A Seeded Genetic Algorithm for RNA Secondary Structural Prediction with Pseudoknots

This work explores a new approach in using genetic algorithm to predict RNA secondary structures with pseudoknots. Since only a small portion of most RNA structures is comprised of pseudoknots, the majority of structural elements from an optimal pseudoknot-free structure are likely to be part of the true structure. Thus seeding the genetic algorithm with optimal pseudoknot-free structures will more likely lead it to the true structure than a randomly generated population. The genetic algorithm uses the known energy models with an additional augmentation to allow complex pseudoknots. The nearest-neighbor energy model is used in conjunction with Turner’s thermodynamic parameters for pseudoknot-free structures, and the H-type pseudoknot energy estimation for simple pseudoknots. Testing with known pseudoknot sequences from PseudoBase shows that it out performs some of the current popular algorithms

Optimization of windspeed prediction using an artificial neural network compared with a genetic programming model

The precise prediction of windspeed is essential in order to improve and optimize wind power prediction. However, due to the sporadic and inherent complexity of weather parameters, the prediction of windspeed data using different patterns is difficult. Machine learning (ML) is a powerful tool to deal with uncertainty and has been widely discussed and applied in renewable energy forecasting. In this chapter, the authors present and compare an artificial neural network (ANN) and genetic programming (GP) model as a tool to predict windspeed of 15 locations in Queensland, Australia. After performing feature selection using neighborhood component analysis (NCA) from 11 different metrological parameters, seven of the most important predictor variables were chosen for 85 Queensland locations, 60 of which were used for training the model, 10 locations for model validation, and 15 locations for the model testing. For all 15 target sites, the testing performance of ANN was significantly superior to the GP model

Review and Comparison of Intelligent Optimization Modelling Techniques for Energy Forecasting and Condition-Based Maintenance in PV Plants

Within the field of soft computing, intelligent optimization modelling techniques include various major techniques in artificial intelligence. These techniques pretend to generate new business knowledge transforming sets of "raw data" into business value. One of the principal applications of these techniques is related to the design of predictive analytics for the improvement of advanced CBM (condition-based maintenance) strategies and energy production forecasting. These advanced techniques can be used to transform control system data, operational data and maintenance event data to failure diagnostic and prognostic knowledge and, ultimately, to derive expected energy generation. One of the systems where these techniques can be applied with massive potential impact are the legacy monitoring systems existing in solar PV energy generation plants. These systems produce a great amount of data over time, while at the same time they demand an important e ort in order to increase their performance through the use of more accurate predictive analytics to reduce production losses having a direct impact on ROI. How to choose the most suitable techniques to apply is one of the problems to address. This paper presents a review and a comparative analysis of six intelligent optimization modelling techniques, which have been applied on a PV plant case study, using the energy production forecast as the decision variable. The methodology proposed not only pretends to elicit the most accurate solution but also validates the results, in comparison with the di erent outputs for the di erent techniques

Optimisation of Mobile Communication Networks - OMCO NET

The mini conference “Optimisation of Mobile Communication Networks” focuses on advanced methods for search and optimisation applied to wireless communication networks. It is sponsored by Research & Enterprise Fund Southampton Solent University. The conference strives to widen knowledge on advanced search methods capable of optimisation of wireless communications networks. The aim is to provide a forum for exchange of recent knowledge, new ideas and trends in this progressive and challenging area. The conference will popularise new successful approaches on resolving hard tasks such as minimisation of transmit power, cooperative and optimal routing

A machine learning approach

Castelli, M., Groznik, A., & Popovič, A. (2020). Forecasting electricity prices: A machine learning approach. Algorithms, 13(5), 1-16. [119]. https://doi.org/10.3390/A13050119The electricity market is a complex, evolutionary, and dynamic environment. Forecasting electricity prices is an important issue for all electricity market participants. In this study, we shed light on how to improve electricity price forecasting accuracy through the use of a machine learning technique-namely, a novel genetic programming approach. Drawing on empirical data from the largest EU energy markets, we propose a forecasting model that considers variables related to weather conditions, oil prices, and CO2 coupons and predicts energy prices 24 h ahead. We show that the proposed model provides more accurate predictions of future electricity prices than existing prediction methods. Our important findings will assist the electricity market participants in forecasting future price movements.publishersversionpublishe

