Construction of artificial skin tissue with placode-like structures in well-defined patterns using dielectrophoresis

During embryonic development of animal skin tissue, the skin cells form regular patterns of high cell density (placodes) where hair or feathers will be formed. These placodes are thought to be formed by the aggregation of dermal cells into condensates. The aggregation process is thought to be controlled by a reaction-diffusion mechanism of activator and inhibitor molecules, and involve mechanical forces between cells and cells with the matrix. In this project, placode formation in chicken embryonic skin cells was used as a model system for the study of the mechanism by which the placodes are formed. Artificial aggregates of chicken embryonic skin cells were created by suspending them in a 300 mM low conductivity sorbitol solution and attracting them by positive dielectrophoresis to high field regions within microelectrode arrays by applying a 10 - 20 Vpk-pk 1 MHz signal across the microelectrodes. It was demonstrated that using this method aggregates can be produced in a large variety of patterns and that the distance between the aggregates and aggregate size and shape within the pattern can be controlled effectively. Custom-built image analysis tools were developed in LabVIEW to analyze the patterns formed. The formation of aggregates by dielectrophoresis was followed by an immobilization phase of the resulting patterns inside a gel matrix, forming an artificial skin. Nutrients and oxygen were supplied externally. Long-term incubation of the artificial skin shows that embryonic skin cells in the aggregates were viable and showed behavior similar to that of developing embryonic skin, including further aggregation of the cells and the formation of cell condensates. The domain size was shown to have an influence on the condensation process, with cells in small aggregates forming only one condensate near the centre of the aggregate, and several condensates in larger aggregates. Whilst the distribution of cell condensates within the aggregates in round large aggregates is predominantly random, some line formation could be observed in linear aggregations, indicating some self-organization may be occurring

