaf area index (LAI), leaf dry matter (LDM), plant dry matter (PDM)) and three N indicators (leaf N accumulation (LNA), plant N accumulation (PNA) and N nutrition index (NNI)) were measured synchronously. The quantitative linear relationships between spectral data and six growth indices were systematically analyzed. For monitoring growth and N nutrition status at Feekes stages 6.0–10.0, 10.3–11.1 or entire growth stages, red edge ratio vegetation index (RERVI), red edge chlorophyll index (CIRE) and difference vegetation index (DVI) performed the best among the red edge band-based and red-based vegetation indices, respectively. Across all growth stages, DVI was highly correlated with LAI (R2 = 0.78), LDM (R2 = 0.61), PDM (R2 = 0.63), LNA (R2 = 0.65) and PNA (R2 = 0.73), whereas the relationships between RERVI (R2 = 0.62), CIRE (R2 = 0.62) and NNI had high coefficients of determination. The developed models performed better in monitoring growth indices and N status at Feekes stages 10.3–11.1 than Feekes stages 6.0–10.0. To sum it up, the UAV-mounted active sensor system is able to rapidly monitor the growth and N nutrition status of winter wheat and can be deployed for UAV-based remote-sensing of crops

    Last generation instrument for agriculture multispectral data collection

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    In recent years, the acquisition and analysis of multispectral data are gaining a growing interest and importance in agriculture. On the other hand, new technologies are opening up for the possibility of developing and implementing sensors with relatively small size and featuring high technical performances. Thanks to low weights and high signal to noise ratios, such sensors can be transported by different type of means (terrestrial as well as aerial vehicles), giving new opportunities for assessment and monitoring of several crops at different growing stages or health conditions. The choice and specialization of individual bands within the electromagnetic spectrum ranging from the ultraviolet to the infrared, plays a fundamental role in the definition of the so-called vegetation indices (eg. NDVI, GNDVI, SAVI, and dozens of others), posing new questions and challenges in their effective implementation. The present paper firstly discusses the needs of low-distance based sensors for indices calculation, then focuses on development of a new multispectral instrument specially developed for agricultural multispectral analysis. Such instrument features high frequency and high resolution imaging through nine different sensors (1 RGB and 8 monochromes with relative band-pass filters, covering the 390 to 950 nm range). The instrument allows synchronized multiband imaging thanks to integrated global shutter technology, with a frame rate up to 5 Hz; exposure time can be as low as 1/5000 s. An applicative case study is eventually reported on an area featuring different materials (organic and non-organic), to show the new instrument potential. Last generation instrument for agriculture multispectral data collection. Available from: https://www.researchgate.net/publication/317596952_Last_generation_instrument_for_agriculture_multispectral_data_collection [accessed Jul 11, 2017]

    Automatic Identification and Monitoring of Plant Diseases Using Unmanned Aerial Vehicles: A Review

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    Disease diagnosis is one of the major tasks for increasing food production in agriculture. Although precision agriculture (PA) takes less time and provides a more precise application of agricultural activities, the detection of disease using an Unmanned Aerial System (UAS) is a challenging task. Several Unmanned Aerial Vehicles (UAVs) and sensors have been used for this purpose. The UAVs’ platforms and their peripherals have their own limitations in accurately diagnosing plant diseases. Several types of image processing software are available for vignetting and orthorectification. The training and validation of datasets are important characteristics of data analysis. Currently, different algorithms and architectures of machine learning models are used to classify and detect plant diseases. These models help in image segmentation and feature extractions to interpret results. Researchers also use the values of vegetative indices, such as Normalized Difference Vegetative Index (NDVI), Crop Water Stress Index (CWSI), etc., acquired from different multispectral and hyperspectral sensors to fit into the statistical models to deliver results. There are still various drifts in the automatic detection of plant diseases as imaging sensors are limited by their own spectral bandwidth, resolution, background noise of the image, etc. The future of crop health monitoring using UAVs should include a gimble consisting of multiple sensors, large datasets for training and validation, the development of site-specific irradiance systems, and so on. This review briefly highlights the advantages of automatic detection of plant diseases to the growers

    Remote Sensing for Precision Nitrogen Management

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    This book focuses on the fundamental and applied research of the non-destructive estimation and diagnosis of crop leaf and plant nitrogen status and in-season nitrogen management strategies based on leaf sensors, proximal canopy sensors, unmanned aerial vehicle remote sensing, manned aerial remote sensing and satellite remote sensing technologies. Statistical and machine learning methods are used to predict plant-nitrogen-related parameters with sensor data or sensor data together with soil, landscape, weather and/or management information. Different sensing technologies or different modelling approaches are compared and evaluated. Strategies are developed to use crop sensing data for in-season nitrogen recommendations to improve nitrogen use efficiency and protect the environment
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