The random subgraph model for the analysis of an ecclesiastical network in Merovingian Gaul

In the last two decades many random graph models have been proposed to extract knowledge from networks. Most of them look for communities or, more generally, clusters of vertices with homogeneous connection profiles. While the first models focused on networks with binary edges only, extensions now allow to deal with valued networks. Recently, new models were also introduced in order to characterize connection patterns in networks through mixed memberships. This work was motivated by the need of analyzing a historical network where a partition of the vertices is given and where edges are typed. A known partition is seen as a decomposition of a network into subgraphs that we propose to model using a stochastic model with unknown latent clusters. Each subgraph has its own mixing vector and sees its vertices associated to the clusters. The vertices then connect with a probability depending on the subgraphs only, while the types of edges are assumed to be sampled from the latent clusters. A variational Bayes expectation-maximization algorithm is proposed for inference as well as a model selection criterion for the estimation of the cluster number. Experiments are carried out on simulated data to assess the approach. The proposed methodology is then applied to an ecclesiastical network in Merovingian Gaul. An R code, called Rambo, implementing the inference algorithm is available from the authors upon request.Comment: Published in at http://dx.doi.org/10.1214/13-AOAS691 the Annals of Applied Statistics (http://www.imstat.org/aoas/) by the Institute of Mathematical Statistics (http://www.imstat.org

Embedding Graphs under Centrality Constraints for Network Visualization

Visual rendering of graphs is a key task in the mapping of complex network data. Although most graph drawing algorithms emphasize aesthetic appeal, certain applications such as travel-time maps place more importance on visualization of structural network properties. The present paper advocates two graph embedding approaches with centrality considerations to comply with node hierarchy. The problem is formulated first as one of constrained multi-dimensional scaling (MDS), and it is solved via block coordinate descent iterations with successive approximations and guaranteed convergence to a KKT point. In addition, a regularization term enforcing graph smoothness is incorporated with the goal of reducing edge crossings. A second approach leverages the locally-linear embedding (LLE) algorithm which assumes that the graph encodes data sampled from a low-dimensional manifold. Closed-form solutions to the resulting centrality-constrained optimization problems are determined yielding meaningful embeddings. Experimental results demonstrate the efficacy of both approaches, especially for visualizing large networks on the order of thousands of nodes.Comment: Submitted to IEEE Transactions on Visualization and Computer Graphic

Small-world networks, distributed hash tables and the e-resource discovery problem

Resource discovery is one of the most important underpinning problems behind producing a scalable, robust and efficient global infrastructure for e-Science. A number of approaches to the resource discovery and management problem have been made in various computational grid environments and prototypes over the last decade. Computational resources and services in modern grid and cloud environments can be modelled as an overlay network superposed on the physical network structure of the Internet and World Wide Web. We discuss some of the main approaches to resource discovery in the context of the general properties of such an overlay network. We present some performance data and predicted properties based on algorithmic approaches such as distributed hash table resource discovery and management. We describe a prototype system and use its model to explore some of the known key graph aspects of the global resource overlay network - including small-world and scale-free properties