모세관 현상 기반의 패터닝 기법을 활용한 고효율 삼차원 면역세포 항암효능 평가 플랫폼

학위논문 (박사) -- 서울대학교 대학원 : 공과대학 기계공학부, 2020. 8. 전누리.Organs-on-chips have been developed for recapitulating human organ functions in in vitro as microfabrication techniques meet biology since the early 2000s. Specifically, polydimethylsiloxane (PDMS) based microfluidic devices enabled to mimic organ functions by providing spatially compartmented cell patterning for culturing cells with in vivo like layout. The selective cell patterning enabled 3D cell culture and spatiotemporal analysis which were challenging to conduct with conventional cell culturewares such as petri-dishes, flasks, and well-plates. However, traditional organs-on-chips have limitations in salability, experimental throughput, and absence of standard due to their closed channel designs based on PDMS. Here, we introduce two capillarity guided patterning (CGP) methods by integrating microstructures with conventional cell culturewares. First, we fabricated micropillar arrays on open polystyrene (PS) surfaces and the micropillars can capture liquids swept over the surface. Using the devices, we demonstrated 3D culture applications, single cell capturing and retrieval and multiple cell co-culture. Second, we integrated rail-structures with microplate. Beneath a rail-structure, hydrogel precursors can selectively remain according to meniscus dynamics when the pre-loaded precursors are aspirated. These two CGP methods can be produced with injection molding and provide enhanced experimental throughput. Using the rail-based CGP method, we developed a 3D cytotoxicity assay for cancer immunotherapy based on an injection molded plastic culture (CACI-IMPACT) device to assess killing abilities of cytotoxic lymphocytes in 3D microenvironment through a spatiotemporal analysis of the lymphocytes and cancer cells embedded in 3D extra cellular matrix (ECM). Owing to the aspiration-mediated patterning, hydrogel precursors can be patterned in 12 wells within 30 s. For functional evaluation of the cytotoxic lymphocytes engineered for cancer immunotherapy, HeLa cells encapsulated by collagen matrix were patterned beneath low rails and NK-92 cells were loaded into the channel formed by the collagen matrix. We observed infiltration, migration and killing activity of NK-92 cells against HeLa cells in collagen matrix. Through image-based analysis, we found ECM significantly influences migration and cytotoxicity of lymphocytes. Hence, the CACI-IMPACT platform has the potential to be used for pre-clinical evaluation of ex vivo engineered cytotoxic lymphocytes for cancer immunotherapy against solid tumors, and the CGP methods are expected to accelerate the commercialization of organs-on-chips.장기모사칩은 2000년대 초부터 마이크로 공정 기술이 생물학적 연구에 활용됨에 따라 인간 장기 기능을 모사하기 위해 개발되었다. 구체적으로, polydimethylsiloxane (PDMS) 기반 미세유체 장치는 공간적으로 구분된 세포 패터닝을 가능케 함으로써 생체와 유사한 구조로 세포를 배양할 수 있게 해주었다. 이러한 세포 패터닝은 페트리 디쉬, 플라스크, 혹은 웰플레이트와 같은 기존의 세포 배양 도구에서는 수행하기 어려운 삼차원 세포 배양과 그 안에서의 시공간적 분석을 가능하게 하였다. 하지만, 종래의 장기모사칩은 PDMS에 기반한 닫힌 형태의 채널 설계로 인해 낮은 생산성, 낮은 실험 효율, 낮은 장비 호환성을 갖는다. 따라서, 본 연구는 대중적인 세포 배양 장치들에 마이크로 구조물을 통합한 두가지 모세관 현상 기반의 패터닝 방법을 제시한다. 첫번째 방법은 페트리 디쉬나 polystyrene (PS) 필름과 같이 개방된 PS 표면에 마이크로 기둥 어레이를 제작하여 그 위에서 액체가 쓸려 지나갈 때 기둥 구조물들 사이에 액체를 포획하는 방식이다. 마이크로 기둥 어레이의 배치에 따라 나노리터부터 마이크로리터에 이르는 액체를 빠르게 패터닝할 수 있게 한다. 이러한 기둥 구조를 활용하면 다양한 세포의 배치 및 배양이 가능하여, 본 연구에서는 삼차원 환경에서의 단일세포 배양과 다세포 공배양 플랫폼으로의 활용 가능성을 제시하였다. 두번째 방법은 마이크로 레일 형태의 마이크로구조물을 표준화된 마이크로 플레이트의 웰과 통합하여 고효율 삼차원 배양 플랫폼을 제시한다. 레일 구조의 아래에 주입된 액체가 빨아들여질 때 구조물에 의해 형성된 액체-기체 계면들의 순차적 이동을 활용하여 특정 레일의 아래에만 액체를 남기는 기술을 개발하였다. 이 두가지 모세관 현상 기반 패터닝 방법을 위한 장치들은 사출성형으로 대량생산이 가능하고 우수한 실험 효율을 갖는다. 이 중 레일 구조를 활용한 흡인 기반의 패터닝 방법을 이용하여 면역세포치료제의 성능 평가를 위한 사출 성형된 플라스틱 어레이 배양 장치 (CACI-IMPACT)를 개발하였다. 흡인 기반 패터닝 덕분에 20 μl 파이펫으로 빨아들인 하이드로젤 용액을 30 초 이내에 12개의 웰에 패터닝 할 수 있었다. 면역세포치료제의 기능적 평가를 위해, 콜라겐 젤에 포함된 HeLa 세포를 패터닝하고 NK-92 세포의 콜라겐 매트릭스 내부로의 침투, 매트릭스 내부에서의 이동 및 암세포 살해 활동을 관찰하였다. 이를 통해 세포외기질이 세포 독성 림프구의 이동 및 세포 독성에 상당히 영향을 미친다는 것을 확인할 수 있었다. 따라서, 암세포와 세포 독성 림프구의 고효율 삼차원 공동 배양을 가능하게 하는 본 플랫폼은 고형 종양에 대한 면역 치료를 위해 개발된 세포 독성 림프구의 전임상 평가에 사용될 가능성이 있으며, 본 연구에서 개발 및 사용된 모세관 현상 기반 패터닝 기술들은 장기모사칩의 상용화를 가속화시킬 것으로 기대한다.Chapter 1. Introduction 1 1.1. History of organs-on-chips 1 1.2. Challenges in current organs-on-chips 4 1.3. Models for cancer immunotherapy 7 1.4. Purpose of research 8 Chapter 2. Microstructure-guided multi-scale liquid patterning on open surface 11 2.1. Introduction 11 2.2. Materials and Methods 13 2.2.1. Fabrication of the microstructured PS surface 13 2.2.2. Single cell isolation and retrieval of single colony 16 2.2.3. In vitro vasculogenesis 17 2.2.4. Visualization of the in vitro blood vessel 19 2.3. Results and discussion 18 2.3.1. Liquid patterning process 18 2.3.2. Comparison of microliquid trapping with a micropillar array and microwells 30 2.3.3. Arrangement of micropillars for controlling the volume and shape of patterned liquids 33 2.3.4. Single cell culture & recovery platform 37 2.3.5. Sequential patterning for co-culture in a 3D microenvironment 42 2.4. Conclusions 46 Chapter 3. Aspiration-mediated microliquid patterning using rail-based open microfluidics 47 3.1. Introduction 47 3.2 Materials and Methods 50 3.2.1. Fabrication of open microfluidic devices 50 3.2.2. Cell culture 50 3.2.3. Hydrogel micropatterning 51 3.2.4. Image analysis 52 3.3. Results 53 3.3.1. Microstructures for aspiration-mediated patterning 53 3.3.2. Theoretical analysis of microchannel formation 56 3.3.3. Formation of multiple discrete microchannels 63 3.3.4. An application for screening vasculogenic capacities 70 3.4. Conclusions 75 Chapter 4. High-throughput microfluidic 3D cytotoxicity assay for cancer immunotherapy 77 4.1. Introduction 77 4.2. Materials and Methods 81 4.2.1. Cell culture 81 4.2.2. Fluorescent labeling of live and dead cells 81 4.2.3. 3D cytotoxicity assay using gel patterned device 82 4.2.4. Image analysis 83 4.2.5. 2D cytotoxicity assay 84 4.3. Results 84 4.3.1. Design and fabrication of devices 84 4.3.2. Cytotoxicity assay in 3D ECM environment 89 4.3.3. 3D ECM reduce cytotoxicity 94 4.3.4. Dense ECM impede migration of CLs 98 4.4. Conclusions 104 Chapter 5. Concluding Remarks 110 Bibliography 113 Abstract in Korean 124Docto

