The Family of MapReduce and Large Scale Data Processing Systems

In the last two decades, the continuous increase of computational power has produced an overwhelming flow of data which has called for a paradigm shift in the computing architecture and large scale data processing mechanisms. MapReduce is a simple and powerful programming model that enables easy development of scalable parallel applications to process vast amounts of data on large clusters of commodity machines. It isolates the application from the details of running a distributed program such as issues on data distribution, scheduling and fault tolerance. However, the original implementation of the MapReduce framework had some limitations that have been tackled by many research efforts in several followup works after its introduction. This article provides a comprehensive survey for a family of approaches and mechanisms of large scale data processing mechanisms that have been implemented based on the original idea of the MapReduce framework and are currently gaining a lot of momentum in both research and industrial communities. We also cover a set of introduced systems that have been implemented to provide declarative programming interfaces on top of the MapReduce framework. In addition, we review several large scale data processing systems that resemble some of the ideas of the MapReduce framework for different purposes and application scenarios. Finally, we discuss some of the future research directions for implementing the next generation of MapReduce-like solutions.Comment: arXiv admin note: text overlap with arXiv:1105.4252 by other author

PRODUCTIVELY SCALING HARDWARE DESIGNS OVER INCREASING RESOURCES USING A SYSTEMATIC DESIGN ANALYSIS APPROACH

As processor development shifts from strict single core frequency scaling to het- erogeneous resource scaling two important considerations require evaluation. First, how to design systems with an increasing amount of heterogeneous resources, and second, how to maintain a designer’s productivity as the number of possible con- figurations grows. Therefore, it is necessary to determine what useful information can be gathered from existing designs to help predict or identify a design’s potential scalability, as well as, identifying which routine tasks can be automated to improve a designer’s productivity. Moreover, once this information is collected, how can this information be conveyed to the designer such that it can be used to increase overall productivity when implementing the design over increasing amounts of resources? This research looks at various approaches to analyze designs and attempts to distribute an application efficiently across a heterogeneous cluster of computing re- sources through the use of a Systematic Design Analysis flow and an assortment of productivity tools. These tools provide the designer with projections on the amount of resources needed to scale an existing design to a specified performance, as well as, projecting the performance based on a specified amount of resources. This is accomplished through the combination of static HDL profiling, component synthesis resource utilization, and runtime performance monitoring. For evaluation, four case studies are presented to demonstrate the proposed flow’s scalability on a small scale cluster of FPGAs. The results are highly favorable, providing orders of magnitude speedup with minimal intervention from the designer

Low-Impact Profiling of Streaming, Heterogeneous Applications

Computer engineers are continually faced with the task of translating improvements in fabrication process technology: i.e., Moore\u27s Law) into architectures that allow computer scientists to accelerate application performance. As feature-size continues to shrink, architects of commodity processors are designing increasingly more cores on a chip. While additional cores can operate independently with some tasks: e.g. the OS and user tasks), many applications see little to no improvement from adding more processor cores alone. For many applications, heterogeneous systems offer a path toward higher performance. Significant performance and power gains have been realized by combining specialized processors: e.g., Field-Programmable Gate Arrays, Graphics Processing Units) with general purpose multi-core processors. Heterogeneous applications need to be programmed differently than traditional software. One approach, stream processing, fits these systems particularly well because of the segmented memories and explicit expression of parallelism. Unfortunately, debugging and performance tools that support streaming, heterogeneous applications do not exist. This dissertation presents TimeTrial, a performance measurement system that enables performance optimization of streaming applications by profiling the application deployed on a heterogeneous system. TimeTrial performs low-impact measurements by dedicating computing resources to monitoring and by aggressively compressing performance traces into statistical summaries guided by user specification of the performance queries of interest

PyCUDA and PyOpenCL: A Scripting-Based Approach to GPU Run-Time Code Generation

High-performance computing has recently seen a surge of interest in heterogeneous systems, with an emphasis on modern Graphics Processing Units (GPUs). These devices offer tremendous potential for performance and efficiency in important large-scale applications of computational science. However, exploiting this potential can be challenging, as one must adapt to the specialized and rapidly evolving computing environment currently exhibited by GPUs. One way of addressing this challenge is to embrace better techniques and develop tools tailored to their needs. This article presents one simple technique, GPU run-time code generation (RTCG), along with PyCUDA and PyOpenCL, two open-source toolkits that support this technique. In introducing PyCUDA and PyOpenCL, this article proposes the combination of a dynamic, high-level scripting language with the massive performance of a GPU as a compelling two-tiered computing platform, potentially offering significant performance and productivity advantages over conventional single-tier, static systems. The concept of RTCG is simple and easily implemented using existing, robust infrastructure. Nonetheless it is powerful enough to support (and encourage) the creation of custom application-specific tools by its users. The premise of the paper is illustrated by a wide range of examples where the technique has been applied with considerable success.Comment: Submitted to Parallel Computing, Elsevie