Modeling and analysis of actual evapotranspiration using data driven and wavelet techniques

Large-scale mining practices have disturbed many natural watersheds in northern Alberta, Canada. To restore disturbed landscapes and ecosystems’ functions, reconstruction strategies have been adopted with the aim of establishing sustainable reclaimed lands. The success of the reconstruction process depends on the design of reconstruction strategies, which can be optimized by improving the understanding of the controlling hydrological processes in the reconstructed watersheds. Evapotranspiration is one of the important components of the hydrological cycle; its estimation and analysis are crucial for better assessment of the reconstructed landscape hydrology, and for more efficient design. The complexity of the evapotranspiration process and its variability in time and space has imposed some limitations on previously developed evapotranspiration estimation models. The vast majority of the available models estimate the rate of potential evapotranspiration, which occurs under unlimited water supply condition. However, the rate of actual evapotranspiration (AET) depends on the available soil moisture, which makes its physical modeling more complicated than the potential evapotranspiration. The main objective of this study is to estimate and analyze the AET process in a reconstructed landscape. Data driven techniques can model the process without having a complete understanding of its physics. In this study, three data driven models; genetic programming (GP), artificial neural networks (ANNs), and multilinear regression (MLR), were developed and compared for estimating the hourly eddy covariance (EC)-measured AET using meteorological variables. The AET was modeled as a function of five meteorological variables: net radiation (Rn), ground temperature (Tg), air temperature (Ta), relative humidity (RH), and wind speed (Ws) in a reconstructed landscape located in northern Alberta, Canada. Several ANN models were evaluated using two training algorithms of Levenberg-Marquardt and Bayesian regularization. The GP technique was employed to generate mathematical equations correlating AET to the five meteorological variables. Furthermore, the available data were statistically analyzed to obtain MLR models and to identify the meteorological variables that have significant effect on the evapotranspiration process. The utility of the investigated data driven models was also compared with that of HYDRUS-1D model, which is a physically based model that makes use of conventional Penman-Monteith (PM) method for the prediction of AET. HYDRUS-1D model was examined for estimating AET using meteorological variables, leaf area index, and soil moisture information. Furthermore, Wavelet analysis (WA), as a multiresolution signal processing tool, was examined to improve the understanding of the available time series temporal variations, through identifying the significant cyclic features, and to explore the possible correlation between AET and the meteorological signals. WA was used with the purpose of input determination of AET models, a priori. The results of this study indicated that all three proposed data driven models were able to approximate the AET reasonably well; however, GP and MLR models had better generalization ability than the ANN model. GP models demonstrated that the complex process of hourly AET can be efficiently modeled as simple semi-linear functions of few meteorological variables. The results of HYDRUS-1D model exhibited that a physically based model, such as HYDRUS-1D, might perform on par or even inferior to the data driven models in terms of the overall prediction accuracy. The developed equation-based models; GP and MLR, revealed the larger contribution of net radiation and ground temperature, compared to other variables, to the estimation of AET. It was also found that the interaction effects of meteorological variables are important for the AET modeling. The results of wavelet analysis demonstrated the presence of both small-scale (2 to 8 hours) and larger-scale (e.g. diurnal) cyclic features in most of the investigated time series. Larger-scale cyclic features were found to be the dominant source of temporal variations in the AET and most of the meteorological variables. The results of cross wavelet analysis indicated that the cause and effect relationship between AET and the meteorological variables might vary based on the time-scale of variation under consideration. At small time-scales, significant linear correlations were observed between AET and Rn, RH, and Ws time series, while at larger time-scales significant linear correlations were observed between AET and Rn, RH, Tg, and Ta time series