Stateful Testing: Finding More Errors in Code and Contracts

Automated random testing has shown to be an effective approach to finding faults but still faces a major unsolved issue: how to generate test inputs diverse enough to find many faults and find them quickly. Stateful testing, the automated testing technique introduced in this article, generates new test cases that improve an existing test suite. The generated test cases are designed to violate the dynamically inferred contracts (invariants) characterizing the existing test suite. As a consequence, they are in a good position to detect new errors, and also to improve the accuracy of the inferred contracts by discovering those that are unsound. Experiments on 13 data structure classes totalling over 28,000 lines of code demonstrate the effectiveness of stateful testing in improving over the results of long sessions of random testing: stateful testing found 68.4% new errors and improved the accuracy of automatically inferred contracts to over 99%, with just a 7% time overhead.Comment: 11 pages, 3 figure

gMark: Schema-Driven Generation of Graphs and Queries

Massive graph data sets are pervasive in contemporary application domains. Hence, graph database systems are becoming increasingly important. In the experimental study of these systems, it is vital that the research community has shared solutions for the generation of database instances and query workloads having predictable and controllable properties. In this paper, we present the design and engineering principles of gMark, a domain- and query language-independent graph instance and query workload generator. A core contribution of gMark is its ability to target and control the diversity of properties of both the generated instances and the generated workloads coupled to these instances. Further novelties include support for regular path queries, a fundamental graph query paradigm, and schema-driven selectivity estimation of queries, a key feature in controlling workload chokepoints. We illustrate the flexibility and practical usability of gMark by showcasing the framework's capabilities in generating high quality graphs and workloads, and its ability to encode user-defined schemas across a variety of application domains.Comment: Accepted in November 2016. URL: http://ieeexplore.ieee.org/document/7762945/. in IEEE Transactions on Knowledge and Data Engineering 201

Expanding sensor networks to automate knowledge acquisition

The availability of accurate, low-cost sensors to scientists has resulted in widespread deployment in a variety of sporting and health environments. The sensor data output is often in a raw, proprietary or unstructured format. As a result, it is often difficult to query multiple sensors for complex properties or actions. In our research, we deploy a heterogeneous sensor network to detect the various biological and physiological properties in athletes during training activities. The goal for exercise physiologists is to quickly identify key intervals in exercise such as moments of stress or fatigue. This is not currently possible because of low level sensors and a lack of query language support. Thus, our motivation is to expand the sensor network with a contextual layer that enriches raw sensor data, so that it can be exploited by a high level query language. To achieve this, the domain expert specifies events in a tradiational event-condition-action format to deliver the required contextual enrichment

Grid infrastructures for secure access to and use of bioinformatics data: experiences from the BRIDGES project

The BRIDGES project was funded by the UK Department of Trade and Industry (DTI) to address the needs of cardiovascular research scientists investigating the genetic causes of hypertension as part of the Wellcome Trust funded (£4.34M) cardiovascular functional genomics (CFG) project. Security was at the heart of the BRIDGES project and an advanced data and compute grid infrastructure incorporating latest grid authorisation technologies was developed and delivered to the scientists. We outline these grid infrastructures and describe the perceived security requirements at the project start including data classifications and how these evolved throughout the lifetime of the project. The uptake and adoption of the project results are also presented along with the challenges that must be overcome to support the secure exchange of life science data sets. We also present how we will use the BRIDGES experiences in future projects at the National e-Science Centre