4,861 research outputs found
A Deep Learning Framework for Unsupervised Affine and Deformable Image Registration
Image registration, the process of aligning two or more images, is the core
technique of many (semi-)automatic medical image analysis tasks. Recent studies
have shown that deep learning methods, notably convolutional neural networks
(ConvNets), can be used for image registration. Thus far training of ConvNets
for registration was supervised using predefined example registrations.
However, obtaining example registrations is not trivial. To circumvent the need
for predefined examples, and thereby to increase convenience of training
ConvNets for image registration, we propose the Deep Learning Image
Registration (DLIR) framework for \textit{unsupervised} affine and deformable
image registration. In the DLIR framework ConvNets are trained for image
registration by exploiting image similarity analogous to conventional
intensity-based image registration. After a ConvNet has been trained with the
DLIR framework, it can be used to register pairs of unseen images in one shot.
We propose flexible ConvNets designs for affine image registration and for
deformable image registration. By stacking multiple of these ConvNets into a
larger architecture, we are able to perform coarse-to-fine image registration.
We show for registration of cardiac cine MRI and registration of chest CT that
performance of the DLIR framework is comparable to conventional image
registration while being several orders of magnitude faster.Comment: Accepted: Medical Image Analysis - Elsevie
3-D Face Analysis and Identification Based on Statistical Shape Modelling
This paper presents an effective method of statistical shape representation for automatic face analysis and identification in 3-D. The method combines statistical shape modelling techniques and the non-rigid deformation matching scheme. This work is distinguished by three key contributions. The first is the introduction of a new 3-D shape registration method using hierarchical landmark detection and multilevel B-spline warping technique, which allows accurate dense correspondence search for statistical model construction. The second is the shape representation approach, based on Laplacian Eigenmap, which provides a nonlinear submanifold that links underlying structure of facial data. The third contribution is a hybrid method for matching the statistical model and test dataset which controls the levels of the model’s deformation at different matching stages and so increases chance of the successful matching. The proposed method is tested on the public database, BU-3DFE. Results indicate that it can achieve extremely high verification rates in a series of tests, thus providing real-world practicality
Review of the mathematical foundations of data fusion techniques in surface metrology
The recent proliferation of engineered surfaces, including freeform and structured surfaces, is challenging current metrology techniques. Measurement using multiple sensors has been proposed to achieve enhanced benefits, mainly in terms of spatial frequency bandwidth, which a single sensor cannot provide. When using data from different sensors, a process of data fusion is required and there is much active research in this area. In this paper, current data fusion methods and applications are reviewed, with a focus on the mathematical foundations of the subject. Common research questions in the fusion of surface metrology data are raised and potential fusion algorithms are discussed
Information-Theoretic Registration with Explicit Reorientation of Diffusion-Weighted Images
We present an information-theoretic approach to the registration of images
with directional information, and especially for diffusion-Weighted Images
(DWI), with explicit optimization over the directional scale. We call it
Locally Orderless Registration with Directions (LORD). We focus on normalized
mutual information as a robust information-theoretic similarity measure for
DWI. The framework is an extension of the LOR-DWI density-based hierarchical
scale-space model that varies and optimizes the integration, spatial,
directional, and intensity scales. As affine transformations are insufficient
for inter-subject registration, we extend the model to non-rigid deformations.
We illustrate that the proposed model deforms orientation distribution
functions (ODFs) correctly and is capable of handling the classic complex
challenges in DWI-registrations, such as the registration of fiber-crossings
along with kissing, fanning, and interleaving fibers. Our experimental results
clearly illustrate a novel promising regularizing effect, that comes from the
nonlinear orientation-based cost function. We show the properties of the
different image scales and, we show that including orientational information in
our model makes the model better at retrieving deformations in contrast to
standard scalar-based registration.Comment: 16 pages, 19 figure
Gaussian Process Morphable Models
Statistical shape models (SSMs) represent a class of shapes as a normal
distribution of point variations, whose parameters are estimated from example
shapes. Principal component analysis (PCA) is applied to obtain a
low-dimensional representation of the shape variation in terms of the leading
principal components. In this paper, we propose a generalization of SSMs,
called Gaussian Process Morphable Models (GPMMs). We model the shape variations
with a Gaussian process, which we represent using the leading components of its
Karhunen-Loeve expansion. To compute the expansion, we make use of an
approximation scheme based on the Nystrom method. The resulting model can be
seen as a continuous analogon of an SSM. However, while for SSMs the shape
variation is restricted to the span of the example data, with GPMMs we can
define the shape variation using any Gaussian process. For example, we can
build shape models that correspond to classical spline models, and thus do not
require any example data. Furthermore, Gaussian processes make it possible to
combine different models. For example, an SSM can be extended with a spline
model, to obtain a model that incorporates learned shape characteristics, but
is flexible enough to explain shapes that cannot be represented by the SSM. We
introduce a simple algorithm for fitting a GPMM to a surface or image. This
results in a non-rigid registration approach, whose regularization properties
are defined by a GPMM. We show how we can obtain different registration
schemes,including methods for multi-scale, spatially-varying or hybrid
registration, by constructing an appropriate GPMM. As our approach strictly
separates modelling from the fitting process, this is all achieved without
changes to the fitting algorithm. We show the applicability and versatility of
GPMMs on a clinical use case, where the goal is the model-based segmentation of
3D forearm images
Efficient Continuous-Time SLAM for 3D Lidar-Based Online Mapping
Modern 3D laser-range scanners have a high data rate, making online
simultaneous localization and mapping (SLAM) computationally challenging.
Recursive state estimation techniques are efficient but commit to a state
estimate immediately after a new scan is made, which may lead to misalignments
of measurements. We present a 3D SLAM approach that allows for refining
alignments during online mapping. Our method is based on efficient local
mapping and a hierarchical optimization back-end. Measurements of a 3D laser
scanner are aggregated in local multiresolution maps by means of surfel-based
registration. The local maps are used in a multi-level graph for allocentric
mapping and localization. In order to incorporate corrections when refining the
alignment, the individual 3D scans in the local map are modeled as a sub-graph
and graph optimization is performed to account for drift and misalignments in
the local maps. Furthermore, in each sub-graph, a continuous-time
representation of the sensor trajectory allows to correct measurements between
scan poses. We evaluate our approach in multiple experiments by showing
qualitative results. Furthermore, we quantify the map quality by an
entropy-based measure.Comment: In: Proceedings of the International Conference on Robotics and
Automation (ICRA) 201
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