Experimental Evaluation of Book Drawing Algorithms

A $k$-page book drawing of a graph $G=(V,E)$ consists of a linear ordering of its vertices along a spine and an assignment of each edge to one of the $k$ pages, which are half-planes bounded by the spine. In a book drawing, two edges cross if and only if they are assigned to the same page and their vertices alternate along the spine. Crossing minimization in a $k$-page book drawing is NP-hard, yet book drawings have multiple applications in visualization and beyond. Therefore several heuristic book drawing algorithms exist, but there is no broader comparative study on their relative performance. In this paper, we propose a comprehensive benchmark set of challenging graph classes for book drawing algorithms and provide an extensive experimental study of the performance of existing book drawing algorithms.Comment: Appears in the Proceedings of the 25th International Symposium on Graph Drawing and Network Visualization (GD 2017

Graph-RAT: Combining data sources in music recommendation systems

The complexity of music recommendation systems has increased rapidly in recent years, drawing upon different sources of information: content analysis, web-mining, social tagging, etc. Unfortunately, the tools to scientifically evaluate such integrated systems are not readily available; nor are the base algorithms available. This article describes Graph-RAT (Graph-based Relational Analysis Toolkit), an open source toolkit that provides a framework for developing and evaluating novel hybrid systems. While this toolkit is designed for music recommendation, it has applications outside its discipline as well. An experiment—indicative of the sort of procedure that can be configured using the toolkit—is provided to illustrate its usefulness

Layout of Graphs with Bounded Tree-Width

A \emph{queue layout} of a graph consists of a total order of the vertices, and a partition of the edges into \emph{queues}, such that no two edges in the same queue are nested. The minimum number of queues in a queue layout of a graph is its \emph{queue-number}. A \emph{three-dimensional (straight-line grid) drawing} of a graph represents the vertices by points in $\mathbb{Z}^3$ and the edges by non-crossing line-segments. This paper contributes three main results: (1) It is proved that the minimum volume of a certain type of three-dimensional drawing of a graph $G$ is closely related to the queue-number of $G$. In particular, if $G$ is an $n$-vertex member of a proper minor-closed family of graphs (such as a planar graph), then $G$ has a $O(1)\times O(1)\times O(n)$ drawing if and only if $G$ has O(1) queue-number. (2) It is proved that queue-number is bounded by tree-width, thus resolving an open problem due to Ganley and Heath (2001), and disproving a conjecture of Pemmaraju (1992). This result provides renewed hope for the positive resolution of a number of open problems in the theory of queue layouts. (3) It is proved that graphs of bounded tree-width have three-dimensional drawings with O(n) volume. This is the most general family of graphs known to admit three-dimensional drawings with O(n) volume. The proofs depend upon our results regarding \emph{track layouts} and \emph{tree-partitions} of graphs, which may be of independent interest.Comment: This is a revised version of a journal paper submitted in October 2002. This paper incorporates the following conference papers: (1) Dujmovic', Morin & Wood. Path-width and three-dimensional straight-line grid drawings of graphs (GD'02), LNCS 2528:42-53, Springer, 2002. (2) Wood. Queue layouts, tree-width, and three-dimensional graph drawing (FSTTCS'02), LNCS 2556:348--359, Springer, 2002. (3) Dujmovic' & Wood. Tree-partitions of $k$-trees with applications in graph layout (WG '03), LNCS 2880:205-217, 200

The structure and the list 3-dynamic coloring of outer-1-planar graphs

An outer-1-planar graph is a graph admitting a drawing in the plane so that all vertices appear in the outer region of the drawing and every edge crosses at most one other edge. This paper establishes the local structure of outer-1-planar graphs by proving that each outer-1-planar graph contains one of the seventeen fixed configurations, and the list of those configurations is minimal in the sense that for each fixed configuration there exist outer-1-planar graphs containing this configuration that do not contain any of another sixteen configurations. There are two interesting applications of this structural theorem. First of all, we conclude that every (resp.maximal) outer-1-planar graph of minimum degree at least 2 has an edge with the sum of the degrees of its two end-vertices being at most 9 (resp.7), and this upper bound is sharp. On the other hand, we show that the list 3-dynamic chromatic number of every outer-1-planar graph is at most 6, and this upper bound is best possible

ImPrEd: An Improved Force-Directed Algorithm that Prevents Nodes from Crossing Edges

International audiencePrEd is a force-directed algorithm that improves the existing layout of a graph while preserving its edge crossing properties. The algorithm has a number of applications including: improving the layouts of planar graph drawing algorithms, interacting with a graph layout, and drawing Euler-like diagrams. The algorithm ensures that nodes do not cross edges during its execution. However, PrEd can be computationally expensive and overly-restrictive in terms of node movement. In this paper, we introduce ImPrEd: an improved version of PrEd that overcomes some of its limitations and widens its range of applicability. ImPrEd also adds features such as flexible or crossable edges, allowing for greater control over the output. Flexible edges, in particular, can improve the distribution of graph elements and the angular resolution of the input graph. They can also be used to generate Euler diagrams with smooth boundaries. As flexible edges increase data set size, we experience an execution/drawing quality trade off. However, when flexible edges are not used, ImPrEd proves to be consistently faster than PrEd

The role of twins in computing planar supports of hypergraphs

A support or realization of a hypergraph $H$ is a graph $G$ on the same vertex as $H$ such that for each hyperedge of $H$ it holds that its vertices induce a connected subgraph of $G$. The NP-hard problem of finding a planar} support has applications in hypergraph drawing and network design. Previous algorithms for the problem assume that twins}---pairs of vertices that are in precisely the same hyperedges---can safely be removed from the input hypergraph. We prove that this assumption is generally wrong, yet that the number of twins necessary for a hypergraph to have a planar support only depends on its number of hyperedges. We give an explicit upper bound on the number of twins necessary for a hypergraph with $m$ hyperedges to have an $r$-outerplanar support, which depends only on $r$ and $m$. Since all additional twins can be safely removed, we obtain a linear-time algorithm for computing $r$-outerplanar supports for hypergraphs with $m$ hyperedges if $m$ and $r$ are constant; in other words, the problem is fixed-parameter linear-time solvable with respect to the parameters $m$ and $r$