Lyndon Array Construction during Burrows-Wheeler Inversion

In this paper we present an algorithm to compute the Lyndon array of a string $T$ of length $n$ as a byproduct of the inversion of the Burrows-Wheeler transform of $T$. Our algorithm runs in linear time using only a stack in addition to the data structures used for Burrows-Wheeler inversion. We compare our algorithm with two other linear-time algorithms for Lyndon array construction and show that computing the Burrows-Wheeler transform and then constructing the Lyndon array is competitive compared to the known approaches. We also propose a new balanced parenthesis representation for the Lyndon array that uses $2n+o(n)$ bits of space and supports constant time access. This representation can be built in linear time using $O(n)$ words of space, or in $O(n\log n/\log\log n)$ time using asymptotically the same space as $T$

Efficient indexing of necklaces and irreducible polynomials over finite fields

We study the problem of indexing irreducible polynomials over finite fields, and give the first efficient algorithm for this problem. Specifically, we show the existence of poly(n, log q)-size circuits that compute a bijection between {1, ... , |S|} and the set S of all irreducible, monic, univariate polynomials of degree n over a finite field F_q. This has applications in pseudorandomness, and answers an open question of Alon, Goldreich, H{\aa}stad and Peralta[AGHP]. Our approach uses a connection between irreducible polynomials and necklaces ( equivalence classes of strings under cyclic rotation). Along the way, we give the first efficient algorithm for indexing necklaces of a given length over a given alphabet, which may be of independent interest

Generation, Ranking and Unranking of Ordered Trees with Degree Bounds

We study the problem of generating, ranking and unranking of unlabeled ordered trees whose nodes have maximum degree of $\Delta$. This class of trees represents a generalization of chemical trees. A chemical tree is an unlabeled tree in which no node has degree greater than 4. By allowing up to $\Delta$ children for each node of chemical tree instead of 4, we will have a generalization of chemical trees. Here, we introduce a new encoding over an alphabet of size 4 for representing unlabeled ordered trees with maximum degree of $\Delta$. We use this encoding for generating these trees in A-order with constant average time and O(n) worst case time. Due to the given encoding, with a precomputation of size and time O(n^2) (assuming $\Delta$ is constant), both ranking and unranking algorithms are also designed taking O(n) and O(nlogn) time complexities.Comment: In Proceedings DCM 2015, arXiv:1603.0053