On variables with few occurrences in conjunctive normal forms

We consider the question of the existence of variables with few occurrences in boolean conjunctive normal forms (clause-sets). Let mvd(F) for a clause-set F denote the minimal variable-degree, the minimum of the number of occurrences of variables. Our main result is an upper bound mvd(F) <= nM(surp(F)) <= surp(F) + 1 + log_2(surp(F)) for lean clause-sets F in dependency on the surplus surp(F). - Lean clause-sets, defined as having no non-trivial autarkies, generalise minimally unsatisfiable clause-sets. - For the surplus we have surp(F) <= delta(F) = c(F) - n(F), using the deficiency delta(F) of clause-sets, the difference between the number of clauses and the number of variables. - nM(k) is the k-th "non-Mersenne" number, skipping in the sequence of natural numbers all numbers of the form 2^n - 1. We conjecture that this bound is nearly precise for minimally unsatisfiable clause-sets. As an application of the upper bound we obtain that (arbitrary!) clause-sets F with mvd(F) > nM(surp(F)) must have a non-trivial autarky (so clauses can be removed satisfiability-equivalently by an assignment satisfying some clauses and not touching the other clauses). It is open whether such an autarky can be found in polynomial time. As a future application we discuss the classification of minimally unsatisfiable clause-sets depending on the deficiency.Comment: 14 pages. Revision contains more explanations, and more information regarding the sharpness of the boun

Truth Degrees Theory and Approximate Reasoning in 3-Valued Propositional Pre-Rough Logic

By means of the function induced by a logical formula A, the concept of truth degree of the logical formula A is introduced in the 3-valued pre-rough logic in this paper. Moreover, similarity degrees among formulas are proposed and a pseudometric is defined on the set of formulas, and hence a possible framework suitable for developing approximate reasoning theory in 3-value logic pre-rough logic is established

A Coverage Criterion for Spaced Seeds and its Applications to Support Vector Machine String Kernels and k-Mer Distances

Spaced seeds have been recently shown to not only detect more alignments, but also to give a more accurate measure of phylogenetic distances (Boden et al., 2013, Horwege et al., 2014, Leimeister et al., 2014), and to provide a lower misclassification rate when used with Support Vector Machines (SVMs) (On-odera and Shibuya, 2013), We confirm by independent experiments these two results, and propose in this article to use a coverage criterion (Benson and Mak, 2008, Martin, 2013, Martin and No{\'e}, 2014), to measure the seed efficiency in both cases in order to design better seed patterns. We show first how this coverage criterion can be directly measured by a full automaton-based approach. We then illustrate how this criterion performs when compared with two other criteria frequently used, namely the single-hit and multiple-hit criteria, through correlation coefficients with the correct classification/the true distance. At the end, for alignment-free distances, we propose an extension by adopting the coverage criterion, show how it performs, and indicate how it can be efficiently computed.Comment: http://online.liebertpub.com/doi/abs/10.1089/cmb.2014.017

A Proof Theoretic View of Constraint Programming

We provide here a proof theoretic account of constraint programming that attempts to capture the essential ingredients of this programming style. We exemplify it by presenting proof rules for linear constraints over interval domains, and illustrate their use by analyzing the constraint propagation process for the {\tt SEND + MORE = MONEY} puzzle. We also show how this approach allows one to build new constraint solvers.Comment: 25 page