7,530 research outputs found
Searching for network modules
When analyzing complex networks a key target is to uncover their modular
structure, which means searching for a family of modules, namely node subsets
spanning each a subnetwork more densely connected than the average. This work
proposes a novel type of objective function for graph clustering, in the form
of a multilinear polynomial whose coefficients are determined by network
topology. It may be thought of as a potential function, to be maximized, taking
its values on fuzzy clusterings or families of fuzzy subsets of nodes over
which every node distributes a unit membership. When suitably parametrized,
this potential is shown to attain its maximum when every node concentrates its
all unit membership on some module. The output thus is a partition, while the
original discrete optimization problem is turned into a continuous version
allowing to conceive alternative search strategies. The instance of the problem
being a pseudo-Boolean function assigning real-valued cluster scores to node
subsets, modularity maximization is employed to exemplify a so-called quadratic
form, in that the scores of singletons and pairs also fully determine the
scores of larger clusters, while the resulting multilinear polynomial potential
function has degree 2. After considering further quadratic instances, different
from modularity and obtained by interpreting network topology in alternative
manners, a greedy local-search strategy for the continuous framework is
analytically compared with an existing greedy agglomerative procedure for the
discrete case. Overlapping is finally discussed in terms of multiple runs, i.e.
several local searches with different initializations.Comment: 10 page
Resolving structural variability in network models and the brain
Large-scale white matter pathways crisscrossing the cortex create a complex
pattern of connectivity that underlies human cognitive function. Generative
mechanisms for this architecture have been difficult to identify in part
because little is known about mechanistic drivers of structured networks. Here
we contrast network properties derived from diffusion spectrum imaging data of
the human brain with 13 synthetic network models chosen to probe the roles of
physical network embedding and temporal network growth. We characterize both
the empirical and synthetic networks using familiar diagnostics presented in
statistical form, as scatter plots and distributions, to reveal the full range
of variability of each measure across scales in the network. We focus on the
degree distribution, degree assortativity, hierarchy, topological Rentian
scaling, and topological fractal scaling---in addition to several summary
statistics, including the mean clustering coefficient, shortest path length,
and network diameter. The models are investigated in a progressive, branching
sequence, aimed at capturing different elements thought to be important in the
brain, and range from simple random and regular networks, to models that
incorporate specific growth rules and constraints. We find that synthetic
models that constrain the network nodes to be embedded in anatomical brain
regions tend to produce distributions that are similar to those extracted from
the brain. We also find that network models hardcoded to display one network
property do not in general also display a second, suggesting that multiple
neurobiological mechanisms might be at play in the development of human brain
network architecture. Together, the network models that we develop and employ
provide a potentially useful starting point for the statistical inference of
brain network structure from neuroimaging data.Comment: 24 pages, 11 figures, 1 table, supplementary material
Distributed Estimation and Control of Algebraic Connectivity over Random Graphs
In this paper we propose a distributed algorithm for the estimation and
control of the connectivity of ad-hoc networks in the presence of a random
topology. First, given a generic random graph, we introduce a novel stochastic
power iteration method that allows each node to estimate and track the
algebraic connectivity of the underlying expected graph. Using results from
stochastic approximation theory, we prove that the proposed method converges
almost surely (a.s.) to the desired value of connectivity even in the presence
of imperfect communication scenarios. The estimation strategy is then used as a
basic tool to adapt the power transmitted by each node of a wireless network,
in order to maximize the network connectivity in the presence of realistic
Medium Access Control (MAC) protocols or simply to drive the connectivity
toward a desired target value. Numerical results corroborate our theoretical
findings, thus illustrating the main features of the algorithm and its
robustness to fluctuations of the network graph due to the presence of random
link failures.Comment: To appear in IEEE Transactions on Signal Processin
Node Embedding over Temporal Graphs
In this work, we present a method for node embedding in temporal graphs. We
propose an algorithm that learns the evolution of a temporal graph's nodes and
edges over time and incorporates this dynamics in a temporal node embedding
framework for different graph prediction tasks. We present a joint loss
function that creates a temporal embedding of a node by learning to combine its
historical temporal embeddings, such that it optimizes per given task (e.g.,
link prediction). The algorithm is initialized using static node embeddings,
which are then aligned over the representations of a node at different time
points, and eventually adapted for the given task in a joint optimization. We
evaluate the effectiveness of our approach over a variety of temporal graphs
for the two fundamental tasks of temporal link prediction and multi-label node
classification, comparing to competitive baselines and algorithmic
alternatives. Our algorithm shows performance improvements across many of the
datasets and baselines and is found particularly effective for graphs that are
less cohesive, with a lower clustering coefficient
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