Energy-efficient hardware design based on high-level synthesis

This dissertation describes research activities broadly concerning the area of High-level synthesis (HLS), but more specifically, regarding the HLS-based design of energy-efficient hardware (HW) accelerators. HW accelerators, mostly implemented on FPGAs, are integral to the heterogeneous architectures employed in modern high performance computing (HPC) systems due to their ability to speed up the execution while dramatically reducing the energy consumption of computationally challenging portions of complex applications. Hence, the first activity was regarding an HLS-based approach to directly execute an OpenCL code on an FPGA instead of its traditional GPU-based counterpart. Modern FPGAs offer considerable computational capabilities while consuming significantly smaller power as compared to high-end GPUs. Several different implementations of the K-Nearest Neighbor algorithm were considered on both FPGA- and GPU-based platforms and their performance was compared. FPGAs were generally more energy-efficient than the GPUs in all the test cases. Eventually, we were also able to get a faster (in terms of execution time) FPGA implementation by using an FPGA-specific OpenCL coding style and utilizing suitable HLS directives. The second activity was targeted towards the development of a methodology complementing HLS to automatically derive power optimization directives (also known as "power intent") from a system-level design description and use it to drive the design steps after HLS, by producing a directive file written using the common power format (CPF) to achieve power shut-off (PSO) in case of an ASIC design. The proposed LP-HLS methodology reduces the design effort by enabling designers to infer low power information from the system-level description of a design rather than at the RTL. This methodology required a SystemC description of a generic power management module to describe the design context of a HW module also modeled in SystemC, along with the development of a tool to automatically produce the CPF file to accomplish PSO. Several test cases were considered to validate the proposed methodology and the results demonstrated its ability to correctly extract the low power information and apply it to achieve power optimization in the backend flow

A Modeling Approach based on UML/MARTE for GPU Architecture

Nowadays, the High Performance Computing is part of the context of embedded systems. Graphics Processing Units (GPUs) are more and more used in acceleration of the most part of algorithms and applications. Over the past years, not many efforts have been done to describe abstractions of applications in relation to their target architectures. Thus, when developers need to associate applications and GPUs, for example, they find difficulty and prefer using API for these architectures. This paper presents a metamodel extension for MARTE profile and a model for GPU architectures. The main goal is to specify the task and data allocation in the memory hierarchy of these architectures. The results show that this approach will help to generate code for GPUs based on model transformations using Model Driven Engineering (MDE).Comment: Symposium en Architectures nouvelles de machines (SympA'14) (2011

A Touch of Evil: High-Assurance Cryptographic Hardware from Untrusted Components

The semiconductor industry is fully globalized and integrated circuits (ICs) are commonly defined, designed and fabricated in different premises across the world. This reduces production costs, but also exposes ICs to supply chain attacks, where insiders introduce malicious circuitry into the final products. Additionally, despite extensive post-fabrication testing, it is not uncommon for ICs with subtle fabrication errors to make it into production systems. While many systems may be able to tolerate a few byzantine components, this is not the case for cryptographic hardware, storing and computing on confidential data. For this reason, many error and backdoor detection techniques have been proposed over the years. So far all attempts have been either quickly circumvented, or come with unrealistically high manufacturing costs and complexity. This paper proposes Myst, a practical high-assurance architecture, that uses commercial off-the-shelf (COTS) hardware, and provides strong security guarantees, even in the presence of multiple malicious or faulty components. The key idea is to combine protective-redundancy with modern threshold cryptographic techniques to build a system tolerant to hardware trojans and errors. To evaluate our design, we build a Hardware Security Module that provides the highest level of assurance possible with COTS components. Specifically, we employ more than a hundred COTS secure crypto-coprocessors, verified to FIPS140-2 Level 4 tamper-resistance standards, and use them to realize high-confidentiality random number generation, key derivation, public key decryption and signing. Our experiments show a reasonable computational overhead (less than 1% for both Decryption and Signing) and an exponential increase in backdoor-tolerance as more ICs are added