Shaping surface acoustic waves for cardiac tissue engineering

The heart is a non-regenerating organ that gradually suffers a loss of cardiac cells and functionality. Given the scarcity of organ donors and complications in existing medical implantation solutions, it is desired to engineer a three-dimensional architecture to successfully control the cardiac cells in vitro and yield true myocardial structures similar to native heart. This thesis investigates the synthesis of a biocompatible gelatin methacrylate hydrogel to promote growth of cardiac cells using biotechnology methodology: surface acoustic waves, to create cell sheets. Firstly, the synthesis of a photo-crosslinkable gelatin methacrylate (GelMA) hydrogel was investigated with different degree of methacrylation concentration. The porous matrix of the hydrogel should be biocompatible, allow cell-cell interaction and promote cell adhesion for growth through the porous network of matrix. The rheological properties, such as polymer concentration, ultraviolet exposure time, viscosity, elasticity and swelling characteristics of the hydrogel were investigated. In tissue engineering hydrogels have been used for embedding cells to mimic native microenvironments while controlling the mechanical properties. Gelatin methacrylate hydrogels have the advantage of allowing such control of mechanical properties in addition to easy compatibility with Lab-on-a-chip methodologies. Secondly in this thesis, standing surface acoustic waves were used to control the degree of movement of cells in the hydrogel and produce three-dimensional engineered scaffolds to investigate in-vitro studies of cardiac muscle electrophysiology and cardiac tissue engineering therapies for myocardial infarction. The acoustic waves were characterized on a piezoelectric substrate, lithium niobate that was micro-fabricated with slanted-finger interdigitated transducers for to generate waves at multiple wavelengths. This characterization successfully created three-dimensional micro-patterning of cells in the constructs through means of one- and two-dimensional non-invasive forces. The micro-patterning was controlled by tuning different input frequencies that allowed manipulation of the cells spatially without any pre- treatment of cells, hydrogel or substrate. This resulted in a synchronous heartbeat being produced in the hydrogel construct. To complement these mechanical forces, work in dielectrophoresis was conducted centred on a method to pattern micro-particles. Although manipulation of particles were shown, difficulties were encountered concerning the close proximity of particles and hydrogel to the microfabricated electrode arrays, dependence on conductivity of hydrogel and difficult manoeuvrability of scaffold from the surface of electrodes precluded measurements on cardiac cells. In addition, COMSOL Multiphysics software was used to investigate the mechanical and electrical forces theoretically acting on the cells. Thirdly, in this thesis the cardiac electrophysiology was investigated using immunostaining techniques to visualize the growth of sarcomeres and gap junctions that promote cell-cell interaction and excitation-contraction of heart muscles. The physiological response of beating of co-cultured cardiomyocytes and cardiac fibroblasts was observed in a synchronous and simultaneous manner closely mimicking the native cardiac impulses. Further investigations were carried out by mechanically stimulating the cells in the three-dimensional hydrogel using standing surface acoustic waves and comparing with traditional two-dimensional flat surface coated with fibronectin. The electrophysiological responses of the cells under the effect of the mechanical stimulations yielded a higher magnitude of contractility, action potential and calcium transient

