Euclidean distance geometry and applications

Euclidean distance geometry is the study of Euclidean geometry based on the concept of distance. This is useful in several applications where the input data consists of an incomplete set of distances, and the output is a set of points in Euclidean space that realizes the given distances. We survey some of the theory of Euclidean distance geometry and some of the most important applications: molecular conformation, localization of sensor networks and statics.Comment: 64 pages, 21 figure

Extremal Properties of Three Dimensional Sensor Networks with Applications

In this paper, we analyze various critical transmitting/sensing ranges for connectivity and coverage in three-dimensional sensor networks. As in other large-scale complex systems, many global parameters of sensor networks undergo phase transitions: For a given property of the network, there is a critical threshold, corresponding to the minimum amount of the communication effort or power expenditure by individual nodes, above (resp. below) which the property exists with high (resp. a low) probability. For sensor networks, properties of interest include simple and multiple degrees of connectivity/coverage. First, we investigate the network topology according to the region of deployment, the number of deployed sensors and their transmitting/sensing ranges. More specifically, we consider the following problems: Assume that $n$ nodes, each capable of sensing events within a radius of $r$, are randomly and uniformly distributed in a 3-dimensional region $\mathcal{R}$ of volume $V$, how large must the sensing range be to ensure a given degree of coverage of the region to monitor? For a given transmission range, what is the minimum (resp. maximum) degree of the network? What is then the typical hop-diameter of the underlying network? Next, we show how these results affect algorithmic aspects of the network by designing specific distributed protocols for sensor networks

Spatial networks with wireless applications

Many networks have nodes located in physical space, with links more common between closely spaced pairs of nodes. For example, the nodes could be wireless devices and links communication channels in a wireless mesh network. We describe recent work involving such networks, considering effects due to the geometry (convex,non-convex, and fractal), node distribution, distance-dependent link probability, mobility, directivity and interference.Comment: Review article- an amended version with a new title from the origina

Exact Computation of a Manifold Metric, via Lipschitz Embeddings and Shortest Paths on a Graph

Data-sensitive metrics adapt distances locally based the density of data points with the goal of aligning distances and some notion of similarity. In this paper, we give the first exact algorithm for computing a data-sensitive metric called the nearest neighbor metric. In fact, we prove the surprising result that a previously published $3$-approximation is an exact algorithm. The nearest neighbor metric can be viewed as a special case of a density-based distance used in machine learning, or it can be seen as an example of a manifold metric. Previous computational research on such metrics despaired of computing exact distances on account of the apparent difficulty of minimizing over all continuous paths between a pair of points. We leverage the exact computation of the nearest neighbor metric to compute sparse spanners and persistent homology. We also explore the behavior of the metric built from point sets drawn from an underlying distribution and consider the more general case of inputs that are finite collections of path-connected compact sets. The main results connect several classical theories such as the conformal change of Riemannian metrics, the theory of positive definite functions of Schoenberg, and screw function theory of Schoenberg and Von Neumann. We develop novel proof techniques based on the combination of screw functions and Lipschitz extensions that may be of independent interest.Comment: 15 page