Self-Assembly of Infinite Structures

We review some recent results related to the self-assembly of infinite structures in the Tile Assembly Model. These results include impossibility results, as well as novel tile assembly systems in which shapes and patterns that represent various notions of computation self-assemble. Several open questions are also presented and motivated

Normal forms for Answer Sets Programming

Normal forms for logic programs under stable/answer set semantics are introduced. We argue that these forms can simplify the study of program properties, mainly consistency. The first normal form, called the {\em kernel} of the program, is useful for studying existence and number of answer sets. A kernel program is composed of the atoms which are undefined in the Well-founded semantics, which are those that directly affect the existence of answer sets. The body of rules is composed of negative literals only. Thus, the kernel form tends to be significantly more compact than other formulations. Also, it is possible to check consistency of kernel programs in terms of colorings of the Extended Dependency Graph program representation which we previously developed. The second normal form is called {\em 3-kernel.} A 3-kernel program is composed of the atoms which are undefined in the Well-founded semantics. Rules in 3-kernel programs have at most two conditions, and each rule either belongs to a cycle, or defines a connection between cycles. 3-kernel programs may have positive conditions. The 3-kernel normal form is very useful for the static analysis of program consistency, i.e., the syntactic characterization of existence of answer sets. This result can be obtained thanks to a novel graph-like representation of programs, called Cycle Graph which presented in the companion article \cite{Cos04b}.Comment: 15 pages, To appear in Theory and Practice of Logic Programming (TPLP

Approximate Computation and Implicit Regularization for Very Large-scale Data Analysis

Database theory and database practice are typically the domain of computer scientists who adopt what may be termed an algorithmic perspective on their data. This perspective is very different than the more statistical perspective adopted by statisticians, scientific computers, machine learners, and other who work on what may be broadly termed statistical data analysis. In this article, I will address fundamental aspects of this algorithmic-statistical disconnect, with an eye to bridging the gap between these two very different approaches. A concept that lies at the heart of this disconnect is that of statistical regularization, a notion that has to do with how robust is the output of an algorithm to the noise properties of the input data. Although it is nearly completely absent from computer science, which historically has taken the input data as given and modeled algorithms discretely, regularization in one form or another is central to nearly every application domain that applies algorithms to noisy data. By using several case studies, I will illustrate, both theoretically and empirically, the nonobvious fact that approximate computation, in and of itself, can implicitly lead to statistical regularization. This and other recent work suggests that, by exploiting in a more principled way the statistical properties implicit in worst-case algorithms, one can in many cases satisfy the bicriteria of having algorithms that are scalable to very large-scale databases and that also have good inferential or predictive properties.Comment: To appear in the Proceedings of the 2012 ACM Symposium on Principles of Database Systems (PODS 2012

On the topological aspects of the theory of represented spaces

Represented spaces form the general setting for the study of computability derived from Turing machines. As such, they are the basic entities for endeavors such as computable analysis or computable measure theory. The theory of represented spaces is well-known to exhibit a strong topological flavour. We present an abstract and very succinct introduction to the field; drawing heavily on prior work by Escard\'o, Schr\"oder, and others. Central aspects of the theory are function spaces and various spaces of subsets derived from other represented spaces, and -- closely linked to these -- properties of represented spaces such as compactness, overtness and separation principles. Both the derived spaces and the properties are introduced by demanding the computability of certain mappings, and it is demonstrated that typically various interesting mappings induce the same property.Comment: Earlier versions were titled "Compactness and separation for represented spaces" and "A new introduction to the theory of represented spaces