Surface tension assisted lithography (STAL): a novel microfabrication techniques for microfluidics

Many fundamental fields of research have highly advanced in the last three decades due to the unprecedented precision and complexity enabled by the microfabrication technology. Fabrication of 3D microstructures such as simple spherical and cylindrical shapes is highly desired to accurately mimic the natural phenomena in a research environment. Surprisingly, 3D microstructures are commonly avoided if devices are to be realised using typical, planar microfabrication methods due to the limited capabilities of producing 3D structures. In fact, photolithography, the traditional and the most common method for mass-production of microfabricated systems, allows definition of almost arbitrarily complex shapes on planar surfaces, but has limited capability of producing 3D structures. Several other non-planar microfabrication techniques have been reported such as direct laser writing, inclined UV lithography, and the surface wrinkling. However, none can be considered as a true contender to the photolithography, due to the fact that each of them is subject to some combination of the following problems: costly infrastructure, long write times, poor feature addressing, poor resolution, and lack of control. This thesis explores the potential of utilising surface tension driven techniques for 3D microfabrications. The surface tension driven techniques appear promising, due to the key advantages namely, exceptionally smooth surface, cost effectiveness, and self alignment properties. Until now, little attention has been given to the surface tension driven techniques. The major contributions of this thesis include introducing, characterising, and implementing of the novel Surface Tension Assisted Lithography (STAL) technique for 3D microfabrication technique. STAL consists of a sequence of the following steps: soft lithography physically patterns the polymer, then UV exposure defines the reflow container, then a thermal treatment solidifies the container and reflows the unexposed region of the polymer, and finally an exposure ensures that the reflowed structures retain their shape. It is shown that STAL provides independent control over the height and diameter of the semi-spherical structures. There are many possible applications for 3D structures, even in the form of simple spherical caps. One of the applications of semi-spherical structures is demonstrated by fabricating novel semi-spherical microelectrodes for dielectrophoretic manipulation cells. Advantages of semi-spherical microelectrodes over 2D configurations are demonstrated through a series of experiments and numerical simulations. The potential of STAL to produce more complicated systems such as hybrid structures with planar posts integrated into STAL structures is also explored. A simplified model has been developed to predict the defection of the posts under surface tension. In the closing chapter of this thesis, the opportunities to extend STAL for producing more complex 3D structures are identified. Fabrication of convex 3D features with complex containers in the scale of conventional microfluidic structures is investigated. And also, the concept of patterning STAL structures photolithographically is explored. This combination can offer an opportunity to produce structures such as suction cups for hydrodynamic cell trapping

Microfluidics and Nanofluidics Handbook

The Microfluidics and Nanofluidics Handbook: Two-Volume Set comprehensively captures the cross-disciplinary breadth of the fields of micro- and nanofluidics, which encompass the biological sciences, chemistry, physics and engineering applications. To fill the knowledge gap between engineering and the basic sciences, the editors pulled together key individuals, well known in their respective areas, to author chapters that help graduate students, scientists, and practicing engineers understand the overall area of microfluidics and nanofluidics. Topics covered include Finite Volume Method for Numerical Simulation Lattice Boltzmann Method and Its Applications in Microfluidics Microparticle and Nanoparticle Manipulation Methane Solubility Enhancement in Water Confined to Nanoscale Pores Volume Two: Fabrication, Implementation, and Applications focuses on topics related to experimental and numerical methods. It also covers fabrication and applications in a variety of areas, from aerospace to biological systems. Reflecting the inherent nature of microfluidics and nanofluidics, the book includes as much interdisciplinary knowledge as possible. It provides the fundamental science background for newcomers and advanced techniques and concepts for experienced researchers and professionals

