An island based hybrid evolutionary algorithm for optimization

This is a post-print version of the article - Copyright @ 2008 Springer-VerlagEvolutionary computation has become an important problem solving methodology among the set of search and optimization techniques. Recently, more and more different evolutionary techniques have been developed, especially hybrid evolutionary algorithms. This paper proposes an island based hybrid evolutionary algorithm (IHEA) for optimization, which is based on Particle swarm optimization (PSO), Fast Evolutionary Programming (FEP), and Estimation of Distribution Algorithm (EDA). Within IHEA, an island model is designed to cooperatively search for the global optima in search space. By combining the strengths of the three component algorithms, IHEA greatly improves the optimization performance of the three basic algorithms. Experimental results demonstrate that IHEA outperforms all the three component algorithms on the test problems.This work was supported by the Engineering and Physical Sciences Research Council (EPSRC) of UK under Grant EP/E060722/1

A self-learning particle swarm optimizer for global optimization problems

Copyright @ 2011 IEEE. All Rights Reserved. This article was made available through the Brunel Open Access Publishing Fund.Particle swarm optimization (PSO) has been shown as an effective tool for solving global optimization problems. So far, most PSO algorithms use a single learning pattern for all particles, which means that all particles in a swarm use the same strategy. This monotonic learning pattern may cause the lack of intelligence for a particular particle, which makes it unable to deal with different complex situations. This paper presents a novel algorithm, called self-learning particle swarm optimizer (SLPSO), for global optimization problems. In SLPSO, each particle has a set of four strategies to cope with different situations in the search space. The cooperation of the four strategies is implemented by an adaptive learning framework at the individual level, which can enable a particle to choose the optimal strategy according to its own local fitness landscape. The experimental study on a set of 45 test functions and two real-world problems show that SLPSO has a superior performance in comparison with several other peer algorithms.This work was supported by the Engineering and Physical Sciences Research Council of U.K. under Grants EP/E060722/1 and EP/E060722/2

Inferring phylogenetic networks with maximum pseudolikelihood under incomplete lineage sorting

Phylogenetic networks are necessary to represent the tree of life expanded by edges to represent events such as horizontal gene transfers, hybridizations or gene flow. Not all species follow the paradigm of vertical inheritance of their genetic material. While a great deal of research has flourished into the inference of phylogenetic trees, statistical methods to infer phylogenetic networks are still limited and under development. The main disadvantage of existing methods is a lack of scalability. Here, we present a statistical method to infer phylogenetic networks from multi-locus genetic data in a pseudolikelihood framework. Our model accounts for incomplete lineage sorting through the coalescent model, and for horizontal inheritance of genes through reticulation nodes in the network. Computation of the pseudolikelihood is fast and simple, and it avoids the burdensome calculation of the full likelihood which can be intractable with many species. Moreover, estimation at the quartet-level has the added computational benefit that it is easily parallelizable. Simulation studies comparing our method to a full likelihood approach show that our pseudolikelihood approach is much faster without compromising accuracy. We applied our method to reconstruct the evolutionary relationships among swordtails and platyfishes ($Xiphophorus$: Poeciliidae), which is characterized by widespread hybridizations

Genetic algorithms with immigrants and memory schemes for dynamic shortest path routing problems in mobile ad hoc networks

This article is posted here with permission of IEEE - Copyright @ 2010 IEEEIn recent years, the static shortest path (SP) problem has been well addressed using intelligent optimization techniques, e.g., artificial neural networks, genetic algorithms (GAs), particle swarm optimization, etc. However, with the advancement in wireless communications, more and more mobile wireless networks appear, e.g., mobile networks [mobile ad hoc networks (MANETs)], wireless sensor networks, etc. One of the most important characteristics in mobile wireless networks is the topology dynamics, i.e., the network topology changes over time due to energy conservation or node mobility. Therefore, the SP routing problem in MANETs turns out to be a dynamic optimization problem. In this paper, we propose to use GAs with immigrants and memory schemes to solve the dynamic SP routing problem in MANETs. We consider MANETs as target systems because they represent new-generation wireless networks. The experimental results show that these immigrants and memory-based GAs can quickly adapt to environmental changes (i.e., the network topology changes) and produce high-quality solutions after each change.This work was supported by the Engineering and Physical Sciences Research Council of U.K. underGrant EP/E060722/

Minimum length-scale constraints for parameterized implicit function based topology optimization

Open access via Springer Compact Agreement The author would like to thank the Numerical Analysis Group at the Rutherford Appleton Laboratory for their FORTRAN HSL packages (HSL, a collection of Fortran codes for large-scale scientific computation. See http://www.hsl.rl.ac.uk/). The author also would like to acknowledge the support of the Maxwell compute cluster funded by the University of Aberdeen. Finally, the author thanks the anonymous reviewers for their helpful comments and suggestions that improved this paper.Peer reviewedPublisher PD

Layout optimization for multi-bi-modulus materials system under multiple load cases

Financial support from the National Natural Science Foundation of China (Grant No. 51179164) and the Australian Research Council (Grant No. DP140103137) is acknowledged