Leveraging Machine Learning Techniques towards Intelligent Networking Automation

In this thesis, we address some of the challenges that the Intelligent Networking Automation (INA) paradigm poses. Our goal is to design schemes leveraging Machine Learning (ML) techniques to cope with situations that involve hard decision-making actions. The proposed solutions are data-driven and consist of an agent that operates at network elements such as routers, switches, or network servers. The data are gathered from realistic scenarios, either actual network deployments or emulated environments. To evaluate the enhancements that the designed schemes provide, we compare our solutions to non-intelligent ones. Additionally, we assess the trade-off between the obtained improvements and the computational costs of implementing the proposed mechanisms. Accordingly, this thesis tackles the challenges that four specific research problems present. The first topic addresses the problem of balancing traffic in dense Internet of Things (IoT) network scenarios where the end devices and the Base Stations (BSs) form complex networks. By applying ML techniques to discover patterns in the association between the end devices and the BSs, the proposed scheme can balance the traffic load in a IoT network to increase the packet delivery ratio and reduce the energy cost of data delivery. The second research topic proposes an intelligent congestion control for internet connections at edge network elements. The design includes a congestion predictor based on an Artificial Neural Network (ANN) and an Active Queue Management (AQM) parameter tuner. Similarly, the third research topic includes an intelligent solution to the inter-domain congestion. Different from second topic, this problem considers the preservation of the private network data by means of Federated Learning (FL), since network elements of several organizations participate in the intelligent process. Finally, the fourth research topic refers to a framework to efficiently gathering network telemetry (NT) data. The proposed solution considers a traffic-aware approach so that the NT is intelligently collected and transmitted by the network elements. All the proposed schemes are evaluated through use cases considering standardized networking mechanisms. Therefore, we envision that the solutions of these specific problems encompass a set of methods that can be utilized in real-world scenarios towards the realization of the INA paradigm

Evolutionary genomics : statistical and computational methods

This open access book addresses the challenge of analyzing and understanding the evolutionary dynamics of complex biological systems at the genomic level, and elaborates on some promising strategies that would bring us closer to uncovering of the vital relationships between genotype and phenotype. After a few educational primers, the book continues with sections on sequence homology and alignment, phylogenetic methods to study genome evolution, methodologies for evaluating selective pressures on genomic sequences as well as genomic evolution in light of protein domain architecture and transposable elements, population genomics and other omics, and discussions of current bottlenecks in handling and analyzing genomic data. Written for the highly successful Methods in Molecular Biology series, chapters include the kind of detail and expert implementation advice that lead to the best results. Authoritative and comprehensive, Evolutionary Genomics: Statistical and Computational Methods, Second Edition aims to serve both novices in biology with strong statistics and computational skills, and molecular biologists with a good grasp of standard mathematical concepts, in moving this important field of study forward

Evolutionary Genomics

This open access book addresses the challenge of analyzing and understanding the evolutionary dynamics of complex biological systems at the genomic level, and elaborates on some promising strategies that would bring us closer to uncovering of the vital relationships between genotype and phenotype. After a few educational primers, the book continues with sections on sequence homology and alignment, phylogenetic methods to study genome evolution, methodologies for evaluating selective pressures on genomic sequences as well as genomic evolution in light of protein domain architecture and transposable elements, population genomics and other omics, and discussions of current bottlenecks in handling and analyzing genomic data. Written for the highly successful Methods in Molecular Biology series, chapters include the kind of detail and expert implementation advice that lead to the best results. Authoritative and comprehensive, Evolutionary Genomics: Statistical and Computational Methods, Second Edition aims to serve both novices in biology with strong statistics and computational skills, and molecular biologists with a good grasp of standard mathematical concepts, in moving this important field of study forward