Novel Methods to Construct Microchannel Networks with Complex Topologies

Microfluidic technology is a useful tool to help answer unsolved problems in multidisciplinary fields, including molecular biology, clinical pathology and the pharmaceutical industry.Current microfluidic based devices with diverse structures have been constructed via extensively used soft lithography orphotolithography fabrication methods. A layer-by-layer stacking of 2D planar microchannel arrays can achieve limited degrees of three dimensionality. However, assembly of large-scale multi-tiered structures is tedious, and the inherently planar nature of the individual layers restricts the network’s topological complexity. In order to overcome the limitations of existing microfabrication methodswe demonstrate several novel methods that enable microvasculature networks: electrostatic discharge,global channel deformation and enzymatic sculpting to fabricate complex surface topologies. These methods enable construction of networks of branched microchannels arranged in a tree-like architecture with diameters ranging from approximately 10 μm to 1 mm. Interconnected networks with multiple fluidic access points can be straightforwardly constructed, and quantification of their branching characteristics reveals remarkable similarity to naturally occurring vasculature. In addition, by harnessing enzymatic micromachining we are able to construct nanochannels, microchannels containing embedded features templated by the substrate’s crystalline morphology, and an irregular cross section of microchannel capable of performing isolation and enrichment of cells from whole blood with throughput 1 – 2 orders of magnitude faster than currently possible. These techniques can play a key role in developing an organ-sized engineered tissue scaffolds and high-throughput continuous flow separations

Manipulation of polymeric fluids through pyro-electro-hydro-dynamics

This thesis is focused on the manipulation of liquids and polymeric fluids in a non-contact and electrode-free way, exploiting pyro-electro-hydro-dynamic systems. The thesis structure provides an introduction based on the theory and the combination between pyroelectric and electro-hydro-dynamic effect, with a focus on the developed techniques, followed by the presentation of the realized works. It will be presented the fabrication of micro-optical devices, in particular micro-lenses, through pyro-electro-hydro-dynamic effect. The attention will be directed toward the fabrication methods: in fact, they have been obtained by an ink-jet technology or through self-assembly on a micro-engineered pyroelectric crystal. In the first case, a new pyro-ink-jet set-up will be proposed and further modifications of the set-up, which will improve the flexibility of the technique, will be reported. The realized micro-lenses will be optically and geometrically characterized and it will be presented the fabrication of a multi-component device as an example of application of this technique. It will be shown that pyro-ink-jet printing permit to realize very uniform micro-lenses arrays with high resolution (diameter ̴ 300 nm). The second approach is based on the self-assembly of a micro-lenses array on a micro-engineered pyroelectric crystal. It will be showed an array decoration by nano-particles, such as quantum dots, and it will be presented the di-electro-phoretic effect on the employed dots. In particular, the study will focus on the effect of the patterned substrate on the localization of the nano-particles and on the investigation of the dots pattern transfer. Moreover, it will be shown another application of pyro-ink-jet printing: the capability of this system in the highly viscous solution manipulation allows the deposition of polymeric fibers and, in particular, how a fiber like these can be used as a component in a microfluidic channel. That demonstrates pyro-ink-jet printer is also an alternative to the classic electro-spinning system, avoiding electrodes and spiraling effect during the deposition. Produced fibers show great uniformity and reach thicknesses until the nano-metric scale. Moreover, there will be illustrated all the procedures realized to produce the micro-channel

Continuous focusing and separation of microparticles with acoustic and magnetic fields

Microfluidics enables a diverse range of manipulations (e.g., focusing, separating, trapping, and enriching) of micrometer-sized objects, and has played an increasingly important role for applications that involve single cell biology and the detection and diagnosis of diseases. In microfluidic devices, methods that are commonly used to manipulate cells or particles include the utilization of hydrodynamic effects and externally applied field gradients that induce forces on cells/particles, such as electrical fields, optical fields, magnetic fields, and acoustic fields. However, these conventional methods often involve complex designs or strongly depend on the properties of the flow medium or the interaction between the fluid and fluidic channels, so this dissertation aims to propose and demonstrate novel and low-cost techniques to fabricate microfluidic devices to separate microparticles with different sizes, materials and shapes by the optimized acoustic and magnetic fields. The first method is to utilize acoustic bubble-enhanced pinched flow for microparticle separation; the microfluidic separation of magnetic particles with soft magnetic microstructures is achieved in the second part; the third technique separates and focuses microparticles by multiphase ferrofluid flows; the fourth method realizes the fabrication and integration of microscale permanent magnets for particle separation in microfluidics; magnetic separation of microparticles by shape is proposed in the fifth technique. The methods demonstrated in this dissertation not only address some of the limitations of conventional microdevices, but also provide simple and efficient method for the separation of microparticles and biological cells with different sizes, materials and shapes, and will benefit practical microfluidic platforms concerning micron sized particles/cells --Abstract, page iv